The Evolution of Guanylyl Cyclases as Multidomain Proteins: Conserved Features of Kinase-Cyclase Domain Fusions Kabir Hassan BiswasAvinash R. ShenoySandhya S. Visweswariah OriginalPaper 03 June 2009 Pages: 587 - 602
On the Brink of Holoparasitism: Plastome Evolution in Dwarf Mistletoes (Arceuthobium, Viscaceae) Daniel L. NickrentMiguel A. García OriginalPaper 29 May 2009 Pages: 603 - 615
What Was the Set of Ubiquitin and Ubiquitin-Like Conjugating Enzymes in the Eukaryote Common Ancestor? Caroline MichellePatrick Vourc’hChristian R. Andres OriginalPaper Open access 19 May 2009 Pages: 616 - 628
Phylogenetic Analysis of Zebrafish Basic Helix-Loop-Helix Transcription Factors Yong WangKeping ChenZhe Yang OriginalPaper 16 May 2009 Pages: 629 - 640
Conservation of Silk Genes in Trichoptera and Lepidoptera Naoyuki YonemuraKazuei MitaFrantišek Sehnal OriginalPaper Open access 16 May 2009 Pages: 641 - 653
Evolution of Transcription Factor Binding Sites in Mammalian Gene Regulatory Regions: Handling Counterintuitive Results James E. BalmerRune Blomhoff OriginalPaper 29 May 2009 Pages: 654 - 664
The Complete Mitochondrial Genome Sequence of the Hornwort Megaceros aenigmaticus Shows a Mixed Mode of Conservative Yet Dynamic Evolution in Early Land Plant Mitochondrial Genomes Libo LiBin WangYin-Long Qiu OriginalPaper 28 May 2009 Pages: 665 - 678
Gene Conversion Among Paralogs Results in Moderate False Detection of Positive Selection Using Likelihood Methods Claudio CasolaMatthew W. Hahn OriginalPaper 27 May 2009 Pages: 679 - 687
A Comparative Approach Shows Differences in Patterns of Numt Insertion During Hominoid Evolution M. I. Jensen-SeamanJ. H. WildschutteN. M. Anthony OriginalPaper 27 May 2009 Pages: 688 - 699
In Silico Prediction of Two Classes of Honeybee Genes with CpG Deficiency or CpG Enrichment and Sorting According to Gene Ontology Classes Yong WangFrederick C. C. Leung OriginalPaper 23 May 2009 Pages: 700 - 705
An Unusual Recent Expansion of the C-Terminal Domain of RNA Polymerase II in Primate Malaria Parasites Features a Motif Otherwise Found Only in Mammalian Polymerases Sandeep P. KishoreSusan L. PerkinsKirk W. Deitsch OriginalPaper 16 May 2009 Pages: 706 - 714
Structure and Conservation of Tandem Repeats in the Mitochondrial DNA Control Region of the Least Brook Lamprey (Lampetra aepyptera) Matthew M. WhiteHolly R. Martin OriginalPaper 16 May 2009 Pages: 715 - 723