Evolutionary Aspects of Selenium Binding Protein (SBP) Irene DervisiChrysanthi ValassakisAndreas Roussis Original Article Open access 11 April 2023 Pages: 471 - 481
A Possible Aquatic Origin of the Thiaminase TenA of the Human Gut Symbiont Bacteroides thetaiotaomicron Régis StentzJitender CheemaSimon R. Carding Original Article Open access 06 April 2023 Pages: 482 - 491
Analysis of Programmed Cell Death-1 (PD-1) Gene Variations (re11568821 and rs41386349) in HTLV-1 Infection Using One Primer Pair and Proviral Load Yalda Amiri HezaveZohreh SharifiFahime Ranjbar Kermani Original Article 05 April 2023 Pages: 562 - 566
Best Practices in Microbial Experimental Evolution: Using Reporters and Long-Read Sequencing to Identify Copy Number Variation in Experimental Evolution Pieter SpealmanTitir DeDavid Gresham Review Open access 03 April 2023 Pages: 356 - 368
Fit-Seq2.0: An Improved Software for High-Throughput Fitness Measurements Using Pooled Competition Assays Fangfei LiJason TarkingtonGavin Sherlock Original Article Open access 06 March 2023 Pages: 334 - 344
Structural Characterization of the Chlorophyllide a Oxygenase (CAO) Enzyme Through an In Silico Approach Debayan DeyRyouichi TanakaHisashi Ito Original Article 03 March 2023 Pages: 225 - 235
Understanding the Origin and Evolution of Tea (Camellia sinensis [L.]): Genomic Advances in Tea Zai-Bao ZhangTao XiongTian Luo Review 01 March 2023 Pages: 156 - 168
Identifying Targets of Selection in Laboratory Evolution Experiments Artemiza A. MartínezGregory I. Lang Review 21 February 2023 Pages: 345 - 355
Non-random Codon Usage of Synonymous and Non-synonymous Mutations in the Human HLA-A Gene Tatsuo MatsushitaTamiko Kano-Sueoka Original Article 21 February 2023 Pages: 169 - 191
Evidence Supporting That C-to-U RNA Editing Is the Major Force That Drives SARS-CoV-2 Evolution Jinxiang WangLiqun WuMeiling Cao Original Article 17 February 2023 Pages: 214 - 224
Revisiting the Design of the Long-Term Evolution Experiment with Escherichia coli Richard E. Lenski Review 15 February 2023 Pages: 241 - 253
Loss of Heterozygosity and Its Importance in Evolution Caiti Smukowski Heil Review Open access 08 February 2023 Pages: 369 - 377
Case Studies in the Assessment of Microbial Fitness: Seemingly Subtle Changes Can Have Major Effects on Phenotypic Outcomes Sarah B. WorthanRobert D. P. McCarthyMegan G. Behringer Original Article Open access 08 February 2023 Pages: 311 - 324
Embracing Complexity: Yeast Evolution Experiments Featuring Standing Genetic Variation Molly K. Burke Review Open access 08 February 2023 Pages: 281 - 292
The Mystery of Cancer Resistance: A Revelation Within Nature Devangkumar D. TrivediSarat Kumar DalaiSonal Rajiv Bakshi Review 24 January 2023 Pages: 133 - 155
Is the Association of the Rare rs35667974 IFIH1 Gene Polymorphism With Autoimmune Diseases a Case of RNA Epigenetics? Athena AndreouAthanasios PapakyriakouElias E. Eliopoulos Original Article Open access 18 January 2023 Pages: 204 - 213
Evolution of TOP1 and TOP1MT Topoisomerases in Chordata Filipa MoreiraMiguel ArenasFilipe Pereira Original Article Open access 18 January 2023 Pages: 192 - 203
Best Practices in Designing, Sequencing, and Identifying Random DNA Barcodes Milo S. JohnsonSandeep VenkataramSergey Kryazhimskiy Review Open access 18 January 2023 Pages: 263 - 280
2022 Zuckerkandl Prize David A. LiberlesDavid Alvarez-PonceJoana C. Silva Announcement 06 January 2023 Pages: 1 - 1
Biochemical Property Based Positional Matrix: A New Approach Towards Genome Sequence Comparison Sudeshna DeySubhram DasD. K. Bhattacharya Original Article 31 December 2022 Pages: 93 - 131
The Fate of Duplicated Enzymes in Prokaryotes: The Case of Isomerases Alejandro Álvarez-LugoArturo Becerra Original Article 29 December 2022 Pages: 76 - 92
Organophosphorus Compound Formation Through the Oxidation of Reduced Oxidation State Phosphorus Compounds on the Hadean Earth Maheen GullTian FengMatthew A. Pasek Original Article 28 December 2022 Pages: 60 - 75
The Memory Problem for Neutral Mutational Models of Evolution David A. Liberles Commentary 23 December 2022 Pages: 2 - 5
Very Low Rates of Spontaneous Gene Deletions and Gene Duplications in Dictyostelium discoideum Shelbi E. GillFrédéric J. J. Chain Original Article Open access 09 December 2022 Pages: 24 - 32
Long-Term Adaptation to Galactose as a Sole Carbon Source Selects for Mutations Outside the Canonical GAL Pathway Artemiza A. MartínezAndrew ConboyGregory I. Lang Original Article 08 December 2022 Pages: 46 - 59
