Abstract
Aims
This study aimed to investigate how dark septate endophytes (DSE) from arid habitats affect host growth and their application to crops and medicinal plants in drought-prone soils.
Methods
First, the osmotic-stress tolerance of Paraphoma sp., Embellisia chlamydospora, and Cladosporium oxysporum, isolated from Hedysarum scoparium, was tested using osmotically adjusted pure culture. Second, we examined the performance of host (H. scoparium) and non-host (Glycyrrhiza uralensis and Zea mays) plants inoculated with these fungi under mild (MD) and extreme drought (ED) conditions in a growth chamber.
Results
All the DSE showed high tolerance to osmotic stress in vitro and could colonise the roots of all the plants. For H. scoparium, DSE improved the root biomass and length depending on DSE species, with Paraphoma sp. and C. oxysporum exhibiting positive effects under all the drought treatments. For G. uralensis and Z. mays, DSE inoculation enhanced the root development of plants under MD condition and was dependent on the plant–fungus species. However, this positive effect was weakened under extreme drought stress.
Conclusions
DSE isolated from H. scoparium enhanced the root growth of the host plant under drought conditions and may also be used to promote the cultivation of agricultural and medicinal plants.
Similar content being viewed by others
Explore related subjects
Discover the latest articles, news and stories from top researchers in related subjects.Avoid common mistakes on your manuscript.
Introduction
Water deficiency is becoming one of the most important factors affecting human societies and environment (Sheffield et al. 2009). Plants respond to the environmental change directly as well as indirectly; indirect response through altered interactions among species has recently received increased attention. The introduction of symbiotic fungi may influence the response of plants to drought stress and is generally considered to enhance the ability of plants to cope with environmental stresses (Azcón-Aguilar et al. 2003; Kannadan and Rudgers 2008; Kivlin et al. 2013; Shi et al. 2015). It is, therefore, of prime importance to choose fungal strains that are best for individual plant species and are well adapted to drought stressful conditions.
Dark septate endophytes (DSE) generally colonise living plant roots without causing apparent negative effects. They are characterised by dark septate hyphae and melanised microsclerotia (Jumpponen and Trappe 1998; Mandyam and Jumpponen 2005). They are found in diverse ecosystems, especially under stressful environments, such as alpine, dry, saline, and polluted habitats. DSE occur in several orders of Ascomycotina, including Helotiales, Xylariales, and Pleosporales (Ashrafi et al. 2018; Knapp et al. 2018). In some cases, several DSE were reported to display stress tolerance in vitro (Ban et al. 2012; Berthelot et al. 2016; Santos et al. 2017). Melanin, a group of complex polymeric compounds composed of indolic and phenolic monomers, has been considered to provide structural rigidity to cell walls and can increase resistance against environmental stresses, such as those caused by oxidising conditions, drought, and heavy metal (Berthelot et al. 2017a; Bloomfield and Alexander 1967; Butler and Day 1998; Zhan et al. 2011). In addition, studies on the response of DSE to heavy metal stress showed that fungal oxidation plays important roles in decreasing the oxidative damage through the biosynthesis of various antioxidant enzymes, such as superoxide dismutase and catalase activity (Ban et al. 2012; Zhang et al. 2008). The pathogenic or beneficial interactions between DSE and host plants have been discussed in several reports (Mandyam and Jumpponen 2005; Mayerhofer et al. 2013; Newsham 2011). The effects of DSE on host plants are variable and dependent on the host-symbiont combination of the plant and fungal species. Indeed, several DSE act as plant growth promoters by facilitating C, N, and P uptake (Della Monica et al. 2015; Newsham 2011; Surono 2017), and by protecting plants against biotic (pathogen) and abiotic stress (heavy metal, elevated CO2, drought) (Alberton et al. 2010; Andrade-Linares et al. 2011; Likar and Regvar 2013; Santos et al. 2017; Su et al. 2013).
Previous studies on the effects of DSE inoculation on host stress resistance mostly considered heavy metal pollution (Berthelot et al. 2016, 2017b; Diene et al. 2014; Jin et al. 2018; Li et al. 2011; Likar and Regvar 2013; Wang et al. 2016) and pathogen stress (Andrade–Linares et al. 2011; Khastini et al. 2012; Su et al. 2013); the ecological roles of DSE in water deficient habitats are not well known. For example, five DSE isolates obtained from Agropyron cristatum, Psathyrostachys juncea, and Bouteloua gracilis were inoculated in these grasses under low water conditions resulting in positive effects on the shoot dry mass of A. cristatum and P. juncea, but had negative effect in B. gracilis (Perez-Naranjo 2009). In another inoculation study using rice grown in phytotron, Santos et al. (2017) evaluated the ability of DSE to reduce the effects of polyethylene glycol (PEG 6000)-induced water stress. They found that DSE isolates could promote the growth of roots and shoots of plants and the effects varied with the conditions of water deficit. In some cases, DSE can also affect the growth of non-host plants under stress treatments. For example, DSE may promote the growth of plants (Surono 2017; Vergara et al. 2017) and alleviate heavy metal and pathogen stress (Berthelot et al. 2016, 2017b; Diene et al. 2014; Khastini et al. 2012; Li et al. 2011; Wang et al. 2016). Although Exophiala pisciphila isolated from maize was reported to enhance the dry weight of shoots and roots in water-stressed Sorghum bicolor (Zhang et al. 2017), studies evaluating the efficacy of DSE on non-host plants under drought stress are rare.
Hedysarum scoparium is a xerophytic desert shrub found in the arid areas of northwest China, characterised by typical (semi) arid continental climate (Gong et al. 2015). It has been widely used for the recovery of vegetation in northwest China because of the vital roles it plays in the reduction of desertification (Deng et al. 2015). In a previous study, we found that in the natural habitats, the roots of H. scoparium were colonised by typical DSE structures and isolated several DSE strains (Xie et al. 2017). Based on the results of previous studies and considering the harsh growing environment in which H. scoparium occurs, the prospect that DSE could improve the growth of this plant and play important roles in ecosystems with low water availability needs to be explored. In addition, considering the fact that drought stress is increasingly affecting the growth of food crops and medicinal plants (Chaves et al. 2003), it is intriguing to know whether DSE isolated from H. scoparium could colonise these plants and promote their growth in drought-prone soils.
