Abstract
In this study, we evaluated methods for reliably estimating leaf area index (LAI) and gap fraction in two different types of broad-leaved forests by the use of airborne light detection and ranging (LiDAR) data. We evaluated 13 estimation variables related to laser height, laser penetration rate, and laser point attributes that were derived from LiDAR analyses. The relationships between LiDAR-derived estimates and field-based measurements taken from the forests were evaluated with simple linear regressions. The data from the two forests were analyzed separately and as an integrated dataset. Among the laser height variables, the coefficient of variation (CV) of all laser point heights had the highest level of accuracy for estimating both LAI and gap fraction. However, we recommend that more evaluations be conducted prior to the use of CV in forests with complex structures. The simplest laser penetration variable, which represents the ratio of the number of ground points to the total number of all points (P ALL), also had a high level of accuracy for estimating LAI and gap fraction at the study sites regardless of whether the data were analyzed separately or as an integrated data set. Furthermore, P ALL values showed near 1:1 relationships with the field-based gap fraction values. Hence, the use of P ALL may be the most practical for estimating LAI and gap fraction in broad-leaved forests, even when the canopies are heavily closed.
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Introduction
Forest leaf area index (LAI) and gap fraction are two important parameters that are used to describe forest structure. The LAI, which is defined as one half of the total leaf area per unit ground surface area (Jonckheere et al. 2004), correlates closely to the functions of photosynthesis and evapotranspiration, and it is used to model many processes related to carbon exchange and the regulation of climate by forests (Jonckheere et al. 2004; Hardin and Jensen 2007). Gap fraction, which represents the proportion of the forest canopy open to the sky and is the complement of canopy fractional cover, correlates closely to the penetration of solar radiation that affects the growth of forest biota such as seedlings (Nakamura et al. 2004). The accurate estimation of LAI and gap fraction is important for proper management to maximize and enhance the functions of forests. Unfortunately, costly and time-consuming field surveys are needed to estimate these parameters and these surveys can only be conducted over a limited spatial extent.
Remote sensing technology offers a cost-effective method for surveying wide areas of land. A number of research studies, using satellite and airborne passive optical remote sensing systems, have reported estimates of forest LAI and gap fraction (or fractional cover). Many researchers have used vegetation indices such as the normalized differential vegetation index (NDVI) (e.g., Nemani and Running 1989; Spanner et al. 1990; Chen and Cihlar 1996; Carlson and Ripley 1997; Cohen et al. 2003; Colombo et al. 2003). However, measurements collected by these passive optical remote sensing technologies have several disadvantages. For example, forestry data collected by passive remote sensing technology can be influenced by solar elevation angles and weather conditions, and such data often underestimate true LAI values because many of the vegetation indices become saturated at high levels of forest biomass and LAIs (Chen and Cihlar 1996).
Light detection and ranging (LiDAR) is an active remote sensing technology that directly obtains the distance between the sensor and a target surface by emitting laser pulses and determining the elapsed time between the emission and arrival of the signal (Lefsky et al. 2002). The use of LiDAR technology has increased greatly since the 1990s. One of the most important advantages of using LiDAR in forested areas is that the technology can acquire important data such as ground elevation inside the forest by penetrating the tree canopy. In other words, unlike passive optical remote sensing technologies, LiDAR instruments can acquire vertical, in addition to horizontal, information about the forest. Furthermore, measurements using LiDAR are less susceptible to shadows and weather conditions (Baltsavias 1999). Accordingly, the use of LiDAR technology could be very beneficial for deriving a cost-effective description of complex forest structures (Nelson et al. 1988; Lefsky et al. 2002).
Previous LiDAR-based studies have estimated forest structure parameters such as forest height (Popescu et al. 2002; Coops et al. 2007), biomass (Lim and Treitz 2004; Næsset and Gobakken 2008), and timber volume (Packalén and Maltamo 2006; Donoghue et al. 2007). Several studies have also estimated forest LAI, gap fraction, and fractional cover using various indices derived from LiDAR data such as laser height metrics and laser penetration rates of the canopy (Riaño et al. 2004; Morsdorf et al. 2006; Sasaki et al. 2008; Richardson et al. 2009).