Consequences of Genetic Recombination on Protein Folding Stability Roberto Del AmparoLuis Daniel González-VázquezMiguel Arenas Original Article Open access 03 December 2022 Pages: 33 - 45
Ancestral Sequence Reconstruction of the Ribosomal Protein uS8 and Reduction of Amino Acid Usage to a Smaller Alphabet Fangzheng ZhaoSatoshi Akanuma Original Article 18 November 2022 Pages: 10 - 23
How Many Factors Influence Genomic GC Content Among Prokaryotes? Héctor Musto Letter to the Editor 12 November 2022 Pages: 6 - 9
Bayesian Cross-Validation Comparison of Amino Acid Replacement Models: Contrasting Profile Mixtures, Pairwise Exchangeabilities, and Gamma-Distributed Rates-Across-Sites Thomas BujakiNicolas Rodrigue Original Article Open access 07 October 2022 Pages: 468 - 475
Domain Evolution of Vertebrate Blood Coagulation Cascade Proteins Abdulbaki CobanErich Bornberg-BauerCarsten Kemena Original Article Open access 01 October 2022 Pages: 418 - 428
Epistasis-Driven Evolution of the SARS-CoV-2 Secondary Structure Mahsa AlemrajabiKsenia Macias CalixRaquel Assis Original Article Open access 30 September 2022 Pages: 429 - 437
Early Divergence of the C-Terminal Variable Region of Troponin T Via a Pair of Mutually Exclusive Alternatively Spliced Exons Followed by a Selective Fixation in Vertebrate Heart Tianxin CaoShirin AkhterJ.-P. Jin Original Article 28 September 2022 Pages: 452 - 467
Translation Comes First: Ancient and Convergent Selection of Codon Usage Bias Across Prokaryotic Genomes Francisco González-SerranoCei Abreu-GoodgerLuis Delaye Original Article 26 September 2022 Pages: 438 - 451
Origin of Sex-Biased Mental Disorders: Do Males and Females Experience Different Selective Regimes? C. Michelle BrownQueenie WongRama S. Singh Commentary Open access 12 September 2022 Pages: 401 - 417
The Sponge Interaction Between Circular RNA and microRNA Serves as a Fast-Evolving Mechanism That Suppresses Non-small Cell Lung Cancer (NSCLC) in Humans Liqun WuMeiling CaoJinxiang Wang Original Article 29 August 2022 Pages: 362 - 374
Modified Metabolism and Response to UV Radiation: Gene Expression Variations Along an Elevational Gradient in the Asiatic Toad (Bufo gargarizans) Ying ChenSong TanJinzhong Fu Original Article 27 August 2022 Pages: 389 - 399
uORF-Mediated Translational Regulation of ATF4 Serves as an Evolutionarily Conserved Mechanism Contributing to Non-Small-Cell Lung Cancer (NSCLC) and Stress Response Wenjing XiaoYang SunLina Dong Original Article 13 August 2022 Pages: 375 - 388
Nucleobases in Meteorites to Nucleobases in RNA and DNA? Ramanarayanan KrishnamurthyAaron D. GoldmanYitzhak Tor Letter to the Editor 12 August 2022 Pages: 328 - 331
dN/dS-H, a New Test to Distinguish Different Selection Modes in Protein Evolution and Cancer Evolution Xun Gu Original Article 03 August 2022 Pages: 342 - 351
A Simple Evolutionary Model of Genetic Robustness After Gene Duplication Xun Gu Original Article 01 August 2022 Pages: 352 - 361
In Memoriam of Giorgio Bernardi and Noboru Sueoka: A Personal View Héctor Musto Letter to the Editor 15 July 2022 Pages: 325 - 327
Transposable Element Diversity Remains High in Gigantic Genomes Ava Louise HaleyRachel Lockridge Mueller Original Article 25 June 2022 Pages: 332 - 341
Noether’s Theorem as a Metaphor for Chargaff’s 2nd Parity Rule in Genomics Yannis AlmirantisAstero ProvataWentian Li Commentary 15 June 2022 Pages: 231 - 238
A Closer Look at Non-random Patterns Within Chemistry Space for a Smaller, Earlier Amino Acid Alphabet Christopher Mayer-BaconMarkus MeringerStephen Freeland Original Article 06 June 2022 Pages: 307 - 323
Expansion and Diversification of the 14-3-3 Gene Family in Camellia sinensis Zai-Bao ZhangXue-Ke WangZhi-Guo Feng Original Article 04 June 2022 Pages: 296 - 306
Jump-Chain Simulation of Markov Substitution Processes Over Phylogenies Simon Laurin-LemayKassandra DicksonNicolas Rodrigue Mini-Review Open access 02 June 2022 Pages: 239 - 243
Structural Analysis of Monomeric RNA-Dependent Polymerases Revisited Rodrigo JácomeJosé Alberto Campillo-BalderasAntonio Lazcano Original Article 31 May 2022 Pages: 283 - 295
Analysis of the MCTP Amino Acid Sequence Reveals the Conservation of Putative Calcium- and Lipid-Binding Pockets Within the C2 Domains In Silico José Luis Téllez-ArreolaAtaúlfo Martínez-TorresArgel Estrada-Mondragón Original Article 23 May 2022 Pages: 271 - 282
Functional Diversity of the Lepidopteran ATP-Binding Cassette Transporters Pranoti R. BarveMeenakshi B. TellisHemlata M. Kotkar Review 05 May 2022 Pages: 258 - 270
The Origins and Functions of De Novo Genes: Against All Odds? Caroline M. Weisman Review Open access 22 April 2022 Pages: 244 - 257