The distribution and abundance of DSE in arid/semiarid ecosystems have been widely investigated, but knowledge about their function in relation to plants is still limited (Knapp et al. 2012, 2015, 2018; Li et al. 2015; Lugo et al. 2009, 2018; Xie et al. 2017). This study aimed to obtain insights into the ecological roles of DSE in arid environments and to extend their potential for agricultural and medicinal plants. Firstly, three DSE strains isolated from H. scoparium were exposed to low osmotic potentials induced by PEG 6000 in pure cultures to test their tolerance to osmotic stress. Secondly, we examined the effects of DSE inoculation on the performance of the host (H. scoparium) and non-host (Glycyrrhiza uralensis, Zea mays) plants in an inoculation experiment using these DSE strains under mild and extreme drought conditions. Specifically, we addressed the following questions in this study: (1) Do the DSE strains from arid habitat exhibit high tolerance to osmotic stress in vitro? (2) Does the DSE inoculation promote the growth of host and non-host plants under drought conditions? If yes, (3) does extreme drought affects the relationship between DSE and plants?
Materials and methods
Fungal isolates and plant materials
The three isolates (DKHB7, WHHB1, and ALSHB3) used in the experiment were obtained from H. scoparium and were deposited in the culture collection of the Laboratory of Plant Ecology, Hebei University, China. These fungi were identified based on phylogenetic analyses of nrDNA Internal Transcribed Spacer (ITS) sequences. Maximum parsimony analysis clustered DKHB7 (Pa, KU561868) with Paraphoma sp. (98% identity with Paraphoma sp. KT269033). WHHB1 (Ec, KU561863) was grouped in a clade with Embellisia chlamydospora AY956759, with a bootstrap support of 100%. ALSHB3 (Co, KU561865) was very closely related to Cladosporium oxysporum (100% identity with Cladosporium oxysporum HM148118) (for details, see Xie et al. 2017). Each isolate was grown on potato dextrose agar (PDA) culture medium for two weeks at 27 °C in the dark.
Mature seeds of H. scoparium were collected from natural populations in Inner Mongolia and stored at 4 °C. Glycyrrhiza uralensis is a perennial leguminous species and an important medicinal plant widely grown in northern China (Xie et al. 2018). The seeds of G. uralensis and Z. mays were provided by Hebei Agriculture University and were stored at 4 °C.
Experiment 1
Osmotic stress tolerance of DSE in vitro
The capacity of the DSE isolates to grow under low osmotic potentials was tested in a preliminary experiment in liquid culture. The experiment was performed under sterile conditions, and the low osmotic potential was induced with PEG 6000. PEG 6000 is an inert osmoticum, widely used to simulate the effect of osmotic stress in organisms, primarily because it is chemically inert and non-toxic (Fernandez and Koide 2013; Santos et al. 2017). The basal medium was a modification of Modified Melin Norkrans (MMN) medium (pH 5.5). PEG 6000 was added to give osmotic potentials of 0, −0.45, −0.90, −1.34, −2.24, and − 3.58 MPa (Chen et al. 2003). Discs of inoculum (5 mm) were cut from the edge of actively growing 14-days-old colonies and one disc, for each isolate, was inoculated into a 250 mL Erlenmeyer flask containing 100 mL liquid medium. The cultures were incubated in the dark for 10 days with constant shaking, and each treatment was replicated four times. Upon harvest, the fungal mycelia were washed with distilled water and collected for the analyses. The fresh mycelia were randomly divided into two parts. The first part was directly used for the determination of superoxide dismutase (SOD) activity and melanin content. The remaining part was weighed before drying to a constant weight at 80 °C and then the water content was determined. The biomass production of DSE was the sum of the dry weights of these two parts.
Determination of the SOD activity and melanin content
Fresh mycelia from each isolate were homogenized and grinded in 5 mL 50 mM potassium phosphate buffer (pH 7.8), which contained 0.2 mM EDTA and 2% (w/v) polyvinylpyrrolidone kept in ice bath. The homogenate was centrifuged at 15,000×g and 4 °C for 30 min. The supernatant liquid was decanted and used for analysis of enzyme activity. The SOD activity was determined using the photochemical method described by Elavarthi and Martin (2010), wherein the activity was determined by recording the decrease in the absorbance of nitroblue tetrazolium (NBT) complex by the enzyme. One unit of SOD was referred to as the quantity of enzyme needed to cause 50% inhibition of the reduction rate of NBT at a wavelength of 560 nm.
Melanin was extracted from mycelia following the method described by Ellis and Griffiths (1974), with minor modifications. Briefly, melanin was extracted from hyphae with hot alkali solution (1 M NaOH at 100 °C) for 4 h in a water bath. The cooled cell extract was filtered through a double layer of filter paper and acidified with concentrated HCl (7 M) until precipitation at pH 2.0. The resulting dark brown precipitate was recovered by centrifugation at 10,000×g for 15 min and washed with distilled water. The coagulated melanin was then dissolved in 1 M NaOH and the yield of melanin was estimated. The amount of melanin was determined by a standard curve plotted from results of photometry at 459 nm.
Experiment 2
Plant growth promotion experiment
The experiment was performed in a growth chamber (27 °C day/ 22 °C night) using a completely randomised design in a 4 × 2 factorial arrangement with DSE inoculation treatment (non-inoculated control, Pa, Ec, Co) and drought treatment (mild drought, MD; extreme drought, ED) as the variables for each plant species (H. scoparium, G. uralensis, and Z. mays). Each treatment was replicated five times, thus, accounting for a total of 120 experimental pots.
The seeds of each plant species were surface sterilised with 70% ethanol for 3 min and 2.5% sodium hypochlorite for 10 min under agitation. The sterilised seeds were thoroughly rinsed with sterile water and then aseptically planted onto water agar medium (containing 10 g/L agar) in Petri dishes for germination at 27 °C. Following pre-germination, the seedlings were transferred to sterile pots (8 cm diameter, 24 cm height; 1 seedling for each pot) containing 500 g sand, which was collected from the natural habitats of H. scoparium and autoclaved for 120 min at 121 °C. The sand contained 10.89 mg/g organic matter, 46.75 mg/kg available nitrogen, and 6.32 mg/kg available phosphorus. The fungal mycelia discs (5 mm in diameter, 1 disc for each plant), cut from a 14-days-old PDA culture medium, were placed 1 cm below the roots of the plants (Ban et al. 2017). The control treatments were inoculated with plugs excised from the medium without fungus. All the inoculation processes were performed on a clean bench. All the pots were kept in a growth chamber at 27 °C during the day and 22 °C during the night under a photoperiod of 10 h, and the mean relative humidity of the air was 60%.
