Abstract
L-asparaginase is a tetrameric enzyme from the amidohydrolases family, that catalyzes the breakdown of L-asparagine into L-aspartic acid and ammonia. Since its discovery as an anticancer drug, it is used as one of the prime chemotherapeutic agents to treat acute lymphoblastic leukemia. Apart from its use in the biopharmaceutical industry, it is also used to reduce the formation of a carcinogenic substance called acrylamide in fried, baked, and roasted foods. L-asparaginase is derived from many organisms including plants, bacteria, fungi, and actinomycetes. Currently, L-asparaginase preparations from Escherichia coli and Erwinia chrysanthemi are used in the clinical treatment of acute lymphoblastic leukemia. However, they are associated with low yield and immunogenicity problems. At this juncture, endophytic fungi from medicinal plants have gained much attention as they have several advantages over the available bacterial preparations. Many medicinal plants have been screened for L-asparaginase producing endophytic fungi and several studies have reported potent L-asparaginase producing strains. This review provides insights into fungal endophytes from medicinal plants and their significance as probable alternatives for bacterial L-asparaginase.
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Introduction
Cancer is one of the most dreaded health diseases worldwide. Globally, about 1 in 6 deaths is due to cancer [1]. Among various types of cancer, lung cancer is the most commonly identified, with 11.6% of the total cases reported and acute lymphoblastic leukemia (ALL) is the most common childhood cancer, which accounts for 28% of total cases reported [2]. One of the chemotherapeutic drugs used for the treatment of ALL is L-asparaginase, an amidohydrolase class of enzymes that catalyzes the hydrolysis of L-asparagine into L-aspartic acid and ammonia [3]. It has gained vital prominence in the field of scientific research because of its antineoplastic property. L-asparaginase is also used for the treatment of acute myeloblastic leukemia, Hodgkin’s disease, chronic lymphocytic leukemia, pancreatic carcinoma, non-Hodgkin’s lymphoma, and bovine lymphosarcoma [4]. Besides, L-asparaginase is also employed in food industries as it reduces the formation of carcinogenic acrylamide in fried, baked, and roasted foods [5].
Two main types of L-asparaginase have been identified based on the homology in the sequence, function, and structure, namely, type I and type II. Type I L-asparaginases are cytoplasmic and possess similar enzymatic activity towards both L-glutamine and L-asparagine. Type II L-asparaginases are periplasmic and display higher specific activity towards L-asparagine than L-glutamine [6]. Type II L-asparaginase has shown potential antitumor activity and is used in the treatment of ALL.
Industrial production of L-asparaginase is often carried out using Escherichia coli and Erwinia chrysanthemi (Previously known as Dickeya dadanti) [7]. However, L-asparaginase from prokaryotic sources possesses many complications including hypersensitivity. Besides this, contamination with glutaminase, and short half-life are the major problems that make bacterial L-asparaginase an inefficient anticancer agent [8]. Whereas, L-asparaginase from fungi has lesser side effects as they are eukaryotes and thus, it has been studied in many fungal species [9]. Production of L-asparaginase is reported from several fungi such as Aspergillus niger, A. terreus, Penicillium cyclopium, Rhizomucor miehei, Flammulina velutipes and Ganoderma australe [10, 11].
Among these, endophytic fungi have gained much attention because of their ubiquity and diversity. Endophytic fungi are a group of diverse fungi that reside inside the internal tissues of living plants without causing any noticeable infections to the host. The rationale behind studying endophytic fungi is, as a result of their mutualistic association they can produce compounds found in the host plant. The discovery of taxol, an anticancer compound from the endophytic fungi Taxomyces andreanae inhabiting Taxus brevifolia promoted the research on endophytic fungi [12]. Subsequently, several anticancer compounds have been isolated from endophytic fungi, such as campthothecin from Nothapodytes foetida, podophyllotoxin from Fusarium oxysporum, and cajanol from Hypocrea lixii [13]. Similarly, many important secondary metabolites like terpenoids, alkaloids, steroids, phenols, quinines, and flavonoids with various bioactivities have been isolated from several species of endophytic fungi. Some of them are sterigmatocystin from A. nidulans, Huperzine A from F. verticillioides and Corynesidone D from Corynespora cassiicola [14]. They also serve as a reservoir of many important commercial enzymes including tannase, laccase, chitinase, chitin deacetylase, acidic protease, alkaline protease, and several other enzymes [15]. L-asparaginase is one of such enzymes which can be produced by endophytic fungi. Several studies have reported L-asparaginase producing endophytic fungi from different medicinal plants. This review focuses on the significance of L-asparaginases from endophytic fungi.
