Unassigned Codons, Nonsense Suppression, and Anticodon Modifications in the Evolution of the Genetic Code Peter T. S. van der GulikWouter D. Hoff OriginalPaper 11 November 2011 Pages: 59 - 69
A Chimeric Chromosome in the Ciliate Oxytricha Resulting from Duplication Yi ZhouHelmae WubnehLaura F. Landweber Letter 22 October 2011 Pages: 70 - 73
Interspecific and Intragenic Differences in Codon Usage Bias Among Vertebrate Myosin Heavy-Chain Genes Mikio C. AoiBryan C. Rourke OriginalPaper 14 September 2011 Pages: 74 - 93
Selection and constraint on regulatory elements in Drosophila simulans Tami CruickshankPhil Nista OriginalPaper 09 September 2011 Pages: 94 - 100
A Conserved Regulatory Element in the Mammalian β-Globin Promoters Ryoiti KiyamaYuko Wada-Kiyama OriginalPaper 24 September 2011 Pages: 101 - 108
Prestin Shows Divergent Evolution Between Constant Frequency Echolocating Bats Bin ShenRafael Avila-FloresShuyi Zhang OriginalPaper 24 September 2011 Pages: 109 - 115
Reconstructing the Fungal Tree of Life Using Phylogenomics and a Preliminary Investigation of the Distribution of Yeast Prion-Like Proteins in the Fungal Kingdom Edgar M. MedinaGary W. JonesDavid A. Fitzpatrick OriginalPaper 22 September 2011 Pages: 116 - 133
Phylogenetic and Preliminary Phenotypic Analysis of Yeast PAQR Receptors: Potential Antifungal Targets Nancy Y. VillaPatricia MoussatcheThomas J. Lyons OriginalPaper Open access 19 October 2011 Pages: 134 - 152
Selection-Driven Divergence After Gene Duplication in Arabidopsis thaliana Toni I. GossmannKarl J. Schmid OriginalPaper 02 October 2011 Pages: 153 - 165
Amphiphilic α-Helical Potential: A Putative Folding Motif Adding Few Constraints to Protein Evolution S. Y. Ryan LeeWilliam Parker OriginalPaper 30 October 2011 Pages: 166 - 180
Ephemeral Association Between Gene CG5762 and Hybrid Male Sterility in Drosophila Sibling Species Daina MaPawel Michalak OriginalPaper 04 November 2011 Pages: 181 - 187
An Expansion of Age Constraints for Microbial Clades that Lack a Conventional Fossil Record Using Phylogenomic Dating Carrine E. Blank OriginalPaper 22 November 2011 Pages: 188 - 208
Evolution of the TOR Pathway Teunis J. P. van DamFried J. T. ZwartkruisBerend Snel OriginalPaper Open access 05 November 2011 Pages: 209 - 220
Self-Replication Reactions Dependent on Tertiary Interaction Motifs in an RNA Ligase Ribozyme Rei OhmoriHirohide SaitoTan Inoue OriginalPaper 12 November 2011 Pages: 221 - 229
Genome-Wide Comparative Analysis of pogo-Like Transposable Elements in Different Fusarium Species Marie DufresneOlivier LespinetAurélie Hua-Van OriginalPaper 18 November 2011 Pages: 230 - 243
Evaluating the Impact of Post-Mortem Damage in Ancient DNA: A Theoretical Approach Martyna MolakSimon Y. W. Ho OriginalPaper 20 November 2011 Pages: 244 - 255