One week after sowing, half of the seedlings (both control and inoculation treatments) were subjected to mild drought stress (MD, 40% field water capacity), and the other half were subjected to extreme drought stress (ED, 20% field water capacity). The drought stress treatments in this study were applied according to the lower and upper limits in the natural habitat of H. scoparium in Northwest China (Xie 2017). The soil moisture was determined with a soil humidity recorder (L99-TWS-2, China). The dry weights of shoots and roots, as well as root colonization and morphological traits were measured at 90 days after sowing. The Z. mays seedlings were harvested at 40 days after sowing.
Plant biomass and root morphology traits
Plant shoots and roots were separately harvested and washed carefully with deionised water. Individual root sections were first floated in approximately 1 cm depth of deionised water in a plexiglass tray and scanned with a desktop scanner (EPSON Perfection V800 Photo, Japan). Several morphological traits of roots (such as, total root length and average root diameter) were determined using the WinRHIZO image analysis system (Chen et al. 2012). The roots were collected after scanning and few root samples were randomly selected to analyse the DSE colonization (see below). The remaining roots and fresh shoots were dried at 70 °C for at least 48 h prior to calculate the plant biomass.
Microscopic observation of root colonization
To evaluate whether the roots were colonised by DSE, the fungal structures within the roots were stained with 0.5% (w/v) acid fuchsin at 90 °C for 20 min and observed under an optical microscope, as described previously (Biemann and Linderman 1981; Phillips and Hayman 1970). For each plant, approximately 20 randomly selected 0.5-cm segments were placed on slides and viewed under a light microscope.
Statistical analyses
All statistical analyses were performed with SPSS 21.0 (SPSS, Chicago). For the first experiment, two-way analysis of variance (ANOVA) was performed to analyse the effects of the DSE species and osmotic stress on the biomass, SOD activity, and melanin content of three DSE. For the second experiment, two-way ANOVA was performed to examine the effects of the DSE inoculation treatment, drought treatment, and their interactions on the dry weight and root morphology traits of each plant species. All data in each experiment were tested for normality and homogeneity of variance before statistical analyses. These statistical analyses were conducted on transformed data (standardised data) of these parameters, but untransformed values are shown. The values reported in figures are means of at least three replicates. Within significant interactions, means were compared by one-way ANOVA in each DSE fungus or plant species. The differences between the means among the different treatments were analysed by Tukey’s honestly significant difference test at a probability level of 0.05.
Results
Experiment 1
Osmotic stress tolerance of DSE in vitro
The antioxidant substances and biomass production of three DSE were observed after 10 days of culture. In general, all the tested DSE isolates exhibited high tolerance to osmotic stress (Table 1, Fig. 1).
In the enhanced stress treatment, all the DSE showed an increasing trend in biomass production, which declined after reaching a maximum value at an osmotic potential of −0.90 (Pa) or − 1.34 MPa (Ec, Co) (Fig. 1a). The highest biomass of Pa, Ec, and Co was 200%, 167%, and 194% of those at 0 MPa, respectively. For Pa and Co, the osmotic stress did not exhibit negative effects on the fungal biomass at all the levels of treatments, and they were able to tolerate and grow well even at −3.58 MPa (Fig. 1a). Ec was more sensitive to the stress treatment than Pa and Co, showing a significantly lower yield at −3.58 MPa than at 0 MPa.
Under low stress treatment (−0.45 MPa), a significant increase in the SOD activity was observed in Pa (+171%), Ec (+84%), and Co (+40%), compared to that under 0 Mpa treatment (Fig. 1b). However, the SOD activity of these fungi decreased when the osmotic potential was lower than −0.9 MPa. At −2.24 MPa, only Ec showed lower SOD activity than at 0 MPa (Fig. 1b). At −3.58 MPa, all the DSE displayed lower values of SOD activity than their unstressed control.
Under conditions of osmotic stress, the melanin content of all the DSE showed an increasing trend initially, after which a decline was observed with decreasing osmotic potential of the medium (Fig. 1c). At −0.45 MPa, the osmotic stress caused a significant increase in the melanin content in Co (+141%) compared to that at 0 MPa; however, no increase in the content was observed in the case of Pa and Ec. When the osmotic potential reached −0.90 or − 1.34 MPa, the melanin content of all the DSE was significantly higher than that at 0 MPa. The melanin content of DSE showed a decrease at −2.24 and − 3.58 MPa. At the lowest osmotic potential (−3.58 MPa), the melanin content of Pa and Ec was lower than that at 0 MPa.
Experiment 2
Plant growth promotion experiment
After harvesting, no DSE structures were observed in the roots of control plants. The presence of DSE hyphae and microsclerotia was observed in the stained root segments of H. scoparium, G. uralensis, and Z. mays (Supplementary Fig. S1). Among all treatments, the factor ‘plant species (Plant)’ had the highest effect on the total biomass of plants (Supplementary Fig. S2). The biomass of the respective controls of these three plants differed significantly (for example, by ~0.2–4.0 g) under the conditions used in this study. For determining the influence of DSE on the growth of host plants and for assessing their applicability for crops and medicinal plants, the data were analysed and shown separately for each plant species.
Plant root morphology and development
The root morphology of H. scoparium was significantly affected by the DSE species as well as by the drought treatment (Table 2). Inoculation with Pa and Co increased the total root length of the host plant by 388% and 300% as compared to that of the control plants regardless of the drought treatment; however, for Ec, the positive effect of DSE inoculation on the root length was not observed (Fig. 2a). All the inoculated plants exhibited significantly lower values of root diameter than the control plants (Fig. 2b).