Mechanism of Action of L-Asparaginase
L-asparagine is necessary for the synthesis of ribonucleic acid (RNA) and protein in both normal and lukemic cells. In normal cells, it is synthesized by the enzyme asparagine synthetase. On the other hand, lukemic cells are unable to synthesize L-asparagine due to the absence of asparagine synthetase. As a result, these cells depend upon L-asparagine present in surrounding cells and tissues. Thus, when L-asparaginase is administered into the bloodstream, it makes them deprived of L-asparagine. This leads to the inhibition of RNA and protein synthesis followed by cell cycle arrest and apoptosis, eventually leading to the death of leukemic cells [16]. The mechanism of action of L-asparaginase is described in Fig. 1.
Commercial L-Asparaginases
Four main types of L-asparaginase under different trade names have been used to date including the native L-asparaginase derived from E. coli, a PEGylated form of this enzyme (PEG-L-asparaginase), L-asparaginase derived from E. chrysanthemi, and a recombinant E. coli L-asparaginase preparation [17]. Native E. coli L-asparaginase is available as Kidrolase® (EUSA Pharma); Elspar® (Ovation Pharmaceuticals); Leunase® (Sanofi-aventis); PEGylated E. coli L-asparaginase is available as Oncaspar® (Baxalta Incorporated, Deerfield, IL; formerly Sigma‑Tau Pharmaceuticals, Inc., Gaithersburg, MD); and Erwinia L-asparaginase is available as Erwinaze® (Jazz Pharmaceuticals, Palo Alto, CA) [3].
Usually, patients showing susceptibility to one formulation of L-asparaginase are administered with another formulation. E. coli L-asparaginase and PEG-asparaginase are used for first-line treatment of ALL, whereas Erwinia L-asparaginase is used as second or third-line treatment [18]. The clinical use of these L-asparaginases still faces many problems as they cause many types of allergic reactions and toxicities. Despite their universal acceptance in the treatment of ALL, there is much debate regarding the optimal formulation and dosage of these agents [3]. The details are summarized in Table 1.
Sources of L-Asparaginase
The occurrence of L-asparaginase has been described in several organisms, such as animals, plants, and microbes. However, L-asparaginase from microbes is studied extensively as they confer several advantages over other sources, such as easy optimization of culture conditions, simplified extraction, and purification, and can be grown using simple substrates [6]. Also, the enzymes obtained from microorganisms are comparatively more stable when compared to enzymes acquired from plants or animals [19]. Besides, microbes can be genetically modified to obtain a high yield.
Bacterial Sources
The currently used L-asparaginase formulations are produced industrially from E. coli and E. chrysanthemi. L-asparaginase from both sources is similar in terms of the mechanism of action. However, their pharmacokinetic properties and toxicities are different [20]. In Gram-negative bacteria, the enzyme produced is intracellular in nature. Whereas, Gram-positive bacteria usually secrete enzymes into an external medium as they lack periplasmic space. For large scale production, extracellular secretion is more beneficial as it aids in downstream processing. Thus, Gram-positive bacteria are advantageous over Gram-negative bacteria [21]. Most of the L-asparaginase producing isolates are Enterobacteriaceae members. Some of the major L-asparaginase producing bacteria are E. coli [22], E. chrysanthemi [23], Corynebacterium glutamicum [24], Pseudomonas aeruginosa [25], Helicobacter pylori [26], Pyrococcus furiosus [17], Bacillus licheniformis [27], Serratia marcescens [28] and Pectobacterium carotovorum [29].
