Volume 15, issue 9, September 2014
25 articles in this issue
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A general framework for analyzing tumor subclonality using SNP array and DNA sequencing data
Authors
- Bo Li
- Jun Z Li
- Content type: Method
- Open Access
- Published: 25 September 2014
- Article: 473
This is part of 1 collection: -
Dynamic evolution of clonal epialleles revealed by methclone
Authors (first, second and last of 14)
- Sheng Li
- Francine Garrett-Bakelman
- Christopher E Mason
- Content type: Method
- Open Access
- Published: 27 September 2014
- Article: 472
This is part of 1 collection: -
Spatial and temporal evolution of distal 10q deletion, a prognostically unfavorable event in diffuse low-grade gliomas
Authors (first, second and last of 23)
- Hinke F van Thuijl
- Ilari Scheinin
- Bauke Ylstra
- Content type: Research
- Open Access
- Published: 23 September 2014
- Article: 471
This is part of 1 collection: -
Deciphering clonality in aneuploid breast tumors using SNP array and sequencing data
Authors (first, second and last of 17)
- Ingrid M Lönnstedt
- Franco Caramia
- Terence P Speed
- Content type: Method
- Open Access
- Published: 01 October 2014
- Article: 470
This is part of 1 collection: -
Global loss of DNA methylation uncovers intronic enhancers in genes showing expression changes
Authors (first, second and last of 7)
- Adam Blattler
- Lijing Yao
- Peggy J Farnham
- Content type: Research
- Open Access
- Published: 20 September 2014
- Article: 469
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The genome sequence of the Antarctic bullhead notothen reveals evolutionary adaptations to a cold environment
Authors (first, second and last of 14)
- Seung Chul Shin
- Do Hwan Ahn
- Hyun Park
- Content type: Research
- Open Access
- Published: 25 September 2014
- Article: 468
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Allelic mapping bias in RNA-sequencing is not a major confounder in eQTL studies
Authors (first, second and last of 4)
- Nikolaos I Panousis
- Maria Gutierrez-Arcelus
- Tuuli Lappalainen
- Content type: Research
- Open Access
- Published: 20 September 2014
- Article: 467
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DiffVar: a new method for detecting differential variability with application to methylation in cancer and aging
Authors
- Belinda Phipson
- Alicia Oshlack
- Content type: Method
- Open Access
- Published: 23 September 2014
- Article: 465
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Cancer genomics just got personal
Authors
- Rafal T Marszalek
- Content type: Editorial
- Open Access
- Published: 01 October 2014
- Article: 464
This is part of 1 collection: -
Tumor heterogeneity: next-generation sequencing enhances the view from the pathologist's microscope
Authors
- Samuel Aparicio
- Elaine Mardis
- Content type: Editorial
- Open Access
- Published: 01 October 2014
- Article: 463
This is part of 1 collection: -
Toward better benchmarking: challenge-based methods assessment in cancer genomics
Authors (first, second and last of 5)
- Paul C Boutros
- Adam A Margolin
- Gustavo Stolovitzky
- Content type: Opinion
- Open Access
- Published: 17 September 2014
- Article: 462
This is part of 1 collection: -
Individualizing kinase-targeted cancer therapy: the paradigm of chronic myeloid leukemia
Authors
- Anna M Eiring
- Michael W Deininger
- Content type: Review
- Open Access
- Published: 17 September 2014
- Article: 461
This is part of 1 collection: -
Prediction of LDL cholesterol response to statin using transcriptomic and genetic variation
Authors (first, second and last of 6)
- Kyungpil Kim
- Eugene Bolotin
- Ronald M Krauss
- Content type: Research
- Open Access
- Published: 30 September 2014
- Article: 460
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Genome analysis of a major urban malaria vector mosquito, Anopheles stephensi
Authors (first, second and last of 35)
- Xiaofang Jiang
- Ashley Peery
- Zhijian Tu
- Content type: Research
- Open Access
- Published: 23 September 2014
- Article: 459
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DNA demethylases target promoter transposable elements to positively regulate stress responsive genes in Arabidopsis
Authors (first, second and last of 12)
- Tuan-Ngoc Le
- Ulrike Schumann
- Ming-Bo Wang
- Content type: Research
- Open Access
- Published: 17 September 2014
- Article: 458
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The small RNA diversity from Medicago truncatularoots under biotic interactions evidences the environmental plasticity of the miRNAome
Authors (first, second and last of 17)
- Damien Formey
- Erika Sallet
- Martin Crespi
- Content type: Research
- Open Access
- Published: 24 September 2014
- Article: 457
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RRHP: a tag-based approach for 5-hydroxymethylcytosine mapping at single-site resolution
Authors (first, second and last of 5)
- Adam Petterson
- Tzu Hung Chung
- Xi-Yu Jia
- Content type: Method
- Open Access
- Published: 24 September 2014
- Article: 456
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Polygenic in vivovalidation of cancer mutations using transposons
Authors (first, second and last of 19)
- Su Kit Chew
- Dong Lu
- P Andrew Futreal
- Content type: Method
- Open Access
- Published: 27 September 2014
- Article: 455
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Cfp1 is required for gene expression-dependent H3K4 trimethylation and H3K9 acetylation in embryonic stem cells
Authors
- Thomas Clouaire
- Shaun Webb
- Adrian Bird
- Content type: Research
- Open Access
- Published: 04 September 2014
- Article: 451
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Accelerating precision biology and medicine with computational biology and bioinformatics
Authors (first, second and last of 4)
- Yves A Lussier
- Haiquan Li
- Qike Li
- Content type: Meeting report
- Open Access
- Published: 05 September 2014
- Article: 450
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The multitude of molecular analyses in cancer: the opening of Pandora’s box
Authors (first, second and last of 4)
- Hege G Russnes
- Per E Lønning
- Ole C Lingjærde
- Content type: Opinion
- Open Access
- Published: 03 September 2014
- Article: 447
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Checkpoints couple transcription network oscillator dynamics to cell-cycle progression
Authors (first, second and last of 6)
- Sara L Bristow
- Adam R Leman
- Steven B Haase
- Content type: Research
- Open Access
- Published: 05 September 2014
- Article: 446
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MicroRNA regulation of tumorigenesis, cancer progression and interpatient heterogeneity: towards clinical use
Authors
- S Patrick Nana-Sinkam
- Carlo M Croce
- Content type: Review
- Open Access
- Published: 31 August 2014
- Article: 445
This is part of 1 collection: -
Deletions of chromosomal regulatory boundaries are associated with congenital disease
Authors (first, second and last of 17)
- Jonas Ibn-Salem
- Sebastian Köhler
- Peter N Robinson
- Content type: Research
- Open Access
- Published: 04 September 2014
- Article: 423