There were significant interactions between the DSE species and drought treatment for the total root length of G. uralensis (Table 2). Under MD conditions, inoculation with Pa and Co increased the total root length of G. uralensis by 153% and 101% as compared to that of the control plants (Fig. 2c). Under ED conditions, extreme drought stress decreased the positive effects of Pa inoculation on the root length, whereas the values were increased by 180% when inoculated with Co as compared to those of the control plants. For plants inoculated with Ec, the total root length showed no difference with respect to the control plants under both the MD and ED treatments. For all the three DSE, inoculation also resulted in significantly lower root diameter than that observed for the control plants (Fig. 2d).
The root morphology of Z. mays was significantly affected by the DSE species, drought treatment, and their interactions (Table 2). Under MD conditions, plants inoculation with Co had a positive effect on the total root length of Z. mays (+22%) relative to that of the control plants (Fig. 2e). Under ED conditions, extreme drought stress decreased the positive effect of DSE inoculation. For the inoculated and non-inoculated plants, the total root length of plants did not show any difference. Unlike H. scoparium and G. uralensis plants, DSE inoculation did not affect the root diameter of Z. mays seedlings (Fig. 2f).
Plant biomass production
The biomass production of H. scoparium was significantly affected by the DSE species regardless of the drought treatment (Table 2). The inoculation of Pa and Co resulted in significant increases in root (+200% and + 112%) and root/shoot ratio (+147% and + 91%) of hosts compared to the corresponding values for the control plants (Fig. 3a,b). There were no significant differences in the biomass production between the Ec and control plants.
The DSE species significantly influenced the shoot biomass of G. uralensis regardless of drought treatment (Table 2). Compared to the control plants, inoculation with Pa improved the shoot biomass of the host plants by 15%, whereas Ec and Co had no effect (Fig. 3c). The root biomass and root/shoot ratio were significantly affected by the DSE species, drought treatment, and their interactions (Table 2). Under MD conditions, inoculation with Pa and Co increased the root biomass of hosts by 42% and 29% as compared to those of the control plants, whereas inoculation with Ec had a neutral effect (Fig. 3c). Under ED conditions, only the plants inoculated with Co displayed higher root biomass than that of control plants. The root/shoot ratio of G. uralensis plants was increased by Pa under MD conditions, as well as by Co under ED conditions compared to that in the control treatment (Fig. 3d).
The effects of DSE species, drought treatment, and their interactions on the biomass of Z. mays plants were significant (Table 2). Under MD conditions, the shoot biomass of Z. mays was decreased by the Pa (−23%) and Ec (−29%) inoculation compared to that of the control plants (Fig. 3e). The plants inoculated with Ec and Co showed an increase in the root biomass (+39% and + 42%), and inoculation with Ec also increased the root/shoot ratio by 101% as compared to that in the control treatment (Fig. 3e,f). No significant difference on the biomass production was observed between the control and inoculated plants under the ED conditions.
Discussion
Osmotic stress tolerance of the DSE isolates
The results obtained using the pure cultures revealed that no significant decline in the biomass production of Pa and Co occurred when exposed to any of the stress treatments, whereas Ec was negatively affected at −3.58 MPa. In addition, our observations showed that the intermediate stress treatment (−1.34 or − 2.24 MPa) was more suitable for the DSE growth. A similar result was obtained by Santos et al. (2017), who found that the growth of DSE isolated from wild rice was increased by 50% at −0.8 MPa than that of at 0 MPa. We speculate that the preference of DSE for low osmotic potentials in this study might be related to their arid habitats and the low water potential of H. scoparium in deserts (Bai et al. 2008; Gong et al. 2015; Xie et al. 2017). Under this condition, these DSE might have adapted well to the arid environments.
Osmotic stress usually exerts negative effects on organisms and causes oxidative damage in cells (Li et al. 2008; Liu et al. 2010). In this study, we determined the SOD activity and melanin content in these three fungi to detect the response of antioxidant substances to osmotic stress. SOD has been reported as one of the most important enzymes for the removal of reactive oxygen species (ROS) (Collin-Hansen et al. 2005). The increased SOD activity in DSE at high osmotic potential (−0.45 MPa) indicated that SOD was synthesised to remove ROS under intensified stress treatment. Similar phenomenon was also reported in the response of DSE exposed to heavy metals, with enhancement in the SOD activity observed under Pb stress (Ban et al. 2012). The SOD activity declined at osmotic potentials below −0.90 MPa, indicating that other components might contribute to the fungal response to enhanced stress treatment. For all the DSE used in the present study, the melanin content was significantly increased with the decrease in osmotic potentials from −0.90 to −2.24 MPa. Melanin is considered to be an important trait for the survival of DSE under stressful environments because it can act as an antioxidant agent to relieve oxidative damage (Ban et al. 2012; Zhan et al. 2011). Besides, melanin production has also been reported to contribute to osmotic stress tolerance of an ectomycorrhizal fungus induced by PEG (Fernandez and Koide 2013). Thus, increased melanin content in DSE under −0.90 to 2.24 MPa treatments, as observed in this study, might contribute to their high tolerance to osmotic stress.
Effects of DSE inoculation on host plants
Although there is accumulating evidence regarding the diversity and distribution of DSE (Barrow 2003; Knapp et al. 2012; Lugo et al. 2015; Porras-Alfaro et al. 2008; Xie et al. 2017; Zhang et al. 2010), their effects on plants are not well understood, especially under drought conditions (Santos et al. 2017). The results of existing studies on the effects of DSE inoculation on plant growth under drought conditions are variable. The inoculation of rice or B. gracilis plants with DSE isolates in soils exposed to drought resulted in neutral to negative effects on plant growth (Perez-Naranjo 2009; Santos et al. 2017). On the other hand, sorghum plant grew better in soils exposed to drought upon inoculation with E. pisciphila (Zhang et al. 2017). In the present study, typical DSE hyphae and microsclerotia were observed in roots of H. scoparium after harvest in all the treatments, which indicated that all these DSE are effective root colonizers even under extreme conditions of drought. Moreover, the host response of H. scoparium to DSE colonization was strain-dependent but was independent of drought treatment. Specifically, H. scoparium plants inoculated with Pa and Co showed significantly higher root biomass production than the control plants, regardless of drought stress conditions, whereas Ec did not have any influence on the growth of the host. Our observations were consistent with those of previous studies showing that the species of DSE may influence the DSE-plant interaction (Mandyam and Jumpponen 2005; Mayerhofer et al. 2013; Newsham 2011).