Fungal Sources
Fungi are the second largest sources of L-asparaginase and are estimated to overtake bacterial sources because of their efficiency. L-asparaginase obtained from fungi is easy to purify as it is released into an external medium [30]. Further, fungi can be grown easily using low-cost culture mediums like industrial wastes [31]. Some of the important L-asparaginase producing fungi are A. flavus [32], A. fumigatus [33], Trichoderma viride [34], Cladosporium sp. [35], F. equiseti [36], Flammulina velutipes [10] and Ganoderma australe [11].
Actinomycetes Sources
Actinomycetes also produce L-asparaginase. Among actinomycetes, the genera of streptomyces are an important source of L-asparaginase. Some of the examples are Streptomyces ginsengisoli [37], S. gulbargensis [38], S. noursei [39], S. thermoluteus [40], S. albidoflavus [41], and S. griseus [42].
Yeast Sources
L-asparaginase production is reported from several yeasts such as Candida utilis [43], Candida bombicola [44], Pichia polymorpha [45], Rhodosporidium toruloides [46] and Saccharomyces cerevisiae [47].
Algal Sources
Some of the algae such as Chlamydomonas sp. [48], Chlorella vulgaris [49], and Spirulina maxima [50] are also known to produce L-asparaginase.
Endophytic Fungal Sources
Endophytic fungi are one of the richest sources of L-asparaginase. Many plants have been screened for L-asparaginase producing endophytic fungi and several isolates are known to produce L-asparaginase. Chow et al., screened eighty-nine endophytic fungi from Pereskia bleo, Cymbopogon citratus, Oldenlandia diffusa, and Murraya koenigii for L-asparaginase production. Among them, twenty-five isolates exhibited positive results by showing pink zones around the colonies on modified Czapek dox (MCD) agar in primary screening. P. simplicissimum from Pereskia bleo grown in MCD broth under shaking condition showed the highest activity of 0.019 µM/ml/min in secondary screening by the nesslerization method [51]. Thus, showing medicinal plants are a potential source of L-asparaginase producing endophytic fungi. Especially, medicinal plants harbor thousands of fungal endophytes with potential bioactivities including their ability to produce L-asparaginase. Some of the endophytic Diaporthe sp. have shown great potential to produce L-asparaginase. Pádua et al., isolated sixteen L-asparaginase producing isolates from leaves of Myracrodruon urundeuva, and among the most prevailing fungal members from the genus Diaporthe and Colletotrichum, they identified Diaporthe sp. URM 7793 is the best producer of L-asparaginase with an enzyme activity of 2.41 IU/g in the secondary quantitative spectrometric method [52]. Diaporthe is generally considered multi-host fungal endophytes as they are found to occur frequently in varied tropical tree species of diverse environmental locations [53]. Many species of Diaporthe are reported to produce several enzymes including L-asparaginase [54].
Manasa and Nalini reported F. verticillioides a potential producer of L-asparaginase from leaves of Tabernaemontana heyneana with the enzyme activity of 1.136 IU/ml [55]. Another Fusarium sp. with an enzyme activity of 111.07 ± 1.53 IU/ml was isolated from the Carica papaya leaves [56]. The genera of Fusarium are considered to be a potential source of L-asparaginase. Previously, the production of L-asparaginase is reported from many Fusarium species such as F. culmorum [57], F. solani [58] and F. proliferatum [59]. In another study F. solani with an enzyme activity of 1.459 IU/ml was recovered from Withania somnifera [60]. Bhosale and As-Suhbani, reported the production of glutaminase free L-asparaginase by F. solani with the activity of 619.102 IU/ml and specific activity of 8.807 IU/mg isolated from Curcuma longa [61]. The enzyme activity reported is higher than those reported for L-asparaginase from several bacteria such as Bacillus subtilis [62], Ocimum tenuiflorum [63] and, Mesoflavibacter zeaxanthinifaciens [64].