A few studies have attempted to establish regional scale LiDAR models that would be applicable for use over two or more forested areas. Jensen et al. (2008) estimated LAIs in two conifer forests using LiDAR and SPOT5 data, and found that LiDAR-only models can account for a significant amount of the variation in field-based LAI measurements for individual study areas and also when generalized over larger regions. Hopkinson and Chasmer (2009) tested models to estimate fractional cover across multiple forests using LiDAR-based metrics related to the laser penetration of canopies. While these studies are valuable, more studies of this nature are needed to validate the use of this promising technology for regional forestry applications. Especially, more studies are needed from different types of forests for the establishment of robust LiDAR estimation methods.
The development of LiDAR estimation methods for broad-leaved forests, which are common in Japan, has been limited. In this study, we targeted two broad-leaved forests in Japan and aimed to establish robust methods for estimating LAI and gap fraction values that would be applicable for use in different types of broad-leaved forests. This was accomplished by comparing 13 LiDAR estimation variables related to laser height, laser penetration rate, and laser point attributes to field-based measurements of LAI and gap fraction.
Methods
Study sites
The study area was comprised of two distinct forests in the Kansai region of Japan (Fig. 1). Both forests were located in the warm-temperate zone where the climax vegetation consisted of evergreen broad-leaved trees.
The Expo ‘70 Commemorative Park (135°31′32′E, 34°47′48′N) is located in Suita City, Osaka Prefecture. After the World Exposition in 1970, the site was covered with imported local soils from the neighboring hills. The park was re-vegetated over a period from 1972 to 1976 (Morimoto et al. 2006) with evergreen broad-leaved trees and some deciduous broad-leaved trees. Presently, more than 30 years after the reclamation, the planted trees have reached heights of up to 20 m. The main tree species include Quercus glauca, Cinnamomum camphora, and Castanopsis cuspidata in the evergreen stands, and Quercus serrata, Quercus acutissima, and Prunus jamasakura in the deciduous stands. The ground elevation of the park varies moderately between 40 and 61 m above sea level. The area of the evergreen broad-leaved forest covers approximately 0.291 km2, and the area of deciduous broad-leaved forest covers approximately 0.045 km2.
Constructed in 1655, the Shugakuin Imperial Villa (135°48′E, 35°03′N) is located in the city of Kyoto, Kyoto Prefecture. The mountainous forest surrounding the villa was incorporated into the design of the villa’s gardens as “borrowed scenery,” and it is managed for aesthetic purposes. This forest covers an area of approximately 0.544 km2, and it has a complex topography that varies between 100 and 343 m above sea level. For our research, we targeted the broad-leaved stands in the forest that consisted primarily of deciduous tree species including Quercus serrata, Quercus variabilis, and Ilex pedunculos, and a few evergreen species including Quercus glauca and Cleyera japonica.
Hereafter, we refer to the Expo ‘70 Commemorative Park as the “Expo ‘70 park,” and the mountainous forest surrounding the Shugakuin Imperial Villa as the “Shugakuin forest.”
Field data collection
We established 23 study plots in the Expo ‘70 park (E1–E23) and 17 plots in the Shugakuin forest (S1–S17) (Fig. 1; Table 1). The plot sizes ranged from 100 m2 (10 m × 10 m) to 400 m2 (20 m × 20 m) depending on the tree density and the topography of the stands. Hemispherical photographs were taken at five or more points in each plot using a digital Coolpix 995 camera (Nikon Co., Tokyo, Japan) equipped with a FC-E8 fish-eye lens (Nikon Co.) leveled on a tripod 1.3 m above the ground. We avoided large trees that were nearby when taking field measurements to prevent their irregular influence. We took at least three photographs with different exposures at each measurement point, and used the most representative photograph (i.e., the one that had a good contrast between the sky and foliage) in our analyses. The measurements were conducted during overcast weather conditions between the months of July and September in 2008. The locations of all of the plots were determined using a GPS system (GPS Pathfinder ProXH, Trimble Navigation Ltd., California, USA) and a pocket compass (Tracon LS-25, Ushikata Co., Yokohama, Japan). Because of the steeper terrain in the Shugakuin forest, the slope for each plot was measured at the center of the plot to take into consideration the influence of topography.