The positive effects of DSE inoculation on H. scoparium appeared to occur below the ground as indicated by the fact that the most important and consistent plant response to DSE inoculation was the increase in root growth. Even though DSE displayed no influence on the shoot biomass of the host, the inoculation of Pa and Co in H. scoparium improved the root biomass under drought conditions. It has been well documented that larger biomass allocation to roots is a key mechanism for enhancing plant survival in arid environments (Alvarez-Flores et al. 2014; González-Teuber et al. 2018). Thus, our results suggest that colonization by Pa and Co was able to promote the growth of H. scoparium under drought stress, probably through biomass adjustments. This might be an important survival strategy for H. scoparium in natural habitats, where water deficiency is always a common phenomenon (Deng et al. 2015; Gong et al. 2015).
The DSE inoculation also regulated the root architecture of H. scoparium to improve the performance of plants under drought conditions. In this study, plants inoculated with Pa and Co exhibited higher length of roots than the control plants, indicating positive effects on the root growth. The development of a deep and extensive root system can regulate the absorption of water and nutrients in soil, which ultimately influences the biomass production (Hund et al. 2009). Several plant growth-promoting microbes, including DSE, have also been shown to influence the root architecture of plants (Junges et al. 2016; López-Coria et al. 2016; González-Teuber et al. 2018; Villarreal-Ruiz et al. 2004; Wu et al. 2010). For example, the DSE could promote the root development of an endangered Chinese medicinal plant under unstressed conditions (Wu et al. 2010). Moreover, the average root diameter of DSE-inoculated H. scoparium decreased compared to the root diameter of the control plants. The roots with small diameters have been reported to exhibit faster growth and allocation of more nutrients for increasing their length, which is beneficial for plants under drought conditions (Comas et al. 2013; Palta et al. 2011). Therefore, the longer root length and finer root diameter of H. scoparium in the present study may be advantageous to the plants for drought adaptation (Awad et al. 2018).
Effects of DSE inoculation on non-host plants
To gain further insights into the application of DSE on agriculture and medicinal plants, we analysed the growth promotion ability of DSE in G. uralensis and Z. mays. As a plant well-adapted to low-fertility soil and arid environments, G. uralensis is expected to be used for ecological restoration of degraded ecosystems in (semi) arid regions (Xie et al. 2018). Moreover, Z. mays is usually used as a compatible host plant for DSE inoculation experiments (Li et al. 2011; Wang et al. 2016). A few studies have reviewed the use of non-host DSE as potential agents capable of enhancing the growth of crops, such as cabbage, maize, Asparagus officinalis, tomato, and rice (Andrade-Linares et al. 2011; Ban et al. 2017; Diene et al. 2014; Surono 2017; Vergara et al. 2017; Wang et al. 2016). For medicinal plants, the existing reports have generally focused on the growth promoting ability of DSE on host plants (Wu et al. 2010; Zhang et al. 2012; Zhu et al. 2015). In this study, all the DSE used could colonise the roots of G. uralensis and Z. mays and showed a positive effect on the root development of plants. This observation, therefore, agrees with the initial prediction that DSE could act as non-host colonizers and enhance the growth of the non-host plants. Our results further suggested that DSE respond differently depending on stress conditions and the plant-fungus species. Under MD conditions, Pa and Co improved the root growth of G. uralensis; however, for Z. mays plants, Ec and Co were more prominent. Thus, Co exerted the best effects on non-host plants under MD conditions. This promotion effect was similar to that reported by Zhang et al. (2017), showing that DSE inoculation improved the dry weight of roots in sorghum under drought condition. Under ED conditions, only Co showed an obvious enhancement of the root biomass in G. uralensis, indicating that the positive effects of DSE inoculation were decreased by extreme drought stress. As Co exhibited positive effects on root growth in G. uralensis plants under both MD and ED conditions, it was considered to be the best fungus for this plant species.
Conclusion
In this study, three DSE isolated from H. scoparium showed high tolerance to osmotic stress in vitro and were able to colonise the host and non-host plants. Despite originating from the same habitats, the three DSE showed a strong interspecific variation in osmotic-stress tolerance and displayed considerable functional differences on plant growth. The response of plants to DSE varied from neutral to beneficial depending on the plant and fungus species as well as on the drought treatment. For the host plant, two of the three DSE improved the root growth in H. scoparium under both the MD and ED treatments. For the non-host plants, the positive effects of DSE inoculation on G. uralensis and Z. mays were mainly significant under the MD treatment. Overall, DSE from arid habitat enhanced the root growth of host plants under drought conditions and may also be used to promote the cultivation of agricultural and medicinal plants.