Pleospora alli with an enzyme activity of 1.98 ± 0.16 IU/ml was recovered from Withania somnifera [65]. W. somnifera is a well-known medicinal plant used in the treatment of several clinical conditions including cancer. Withaferin-A and withanone from W. somnifera have demonstrated potential anticancer activity [66]. Further, Prihanto et al., reported L-asparaginase producing Aspergillus sp. and Trichoderma sp. from Avicennia germinans and Sonneratia alba, respectively [67, 68]. Aspergillus sp. is also an important source of L-asparaginase. L-asparaginase obtained from Aspergillus oryzae and A. niger, commercially known as PreventASe® (DSM) and Acrylaway® (Novozymes) are used in the food industry for the reduction of acrylamide, a carcinogenic substance formed in foods containing L-asparagine and reducing sugars, such as glucose and fructose when heated at high temperature [69]. Glutaminase free L-asparaginase was produced from the novel endophyte Chaetomium sp. [70]. Most of the toxic effects of L-asparaginase are related to its glutaminase activity. Therefore it is necessary to decrease glutaminase activity for the effective treatment of ALL. Further, L-asparaginase producing endophytic fungi L. theobromae with an enzyme activity of 31.5 µM/mL/min was recovered from Teucrium polium [71] and Talaromyces cf. cecidicola was isolated from Tillandsia catimbauensis with the enzyme activity of 2.30 U/g [72]. The production of L-asparaginase has been reported in several endophytic fungi. The L-asparaginase producing endophytic fungi isolated from different plants are presented in Table 2.
Production of L-Asparaginase by Endophytic Fungi
The production of L-asparaginase differs with the organism, the process of production, and the fermentation media used for production. Different methods are reported for the production of L-asparaginase, the two major methods employed are solid state fermentation (SSF) and submerged fermentation (SmF). SmF process is well-established but has certain limitations like very less net yield and high production cost [73]. In recent times, the production of L-asparaginase using agricultural raw materials by SSF fermentation has gained importance. SSF is economical and product yield is much higher as compared to the SmF [74]. It uses low cost agricultural by-products such as rice straw, wheat straw, orange peel, sugarcane bagasse, etc. as a substrate. Thus, it is environmentally friendly when compared to SmF. Ruma et al., based on ease of availability and cost effectiveness screened different substrates (corn flour, coconut oil cake, groundnut oil cake, rice bran, wheat bran, orange peel and tea waste) for the production of L-asparaginase, by endophytic fungus F. solani isolated from W. sominifera. They obtained maximum enzyme activity using orange peel as substrate [60]. The seven agricultural substrates displayed different degrees of fermentation abilities, showing that the choice of the right substrate is critical for the production of L-asparaginase. The substrate plays a vital role in the supply of nutrients to the growth of the cells and has a major effect on the anchoring of the growing cells [60]. In another study, Silva et al., screened seventeen endophytic fungi for L-asparaginase production using Opuntia ficus-indica and Nopalea cochenillifera as substrate and they suggested O. ficus-indica flour as the best inexpensive substrate for the production of L-asparaginase by the endophytic fungus D. ueckerae URM 8321 [75].
Many factors have a prominent effect on the SSF process. The major factors are pH, temperature, substrate, carbon source, nitrogen source, agitation rate, and incubation period. Among these, the most important constituents in the fermentation medium are carbon and nitrogen source. The effect of several carbon sources such as glucose, sucrose, fructose, lactose, maltose, xylose, and starch on L-asparaginase production has been studied and many studies have shown that glucose is the ideal carbon source for the production of L-asparaginase by endophytic fungi [35, 59, 76]. Uzma et al., screened five carbon sources (glucose, sucrose, maltose, lactose, and starch) for maximizing the production of L-asparaginase by the endophytic fungus F. solani isolated from Tinospora cordifolia under submerged fermentation conditions. However, in contrast to the general understanding, they recorded maximum enzyme activity with sucrose as a carbon source [77]. It is reported that the production of L-asparaginase needs a low amount of carbon as it is under catabolic repression [78]. In another study by Nagarajan et al., they found that high glucose concentration in the media as a carbon source inhibited colony growth and enzyme production of endophytic Alternaria sp. isolated from W. somnifera [79].