The gap fraction was calculated from photographs using CanopOn 2 software (Takenaka 2009). This software divides a hemispherical photograph into 11 annulus rings that are split at 8.6°, 16.0°, 24.3°, 32.4°, 40.9°, 49.9°, 57.8°, 65.0°, 73.2°, 81.7°, and 90.0°. The software calculates 11 gap fraction values according to integrated annuli from 0–8.6° to 0–90.0°. We calculated the gap fraction within the range that was not influenced by topography in each plot.
The effective LAI values were calculated for each integral annulus with a program that calculates LAI values using an assumption of a spherical leaf angle distribution based on that of Norman and Campbell (1989). The effective LAI is the value of the LAI when the canopy is assumed to be randomly distributed (Jonckheere et al. 2004). For broadleaf canopies, the effective LAI is often adopted as a substitute for the true LAI (e.g., Muraoka and Koizumi 2005; Riaño et al. 2004). Hereafter, we report the calculated effective LAI simply as the LAI.
LiDAR data collection and processing
The airborne LiDAR data were collected over the study areas using a RIEGL LMS-Q560 sensor (Riegl Laser Measurement Systems GmbH, Horn, Austria) mounted on a helicopter platform on July 23, 2008 (Shugakuin forest) and August 22, 2008 (Expo ‘70 park). This system projects near-infrared laser beams (1,550 nm) and records the full waveform of the reflection. The pulse frequency was 150 kHz and the scanning angle was ±30°. The flying height was 300 m above ground level and the beam divergence was 0.5 mrad, yielding a ground footprint of approximately 0.15 m in diameter. The flight speed was around 92.6 km h−1. A back-and-forth flight pattern was conducted to survey the entire area.
The full-waveform data from the entire area were converted into discrete points using the RiANALYZE software of RIEGL (RIEGL Laser Measurement Systems GmbH, 2009) by the Nakanihon Air Service Co., Ltd., Japan. This software detects local amplitude maxima above a certain threshold value by applying Gaussian pulse estimation. All of the created points have x, y, and z coordinate values and any of the following attributes: “first,” “intermediate,” “last,” or “only” returns. The attributes “first,” “intermediate,” and “last” returns refer to the order in which the projected laser hits the canopy components while passing through the canopy. If all of the energy of a projected laser is returned at the same time, it is recorded as an “only” return. All created points have intensity values representing the reflected pulse energy amplitude.
Terrascan software (TerraSolid Ltd., Helsinki, Finland) was used for processing the point cloud data. For all points, we derived the height above the ground using a 0.5 m mesh digital elevation model (DEM) created by building a triangulated surface model. The points 1.3 m above the ground were classified as “vegetation” points, and the residual points as “ground” points. The threshold of 1.3 m is the height at which the lens was placed when we took the hemispherical photographs. Note that the classes the “ground” and “vegetation” are independent of the point echo types (i.e., first, intermediate, last, and only returns) for the raw data.
The predictor variables related to laser point height, laser penetration rate, and laser point attributes were calculated for individual plots (Table 2). The laser height variables included the mean (MEAN), maximum (MAX), standard deviation (SD), and coefficient of variation (CV) of all return heights, and the mean (MEANVEG), standard deviation (SDVEG), and coefficient of variation (CVVEG) of vegetation return heights. For the laser penetration rate, we calculated the following five variables:
where N All, N Ground, N First, N Last, and N Only represent the number of all points, ground points, “first” returns, “last” returns, and “only” returns for individual plots, respectively. We also counted the number of “first”, “last”, and “only” returns within the ground points (N GroundFirst, N GroundLast, and N GroundOnly). The parameters I All, I Ground, I First, I Intermediate, I Last, and I Only represent the sum of intensity values of all points, ground points, “first” returns, “intermediate” returns, “last” returns, and “only” returns, respectively. The parameters I GroundLast and I GroundOnly represent the sum of intensity values of “last” and “only” returns within the ground points respectively. The PIBL is the complement of the FCLidar(BL), which is the Beer’s Law modified fractional cover equation proposed by Hopkinson and Chasmer (2009). This equation takes into consideration the fact that intermediate and last returns are residual energies after previous returns in the travel paths of the emitted laser pulses, and are attenuated in both incoming and outgoing transmission processes.