References
Alberton O, Kuyper TW, Summerbell RC (2010) Dark septate root endophytic fungi increase growth of scots pine seedlings under elevated CO2 through enhanced nitrogen use efficiency. Plant Soil 328:459–470. https://doi.org/10.1007/s11104-009-0125-8
Alvarez-Flores R, Winkel T, Nguyen-Thi-Truc A, Joffre R (2014) Root foraging capacity depends on root system architecture and ontogeny in seedlings of three Andean Chenopodium species. Plant Soil 380:415–428. https://doi.org/10.1007/s11104-014-2105-x
Andrade-Linares DR, Grosch R, Restrepo S, Krumbein A, Franken P (2011) Effects of dark septate endophytes on tomato plant performance. Mycorrhiza 21:413–422. https://doi.org/10.1007/s00572-010-0351-1
Ashrafi S, Knapp DG, Blaudez D, Chalot M, Maciá-Vicente JG, Zagyva I, Dababat AA, Maier W, Kovács GM (2018) Inhabiting plant roots, nematodes, and truffles- Polyphilus, a new helotialean genus with two globally distributed species. Mycologia 110:286–299. https://doi.org/10.1080/00275514.2018.1448167
Awad W, Byrne PF, Reid SD, Comas LH, Haley SD (2018) Great plains winter wheat varies for root length and diameter under drought stress. Agron J 110:226–235. https://doi.org/10.2134/agronj2017.07.0377
Azcón-Aguilar C, Palenzuela J, Roldán A, Bautista S, Vallejo R, Barea JM (2003) Analysis of the mycorrhizal potential in the rhizosphere of representative plant species from desertification-threatened Mediterranean shrublands. Appl Soil Ecol 22:29–37. https://doi.org/10.1016/S0929-1393(02)00107-5
Bai X, Zhu J, Zhao A, Su P, Bu Q, Zhao X (2008) Comparison of physiological adaptabilities of several desert plants to drying stress. Chin J Appl Environ Biol 14(6):763–768. (In Chinese)
Ban Y, Tang M, Chen H, Xu Z, Zhang H, Yang Y (2012) The response of dark septate endophytes (DSE) to heavy metals in pure culture. PLoS One 7:e47968. https://doi.org/10.1371/journal.pone.0047968
Ban Y, Xu Z, Yang Y, Zhang H, Chen H, Tang M (2017) Effect of dark septate endophytic fungus Gaeumannomyces cylindrosporus on plant growth, photosynthesis and pb tolerance of maize (Zea mays L.). Pedosphere 27:283–292. https://doi.org/10.1016/s1002-0160(17)60316-3
Barrow JR (2003) Atypical morphology of dark septate fungal root endophytes of Bouteloua in arid southwestern USA rangelands. Mycorrhiza 13:239–247. https://doi.org/10.1007/s00572-003-0222-0
Berthelot C, Leyval C, Foulon J, Chalot M, Blaudez D (2016) Plant growth promotion, metabolite production and metal tolerance of dark septate endophytes isolated from metal-polluted poplar phytomanagement sites. FEMS Microbiol Ecol 92:fiw144. https://doi.org/10.1093/femsec/fiw144
Berthelot C, Perrin Y, Leyval C, Blaudez D (2017a) Melanization and ageing are not drawbacks for successful agro-transformation of dark septate endophytes. Fungal Biol 121:652–663. https://doi.org/10.1016/j.funbio.2017.04.004
Berthelot C, Blaudez D, Leyval C (2017b) Differential growth promotion of poplar and birch inoculated with three dark septate endophytes in two trace element-contaminated soils. Int J Phytoremediat 19:1118–1125. https://doi.org/10.1080/15226514.2017.1328392.
Biemann B, Linderman RG (1981) Quantifying vesicular arbuscular mycorrhizae: a proposed method towards standardization. New Phytol 87(1):63–67. https://doi.org/10.1111/j.1469-8137.1981.tb01690.x
Bloomfield BJ, Alexander M (1967) Melanins and resistance of fungi to lysis. J Bacteriol 93:1276–1280
Butler M, Day A (1998) Fungal melanins: a review. Can J Microbiol 44:1115–1136. https://doi.org/10.1139/w98-119
Chaves MM, Maroco JP, Pereira JS (2003) Understanding plant responses to drought-from genes to the whole plant. Funct Plant Biol 30(3):239–264. https://doi.org/10.1071/FP02076
Chen DM, Khalili K, Cairney JWG (2003) Influence of water stress on biomass production by isolates of an ericoid mycorrhizal endophyte of Woollsia pungens and Epacris microphylla (Ericaceae). Mycorrhiza 13:173–176. https://doi.org/10.1007/s00572-003-0228-7
Chen YL, Dunbabin VM, Diggle AJ, Siddique KHM, Rengel Z (2012) Assessing variability in root traits of wild Lupinus angustifolius germplasm: basis for modelling root system structure. Plant Soil 354:141–155. https://doi.org/10.1007/s11104-011-1050-1
Collin-Hansen C, Andersen RA, Steinnes E (2005) Molecular defense systems are expressed in the king bolete (Boletus edulis) growing near metal smelters. Mycologia 97:973–983. https://doi.org/10.1080/15572536.2006.11832747
Comas LH, Becker SR, Cruz VMV, Byrne PF, Dierig DA (2013) Root traits contributing to plant productivity under drought. Front Plant Sci 4:442. https://doi.org/10.3389/fpls.2013.00442
Della Monica IF, Saparrat MCN, Godeas AM, Scervino JM (2015) The co-existence between DSE and AMF symbionts affects plant P pools through P mineralization and solubilization processes. Fungal Ecol 17:10–17. https://doi.org/10.1016/j.funeco.2015.04.004
Deng J, Ding G, Gao G, Wu B, Zhang Y, Qin S, Fan W (2015) The sap flow dynamics and response of Hedysarum scoparium to environmental factors in semiarid northwestern China. PLoS One 10:e0131683. https://doi.org/10.1371/journal.pone.0131683
Diene O, Sakagami N, Narisawa K (2014) The role of dark septate endophytic fungal isolates in the accumulation of cesium by Chinese cabbage and tomato plants under contaminated environments. PLoS One 9:e109233. https://doi.org/10.1371/journal.pone.0109233
Elavarthi S, Martin B (2010) Spectrophotometric assays for antioxidant enzymes in plants. In: Sunkar R. (eds) plant stress tolerance. Methods in molecular biology (methods and protocols), 639. Humana Press
Ellis DH, Griffiths DA (1974) The location and analysis of melanins in the cell walls of some soil fungi. Can J Microbiol 20(10):1379–1386. https://doi.org/10.1139/m74-212