Nitrogen is a significant nutrient source for the growth of microorganisms. Reports have indicated that ammonium sulphate is the best nitrogen source to obtain a high yield of L-asparaginase by endophytic fungi [80,81,82]. Jenila et al., screened two inorganic (ammonium sulphate, ammonium nitrate) and two organic nitrogen (peptone, yeast extract) sources for the production of L-asparaginase by endophytic Fusarium sp. isolated from Adhatoda vasica. Maximum L-asparaginase production of 10.21 U/mL was obtained when ammonium sulphate was used as a nitrogen source. The influence of various concentrations of ammonium sulphate (5 to 25 g/L) was further studied for increasing the production of L-asparaginase and the highest enzyme activity of 13.69 U/mL was obtained at 20 g/L concentration of ammonium sulphate [80]. Additionally, a study was conducted to know the effect of two nitrogen sources i.e., L-asparagine and sodium nitrate on L-asparaginase production by endophytic Fusarium sp. isolated from the roots of Andrographis paniculata. The results revealed that sodium nitrate induced less L-asparaginase production when compared to L-asparagine [83]. This shows nitrogen source impacts fungal biomass and growth which subsequently influences L-asparaginase production.
The pH and temperature of the fermentation medium play an important role in the production of L-asparaginase. Several studies reported that the optimum pH for endophytic fungal L-asparaginase production ranges from 6.0 to 9.0 [72, 76, 77]. Similarly, temperature ranging from 25 and 40 °C is stated as the optimum temperature for L-asparaginase production by endophytic fungi [80, 84, 85]. Jalgaonwala and Mahajan carried out production of L-asparaginase under different pH and temperatures by endophytic Eurotium sp. isolated from rhizomes of C. longa and they observed maximum enzyme activity at a temperature of 40 °C and a pH of 8.0 [86]. In another study, a pH of 6.0 and a temperature of 30 °C were found to be optimum for L-asparaginase production by endophytic Aspergillus sp. isolated from Cassia fistula [82]. Further, a pH of 6.0 and incubation temperature of 30 °C was reported to be optimum for another Aspergillus sp. isolated from leaves of salt marsh Sueada monoica [81]
Every organism requires different conditions for high yield. Therefore, optimization of cultural conditions and media components is necessary. Different optimization methods are used to maximize the production of L-asparaginase. The conventional method of one factor at a time (OFAT) used for optimization leads to mistakes in understanding of results as it disregards the effects of interactions between the factors [87]. Currently, many statistical tools such as surface response methodology (RSM), Plackett–Burman design (PBD), and Box-Behnken design (BBD) have been used for optimization studies [10]. These methods have many benefits such as they require a smaller number of experiments, several factors can be easily studied and response can be predicted initially, thus, aiding in finding the most suitable conditions for the production [88]. Yap et al., applied both OFAT and RSM to increase the production of L-asparaginase from the endophytic fungus F. proliferatum isolated from C. citratus. They obtained similar results in both OFAT and RSM. The optimum conditions were 0.20% of glucose, 0.99% of L-asparagine, and 5.34 days of incubation at 30.50 °C. They also found that the L-asparaginase production increased from 16.75 ± 0.76 IU/mL to 22.42 ± 0.20 IU/mL after optimization [58]. In another study, six factors (carbon, nitrogen source, and concentrations, incubation time, incubation temperature, pH, and agitation rate) were screened using the traditional OFAT method, and four significant variables were further optimized using Central Composite Rotatable Design (CCRD) for L-asparaginase production by Colletotrichum gloeosporioides. The optimum conditions shown by the OFAT and CCRD results were, 0.2% w/v glucose, 1% w/v L-asparagine, and 4 days incubation period at a temperature of 25 °C. Under the optimized conditions, the production of L-asparaginase significantly increased from 15.14 ± 0.25 IU/mL to 23.51 ± 0.13 IU/mL [89].