For the laser point attributes, we calculated the following variable:
where N VegetationFirst and N VegetationOnly represent the numbers of “first” returns and “only” returns within the vegetation points, respectively.
Statistical analyses
A simple linear regression analysis was used to evaluate the strength of the relationship between the LiDAR data collected from Expo ‘70 park and Shugakuin forest and field-based measurements of LAI and gap fraction. The data from the two forests were analyzed separately and as an integrated dataset. Leave-one-out-cross-validation (LOOCV) was performed, and the predicted residual sum of squares (PRESS) was calculated. The efficiencies of predictor variables were examined by the use of coefficients of determination (R 2) and root mean square errors (RMSEs) that accounted for the results of the LOOCV. Specifically, these were PRESS R 2 and RMSEV. All statistical analyses were performed using R version 2.13.1 software (R Development Core Team 2011).
Results
Determination of the best hemispherical photograph annulus
Figure 2 shows examples of cross-sectional LiDAR returns for each study site. All plots in the Expo ‘70 park were on relatively flat topography, whereas many plots in the Shugakuin forest were on a steep terrain. Because the steepest plot in the Shugakuin forest exhibited a slope of 41.2°, we excluded annuli over 40.9° from the hemispherical photographs to avoid the influence of topography when calculating gap fraction and LAI. In addition to the influence of topography, large annuli can cause sampling errors by including adjoining stands, while small annuli can cause the dispersion of values in each plot because they are limited to observing only the narrow area directly overhead of the camera. In consideration of these issues, we chose to use data from the annulus range of 0–32.4° in our study. Table 1 shows the mean values and standard deviations of field measurements of LAI and gap fraction for each plot.
LAI estimation
Table 2 shows the results of regression analyses between the LiDAR-based variables and the field-based measurements LAI and gap fraction for the Expo ‘70 park, the Shugakuin forest, and the integrated dataset. The scatter diagrams and regression lines are illustrated in Fig. 3 (LAI) and Fig. 4 (gap fraction).
Among the laser height variables, the CV had the best LAI estimation accuracies for the Expo ‘70 park data (PRESS R 2 = 0.775, RMSEv = 0.582) and the integrated data (PRESS R 2 = 0.706, RMSEv = 0.617), and the third highest accuracy for the Shugakuin forest data (PRESS R 2 = 0.449, RMSEv = 0.747). The MEAN had the highest accuracy for the Shugakuin forest data (PRESS R 2 = 0.511, RMSEv = 0.704), but it was not effective in the Expo ‘70 park (PRESS R 2 < 0). The MEANVEG and CVVEG, respectively, had lower accuracies than the MEAN and CV in all datasets. The MAX, SD, and SDVEG had low estimation accuracies in all datasets.
In regards to the laser penetration variables, P ALL had the highest PRESS R 2 values (Expo ‘70 = 0696; Shugakuin = 0.503; Integrated = 0.582) and the lowest RMSEv values (Expo ‘70 = 0676; Shugakuin = 0.710; Integrated = 0.736) in all datasets. The estimation accuracies of P FO and PI were low in all datasets. As for P LO and PIBL, the PRESS R 2 values were higher than 0.6 for the Expo ‘70 park data and higher than 0.5 in the integrated dataset.
The laser attribute variable, termed A VO, showed a high estimation accuracy for the Expo ‘70 park data (PRESS R 2 = 0.761, RMSEv = 0.600), but a low accuracy for estimating LAI in the Shugakuin forest.
Gap fraction estimation
Among the laser height variables, the CV showed the highest PRESS R 2 values (Expo ‘70 = 0.783; Shugakuin = 0.596; Integrated = 0.771) and lowest RMSEv values (Expo ‘70 = 0.041; Shugakuin = 0.030; Integrated = 0.035) in all the datasets. The CVVEG had the second highest accuracies for the Expo ‘70 park data and the integrated data, but low accuracy in Shugakuin forest. The other height values, MEAN, MAX, SD, MEANVEG, and SDVEG, showed low estimation accuracies.