Fernandez CW, Koide RT (2013) The function of melanin in the ectomycorrhizal fungus Cenococcum geophilum under water stress. Fungal Ecol 6:479–486. https://doi.org/10.1016/j.funeco.2013.08.004
Gong C, Wang J, Hu C, Wang J, Ning P, Bai J (2015) Interactive response of photosynthetic characteristics in Haloxylon ammodendron and Hedysarum scoparium exposed to soil water and air vapor pressure deficits. J Environ Sci 34:184–196. https://doi.org/10.1016/j.jes.2015.03.012
González-Teuber M, Urzúa A, Plaza P, Bascuñán-Godoy L (2018) Effects of root endophytic fungi on response of Chenopodium quinoa to drought stress. Plant Ecol 219:231–240. https://doi.org/10.1007/s11258-017-0791-1
Hund A, Ruta N, Liedgens M (2009) Rooting depth and water use efficiency of tropical maize inbred lines, differing in drought tolerance. Plant Soil 318:311–325. https://doi.org/10.1007/s11104-008-9843-6
Jin HQ, Liu HB, Xie YY, Zhang YG, Xu QQ, Mao LJ, Li XJ, Chen J, Lin FC, Zhang CL (2018) Effect of the dark septate endophytic fungus Acrocalymma vagum on heavy metal content in tobacco leaves. Symbiosis 74:89–95. https://doi.org/10.1007/s13199-017-0485-4
Jumpponen A, Trappe JM (1998) Dark septate endophytes: a review of facultative biotrophic root-colonizing fungi. New Phytol 140:295–310. https://doi.org/10.1046/j.1469-8137.1998.00265.x
Junges E, Muniz MFB, Bastos BO, Oruoski P (2016) Biopriming in bean seeds. Acta Agr Scand, B-SP 66:207–214. https://doi.org/10.1080/09064710.2015.1087585
Kannadan S, Rudgers JA (2008) Endophyte symbiosis benefits a rare grass under low water availability. Funct Ecol 22:706–713. https://doi.org/10.1111/j.1365-2435.2008.01395.x
Khastini RO, Ohta H, Narisawa K (2012) The role of a dark septate endophytic fungus, Veronaeopsis simplex Y34, in Fusarium disease suppression in Chinese cabbage. J Microbiol 50:618–624. https://doi.org/10.1007/s12275-012-2105-6
Kivlin SN, Emery SM, Rudgers JA (2013) Fungal symbionts alter plant responses to global change. Am J Bot 100:1445–1457. https://doi.org/10.3732/ajb.1200558
Knapp DG, Pintye A, Kovács GM (2012) The dark side is not fastidious-dark septate endophytic fungi of native and invasive plants of semiarid sandy areas. PLoS One 7:e32570. https://doi.org/10.1371/journal.pone.0032570
Knapp DG, Kovács GM, Zajta E, Groenewald JZ, Crous PW (2015) Dark septate endophytic pleosporalean genera from semiarid areas. Persoonia-Molecular Phylogeny and Evolution of Fungi 35:87–100. https://doi.org/10.3767/003158515X687669
Knapp DG, Németh JB, Barry K, Hainaut M, Henrissat B, Johnson J, Kuo A, Lim JHP, Lipzen A, Nolan M, Ohm RA, Tamás L, Grigoriev IV, Spatafora JW, Nagy LG, Kovács GM (2018) Comparative genomics provides insights into the lifestyle and reveals functional heterogeneity of dark septate endophytic fungi. Sci Rep 8:6321. https://doi.org/10.1038/s41598-018-24686-4
Li WYF, Shao G, Lam HM (2008) Ectopic expression of GmPAP3 alleviates oxidative damage caused by salinity and osmotic stresses. New Phytol 178:80–91. https://doi.org/10.1111/j.1469-8137.2007.02356.x
Li T, Liu MJ, Zhang XT, Zhang HB, Sha T, Zhao ZW (2011) Improved tolerance of maize (Zea mays L.) to heavy metals by colonization of a dark septate endophyte (DSE) Exophiala pisciphila. Sci Total Environ 409:1069–1074. https://doi.org/10.1016/j.scitotenv.2010.12.012
Li BK, He XL, He C, Chen YY, Wang XQ (2015) Spatial dynamics of dark septate endophytes and soil factors in the rhizosphere of Ammopiptanthus mongolicus in Inner Mongolia, China. Symbiosis 65:75–84. https://doi.org/10.1007/s13199-015-0322-6
Likar M, Regvar M (2013) Isolates of dark septate endophytes reduce metal uptake and improve physiology of Salix caprea L. Plant Soil 370:593–604. https://doi.org/10.1007/s11104-013-1656-6
Liu Y, Xu S, Ling T, Xu L, Shen W (2010) Heme oxygenase/carbon monoxide system participates in regulating wheat seed germination under osmotic stress involving the nitric oxide pathway. J Plant Physiol 167:1371–1379. https://doi.org/10.1111/j.1469-8137.2007.02356.x
López-Coria M, Hernández-Mendoza JL, Sánchez-Nieto S (2016) Trichoderma asperellum induces maize seedling growth by activating the plasma membrane H+-ATPase. MPMI 29:797–806. https://doi.org/10.1094/mpmi-07-16-0138-r
Lugo MA, Molina MG, Crespo EM (2009) Arbuscular mycorrhizas and dark septate endophytes in bromeliads from south American arid environment. Symbiosis 47:17–21. https://doi.org/10.1007/s11104-013-1656-6
Lugo MA, Reinhart KO, Menoyo E, Crespo EM, Urcelay C (2015) Plant functional traits and phylogenetic relatedness explain variation in associations with root fungal endophytes in an extreme arid environment. Mycorrhiza 25:85–95. https://doi.org/10.1007/s00572-014-0592-5
Lugo MA, Menoyo E, Allione LR, Negritto MA, Henning JA, Anton AM (2018) Arbuscular mycorrhizas and dark septate endophytes associated with grasses from the argentine Puna. Mycologia 110:654–665. https://doi.org/10.1080/00275514.2018.1492846
Mandyam K, Jumpponen A (2005) Seeking the elusive function of the root-colonising dark septate endophytic fungi. Stud Mycol 53:173–189. https://doi.org/10.3114/sim.53.1.173
Mayerhofer MS, Kernaghan G, Harper KA (2013) The effects of fungal root endophytes on plant growth: a meta-analysis. Mycorrhiza 23:119–128. https://doi.org/10.1007/s00572-012-0456-9
Newsham KK (2011) A meta-analysis of plant responses to dark septate root endophytes. New Phytol 190:783–793. https://doi.org/10.1111/j.1469-8137.2010.03611.x
Palta JA, Chen X, Milroy SP, Rebetzke GJ, Dreccer MF, Watt M (2011) Large root systems: are they useful in adapting wheat to dry environments? Funct Plant Biol 38:347–354. https://doi.org/10.1071/FP11031