Araújo-Magalhães et al., used a 23 factorial design with three variables (pH, concentration of L-asparagine, and inoculum concentration) to optimize the production of L-asparaginase by endophytic fungus Phyllosticta catimbauensis isolated from Mandevilla catimbauensis. The production of L-asparaginase varied between 0.61 and 2.25 U/g and the maximum enzyme production (2.25 U/g) was achieved at pH 5.0, 1.5% L-asparagine, and 1.5% inoculum concentration. Further, based on the effect of independent variables an experiment was carried out to obtain a high yield by adjusting variables. In this experiment, 3.5 U/g of L-asparaginase production was achieved at pH 4.2, 3.5% L-asparagine, and 1.0% inoculum concentration. They found that through optimization the production of L-asparaginase was increased by 36.02% [90]. In another study Silva et al. used a similar 23 factorial design to study the effect of different variables on enzyme production from the endophytic fungus T. cf. cecidicola isolated from Tillandsia catimbauensis. They analyzed three variables that were pH, the concentration of L-proline, and spore concentration. Maximum dry biomass (0.66 g) production was achieved under pH 6.0, 1% L-proline, and 1 × 108 spore concentration and L-asparaginase production varied between 0.58 and 1.02 U/g. However, the analysis showed that the optimal point for the production of L-asparaginase was not achieved [72]. Further, the production of L-asparaginase by L. theobromae was optimized using the Taguchi model under four variables i.e., temperature, L-asparagine, glucose, and pH. The enzyme activity ranged from 10 to 175 IU/mL. However, after induction, the enzyme activity was found to be 315 IU/mL [85].
The incubation period and aeration also influence L-asparaginase production. El-Said et al., studied the effect of the incubation period on the production of L-asparaginase from endophytic fungi A. niger isolated from leaves of Datura innoxia and the highest production of L-asparaginase was achieved at shorter incubation period of 5 days [76]. Krishnapura and Belur studied the impact of agitation rate (100–150 rpm) on L-asparaginase production by the endophytic fungus T. pinophilus isolated from the rhizome of C. amada. Although an agitation rate of 100 rpm favoured the growth of the fungus it reduced the production of L-asparaginase. They recorded that an agitation rate of 120 rpm was found to be most appropriate for both biomass and enzyme production [84]. Most of the reports have indicated that at an agitation rate of around 120 rpm and an incubation period of 5 to 6 days, maximum production of L-asparaginase is easily achieved [59, 81, 89].
The above studies confirm that L-asparaginase production by endophytic fungi is affected by several parameters mainly pH, temperature, carbon source, nitrogen source, and substrate. These parameters vary from one organism to another. The study of the effect of process parameters and their optimization helps to increase the yield of the enzyme. A schematic representation of L-asparaginase production from the endophytic fungi is illustrated in Fig. 2.
Conclusion
L-asparaginase has become one of the most important drugs in anticancer therapy, specifically in the treatment of ALL. Although it is can be obtained from many sources, microbes are preferred owing to several advantages, mainly bacteria. However, it is found that the commercially available L-asparaginases from bacteria are coupled with many side effects and also the yield of an enzyme is not enough to fulfill the demand. Thus, there is a necessity for potent L-asparaginase producer strains with improved activity and reduced immunogenicity. Endophytic fungi from medicinal plants have shown great ability to produce L-asparaginase and some have exhibited prominent L-asparaginase activity. Further, optimization of cultural conditions of endophytic fungi have resulted in increasing the yield of L-asparaginase. Thus, endophytic fungi from medicinal plants can be potent source of L-asparaginae. However, biochemical characterization of these L-asparaginases are required to establish them as potential alternatives for bacterial L-asparaginases.
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Parashiva, J., Nuthan, B.R., Rakshith, D. et al. Endophytic Fungi as a Promising Source of Anticancer L-Asparaginase: A Review. Curr Microbiol 80, 282 (2023). https://doi.org/10.1007/s00284-023-03392-z
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DOI: https://doi.org/10.1007/s00284-023-03392-z