For the laser penetration variables, the estimation accuracies were higher in the Expo ‘70 park than in the Shugakuin forest. The estimation accuracies for gap fraction were higher than those for LAI for almost all variables analyzed except for P FO, which had low estimation accuracies for both LAI and gap fraction in the Shugakuin forest (see Table 2). The variable, P ALL, had stable and high PRESS R 2 values (Expo ‘70 = 0.884; Shugakuin = 0.733; Integrated = 0.841) and low RMSEv values (Expo ‘70 = 0.030; Shugakuin = 0.024; Integrated = 0.029). We used bold lines to highlight 1:1 relationships in the diagrams depicting laser penetration variables in Fig. 4. The results of regression analyses between P ALL and gap fraction showed a near 1:1 relationship for the Expo ‘70 park data and the integrated data, although the P ALL underestimated the gap fraction for the Shugakuin forest data. The P FO exhibited small values and became zero for five plots in the Expo ‘70 park and six plots in the Shugakuin forest, resulting in a marked underestimation of the gap fraction. As for the other variables, P LO, PI, and PIBL, the PRESS R 2 values were higher than 0.9 for the Expo ‘70 park data and higher than 0.5 for the Shugakuin forest data, although the regression lines deviated from 1:1 relationships.
For A VO, a relatively high estimation accuracy was shown in the Expo ‘70 park (PRESS R 2 = 0.586, RMSEv = 0.057), but a low A VO accuracy was seen in the Shugakuin forest (Table 2). This pattern was similar to what was observed for LAI estimates.
Discussion
Laser height variables
Among the laser height variables, the CV had the highest levels of accuracy for estimating both LAI and gap fraction, with the exception of LAI estimation in the Shugakuin forest. The CV represents the relative dispersion of the vertical laser point height distribution, which has been shown to be a good predictor for discriminating among stands of different canopy densities (Donoghue et al. 2007; Bater et al. 2009). In dense forests, many laser points concentrate in the upper canopy and few laser pulses reach the ground, resulting in small CV values. In contrast, if the canopy has few leaves, most laser pulses penetrate the canopy and reach the ground resulting in the dispersion of point height and larger CV values. The CVVEG showed lower estimation accuracies than the CV. This was likely because the ground returns emphasized the vertical dispersion of height in low-density plots, resulting in larger variances of CV than CVVEG. (Figs. 3, 4).
The estimation accuracies for CV values in the Expo ‘70 park were higher than in the Shugakuin forest. The trees of the Expo ‘70 park were planted during a short period in the 1970s, and many plots are now dominated by evergreen broad-leaved trees of similar height. These plots also have heavily closed canopies and poor stratification structures (Morimoto et al. 2006). This type of homogeneity in the forest structure may have led to distinctly small CV values. On the other hand, the use of CV was less reliable for estimating the LAI of the Shugakuin forest (i.e., the PRESS R 2 value was <0.5) (Table 2). This may have been a result of the complex vertical stratifications of some plots in the Shugakuin forest, where increases in the LAI did not always lead to an increase of canopy surface density.
Therefore, these results suggest that the CV is not a variable that is directly related to leaf abundance, and it can be affected by forest stratification structures such as those in the sub-canopy and shrub layers. In consideration of these findings, we recommend that more evaluations be conducted prior to the use of CV for estimating LAI and gap fraction, especially in forests with complex structures.
Laser penetration variables
The laser penetration variables showed higher accuracies in estimating gap fraction than in estimating LAI. According to Beer’s law, the gap fraction decreases exponentially as the LAI increases, and small variations in low gap fraction values correspond to large variations in the LAI. In this study, most of the plots that we analyzed had closed canopies and gap fractions that were lower than 0.2 (Table 1). These characteristics seemed to amplify errors in the LAI values. In addition, the estimation accuracies of the laser penetration variables were higher in the Expo ‘70 park than in the Shugakuin forest (Table 2). This was likely because the Expo ‘70 park had a gentle topography and a more homogeneous forest structure within each plot that led to a reduction in estimation errors, whereas the Shugakuin forest had steep slopes and a more heterogeneous forest structure.