Perez-Naranjo JC (2009) Dark septate and arbuscular mycorrhizal fungal endophytes in roots of prairie grasses. Dissertation. In: University of Saskatchewan
Phillips JM, Hayman DS (1970) Improved procedures for clearing roots and staining parasitic and vesicular-arbuscular mycorrhizal fungi for rapid assessment of infection. T Trans Br Mycol Soc 55:158–163. https://doi.org/10.1016/S0007-1536(70)80110-3
Porras-Alfaro A, Herrera J, Sinsabaugh RL, Odenbach KJ, Lowrey T, Natvig DO (2008) Novel root fungal consortium associated with a dominant desert grass. Appl Environ Microbiol 74:2805–2813. https://doi.org/10.1128/aem.02769-07
Santos SGD, Silva PRAD, Garcia AC, Zilli JÉ, Berbara RLL (2017) Dark septate endophyte decreases stress on rice plants. Braz J Microbiol 48:333–341. https://doi.org/10.1016/j.bjm.2016.09.018
Sheffield J, Andreadis KM, Wood EF, Lettenmaier DP (2009) Global and continental drought in the second half of the twentieth century: severity–area–duration analysis and temporal variability of large-scale events. J Clim 22:1962–1981. https://doi.org/10.1175/2008JCLI2722.1
Shi Z, Mickan B, Feng G, Chen Y (2015) Arbuscular mycorrhizal fungi improved plant growth and nutrient acquisition of desert ephemeral Plantago minuta under variable soil water conditions. J Arid Land 7:414–420. https://doi.org/10.1007/s40333-014-0046-0
Su ZZ, Mao LJ, Li N, Feng XX, Yuan ZL, Wang LW, Lin FC, Zhang CL (2013) Evidence for biotrophic lifestyle and biocontrol potential of dark septate endophyte Harpophora oryzae to rice blast disease. PLoS One 8(4):e61332. https://doi.org/10.1371/journal.pone.0061332
Surono NK (2017) The dark septate endophytic fungus Phialocephala fortinii is a potential decomposer of soil organic compounds and a promoter of Asparagus officinalis growth. Fungal Ecol 28:1–10. https://doi.org/10.1016/j.funeco.2017.04.001
Vergara C, Araujo KEC, Urquiaga S, Schultz N, Balieiro FC, Medeiros PS, Santos LA, Xavier GR, Zilli JE (2017) Dark septate endophytic fungi help tomato to acquire nutrients from ground plant material. Front Microbiol 8:2437. https://doi.org/10.3389/fmicb.2017.02437
Villarreal-Ruiz L, Anderson IC, Alexander IJ (2004) Interaction between an isolate from the Hymenoscyphus ericae aggregate and roots of Pinus and Vaccinium. New Phytol 164:183–192. https://doi.org/10.1111/j.1469-8137.2004.01167.x
Wang JL, Li T, Liu GY, Smith JM, Zhao ZW (2016) Unraveling the role of dark septate endophyte (DSE) colonizing maize (Zea mays) under cadmium stress: physiological, cytological and genic aspects. Sci Rep 6:22028. https://doi.org/10.1038/srep22028
Wu LQ, Lv YL, Meng ZX, Chen J, Guo SX (2010) The promoting role of an isolate of dark-septate fungus on its host plant Saussurea involucrata Kar. Et Kir. Mycorrhiza 20:127–135. https://doi.org/10.1007/s00572-009-0268-8
Xie L (2017) Species diversity and salt tolerance of DSE in the roots of Hedysarum scoparium Fisch. Et Mey. In Northwest China. Dissertation. Hebei University
Xie L, He X, Wang K, Hou L, Sun Q (2017) Spatial dynamics of dark septate endophytes in the roots and rhizospheres of Hedysarum scoparium in Northwest China and the influence of edaphic variables. Fungal Ecol 26:135–143. https://doi.org/10.1016/j.funeco.2017.01.007
Xie W, Hao Z, Zhou X, Jiang X, Xu L, Wu S, Zhao A, Zhang X, Chen B (2018) Arbuscular mycorrhiza facilitates the accumulation of glycyrrhizin and liquiritin in Glycyrrhiza uralensis under drought stress. Mycorrhiza 28:285–300. https://doi.org/10.1007/s00572-018-0827-y
Zhan F, He Y, Zu Y, Li T, Zhao Z (2011) Characterization of melanin isolated from a dark septate endophyte (DSE), Exophiala pisciphila. World J Microbiol Biotechnol 27:2483–2489. https://doi.org/10.1007/s11274-011-0712-8
Zhang Y, Zhang Y, Liu M, Shi X, Zhao Z (2008) Dark septate endophyte (DSE) fungi isolated from metal polluted soils: their taxonomic position, tolerance, and accumulation of heavy metals In Vitro. J Microbiol 46:624–632. https://doi.org/10.1007/s12275-008-0163-6
Zhang H, Tang M, Chen H, Wang Y, Ban Y (2010) Arbuscular mycorrhizas and dark septate endophytes colonization status in medicinal plant Lycium barbarum L. in arid northwestern China. Afr J Microbiol Res 4:1914–1920
Zhang H, Tang M, Chen H, Wang Y (2012) Effects of a dark-septate endophytic isolate LBF-2 on the medicinal plant Lycium barbarum L. J Microbiol 50:91–96. https://doi.org/10.1007/s12275-012-1159-9
Zhang QM, Gong MG, Yuan JF, Hou Y, Zhang HM, Wang Y, Hou X (2017) Dark septate endophyte improves drought tolerance in Sorghum. Int J Agric Biol 19:53–60. https://doi.org/10.17957/ijab/15.0241
Zhu ZB, Fan JY, Guo QS, Liu ZY, Zhu GS (2015) The growth and medicinal quality of Epimedium wushanense are improved by an isolate of dark septate fungus. Pharm Biol 53:1344–1351. https://doi.org/10.3109/13880209.2014.982296
Acknowledgements
This study was financially supported by the National Natural Science Foundation of China (project no. 31470533, 31770561, 31800345). We greatly appreciate the support of Experimental Center of Desert Forestry, CAF for their invaluable assistance on this experiment.
Author information
Authors and Affiliations
Corresponding author
Additional information
Responsible Editor: Felipe E. Albornoz.
Publisher’s note
Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.
Electronic supplementary material
ESM 1
(DOCX 1183 kb)
Rights and permissions
About this article
Cite this article
Li, X., He, C., He, X. et al. Dark septate endophytes improve the growth of host and non-host plants under drought stress through altered root development. Plant Soil 439, 259–272 (2019). https://doi.org/10.1007/s11104-019-04057-2
Received:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s11104-019-04057-2