In past studies, the complement of the P FO has been used for estimations of LAI and canopy cover (Miura and Jones 2010; Korhonen et al. 2011). However, this was not possible in the present study because P FO values were very small in many plots. The practical use of the P FO for estimating forest structure in the broad-leaved forests examined in this study was limited due to their closed canopies and high LAI values (>5) in many plots (Table 1). Because the laser footprint (0.15 m) used in this study was larger than the small gaps in closed forest canopies, most of the “first” returns and “only” returns likely hit the tops of the canopies, and missed many of the small gaps (Solberg et al. 2009). Interestingly, the P LO had higher estimation accuracies than the P FO. This could possibly be because the P LO simply targets the returns that penetrated the canopy, and is less sensitive to dense canopies compared to the P FO. Although, the P LO tended to overestimate high gap fraction values (Fig. 4). This may be because the P LO ignores the first hit on the canopy surface, which can cause overestimation when the canopy gap is sufficient enough in size that laser beams can penetrate the canopy.
Consistent with past studies on individual forests (Sasaki et al. 2008; Richardson et al. 2009), estimations accuracies by P ALL were stable and high for both LAI and gap fraction values in all datasets. Furthermore, correlations between P ALL and gap fraction had near 1:1 relationships. The use of all returns provided a sufficient sample density, and seemed to offset any tendencies for underestimation when using “first” returns and overestimation when using “last” returns. These results imply that the simplest penetration variable, P ALL, would be useful for deriving stable estimates of LAI and gap fraction in broad-leaved forests.
With regard to the variables based on intensity data, the PI showed low accuracies for estimating the LAI, but this was improved by using the PIBL. These improvements likely resulted because any errors were mitigated by taking into consideration the energy losses associated with each laser point attribute (Hopkinson and Chasmer 2009). For gap fraction estimation, the PI had PRESS R 2 values >0.9 for the Expo ‘70 park and >0.5 for the Shugakuin forest, but the PI values were lower than 0.1 for many plots (Figs. 3, 4). This was mitigated to some extent by the use of the PIBL (Figs. 3, 4). In contrast to the case described by Hopkinson and Chasmer (2009), the relationships we observed between PIBL and field-based gap fraction values deviated from 1:1 relationships. A possible reason for this is that the intensity represents the reflection value of infrared laser beams (1550 nm), and this value can differ depending on the objects that are hit (i.e., such as vegetation and ground), and the types of trees and plant species that are present in the study area.
Laser attribute variable
The variable, A VO, showed high estimation accuracies in the Expo ‘70 forest, but low accuracies in the Shugakuin forest for both LAI and gap fraction. Because many stands in the Expo ‘70 park are composed of similar-aged trees, the plots dominated by evergreen broad-leaved tree species had less canopy surface roughness (Fig. 2). This resulted in many “only” returns hitting the canopy surface at the same time within a given footprint area. In contrast, the Shugakuin forest is a secondary forest that has been managed for a long time, and it contains many plots with higher amounts of canopy surface roughness regardless of leaf abundance levels. This aspect of the forest structure likely resulted in less “only” returns. In consideration of these observations, A VO appears to be a less stable estimation parameter when compared to the other laser penetration variables, and it seems useful only for forests that have relatively homogeneous structures and uniform tree heights.
Conclusions
In this study, we evaluated methods for reliably estimating LAI and gap fraction in two different types of broad-leaved forests by the use of airborne LiDAR data. Among the predictor variables, the CV had high estimation accuracies, but it was less effective when targeting forests that had complex vertical structures. The simplest laser penetration variable, P ALL, also had a high level of accuracy for estimating both LAI and gap fraction at the two study sites regardless of whether the data were analyzed separately or as an integrated data set. The P ALL values showed near 1:1 relationships with the field-based gap fraction values. Additionally, the use of P ALL has been shown to be valuable in past studies of individual forests. These findings suggest that P ALL estimates may be the most stable indicators to use in various types of forest. Hence, we conclude that P ALL may be the most practical LiDAR-based variable to use for estimating LAI and gap fraction in broad-leaved forests.
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Acknowledgments
We wish to acknowledge the staff of the Commemorative Organization for the Japan World Exposition ‘70 and Japanese Imperial Household Agency for their support in field observation.
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Sasaki, T., Imanishi, J., Ioki, K. et al. Estimation of leaf area index and gap fraction in two broad-leaved forests by using small-footprint airborne LiDAR. Landscape Ecol Eng 12, 117–127 (2016). https://doi.org/10.1007/s11355-013-0222-y
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DOI: https://doi.org/10.1007/s11355-013-0222-y