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References
Buschena CA, Doudrick RL, Anderson NA (1992) Persistence of Laccaria spp as mycorrhizal symbionts of container-grown black spruce. Can J For Res 22:1883–1887
Dutta SK (1974) Repeated DNA sequences in fungi. Nucleic Acids Res 1:1411–1419
Erlich HA, Gelfand DH, Sninsky JJ (1991) Recent advances in the polymerase chain reaction. Science 252:1643–1651
Góes LB, Costa ABL, Freire LLC, Oliveira NT (2002) Randomly amplified polymorphic DNA of Trichoderma isolates and antagonism against Rhizoctonia solani. Braz Arch Biol Technol 45
Huai WX, Guo LD, He W (2003) Genetic diversity of an ectomycorrhizal fungus Tricholoma terreum in a Larix principis-rupprechtii stand assessed using random amplified polymorphic DNA. Mycorrhiza 13:265–270
Jacobson KM, Miller OK, Turner BJ (1993) Randomly amplified polymorphic DNA markers are superior to somatic incompatibility tests for discriminating genotype in natural populations of the ectomycorrhizal fungus Swillus granulatus. Proc Natl Acad Sci USA 90:9159–9163
Kaldorf M, Koch B, Rexer KH, Kost G, Varma A (2005) Patterns of interaction between Populus Esch5 and Piriformospora indica: a transition from mutualism to antagonism. Plant Biol 7:210–218
Malla R, Varma A (2004a) Phosphatase(s) from microorganisms. In: Varma A, Podila GK (eds) Biotechnological applications of microbes. IK International, New York, pp 125–150
Malla R, Prasad R, Giang PH, Pokharel U, Oelmueller R, Varma A (2004b) Characteristic features of symbiotic fungus Piriformospora indica. Endocytobiosis Cell Res 15:579–600
Malla R, Singh A, Md Z, Yadav V, Suniti, Verma A, Rai M, Varma A (2002) Piriformospora indica and plant growth promoting Rhizobacteria: an appraisal. In: Rao GP, Bhat DJ, Lakhanpal TN, Manoharichari C (eds) Frontiers of fungal diversity in India. pp 401–419
Mewes HW, Abbermann K, Bahr M, Frishman D, Gleissner A, Hani J, Heumann K, Kleine K, Maierl A, Oliver SG, Pfeiffer F, Zollner A (1997) Overview of the yeast genome. Nature. 387:7–65
Moller EM, Bahnweg G, Sandermann H, Geiger HH (1992) A simple and efficient protocol for isolation of high molecular weight DNA from filament fungi, fruit bodies and infected plant tissue. Nucleic Acids Res 20:6115–6116
Peskan T, Shahollari B, Pham HG, Hehl S, Markent C, Blank V, Kost G, Varma A, Oelmueller R (2004) Association of Piriformospora indica with Arabidopsis thaliana roots represent a novel system to study beneficial plant-microbe interactions and involve in early plant protein modifications in the endocytoplasmic reticulum and in the plasma membrane. Physiol Plant 122:465–471
Perotto S, Actis-Perino E, Perugini J, Bonfante P (1996) Molecular diversity of fungi from ericoid mycorrhizal roots. Mol Ecol 5:123–131
Pham GH, Kumari R, Singh A, Malla R, Prasad R, Sachdev M, Kaldorf M, Buscot B, Oelmüller R, Hampp R, Saxena AK, Rexer KH, Kost G, Varma A (2004) Axenic Cultures of Piriformospora indica. In: Varma A, Abbott L, Werner D, Hampp R (eds) Plant surface microbiology. Springer, Berlin Heidelberg New York, pp 593–613
Podila GK, Lanfranco L (2004) Functional genomic approaches for studies of mycorrhizal symbiosis. In: Varma A, Abbott L, Werner D, Hampp R (eds) Plant surface microbiology, Springer, Berlin Heidelberg New York, pp 567–592
Shahollari B, Varma A, Oelmueller R (2005) Expression of receptor kinase in roots is stimulated by the basidiomycete Piriformospora indica and the protein accumulates in Triton-X-100 insoluble plasma membrane microdomains. J Plant Physiol 162:945–958
Solaiman MZ, Abbott LK (2004) Functional diversity of arbuscular mycorrhizal fungi on root surface. In: Varma A, Abbott L, Werner D, Hampp R (eds) Plant surface microbiology, Springer, Berlin Heidelberg New York, pp 331–349
Taylor JW (1986) Fungal evolutionary biology and mitochondrial DNA. Exp Mycol 10:259–269
Varma A, Abbott LK, Werner D, Hampp R (2004) The state of art. Plant surface microbiology. In: Varma A, Abbott L, Werner D, Hampp R (eds) Plant surface microbiology. Springer, Berlin Heidelberg New York, pp 1–11
Verma S, Varma A, Rexer KH, Hassel A, Kost G, Sarabhoy A, Bisen P, Bütenhorn B, Franken P (1998) Piriformospora indica, gen. et sp. nov., a new root colonizing fungus. Mycologia 90:896–903
Welsh J, McClelland M (1990) Fingerprinting genomes using PCR with arbitrary primers. Nucleic Acids Res 18:7213–7218
Williams JGK, Kubelik AR, Livak KJ, Rafalski JA, Tingey SV (1990) DNA polymorphism amplified by arbitrary primers are useful as genetic markers. Nucleic Acids Res 18:6531–6535
Weiß M, Selosse MA, Rexer KH, Urban A, Oberwinkler F (2004) Sebacinales: a hitherto overlooked cosm of heterobasidiomycetes with a broad mycorrhizal potential. Mycol Res 108:1–8
Zinno TD, Longree H, Maraite H (1998) Deversity of Pyrenophora tritici-repentis isolates from warm wheat growing areas: pathogenicity, toxin production and RAPD analysis. In: Duveiller E, Dubbin HJ, Reeves J, McNab A (eds) Helminthosporium blights of wheat, spot blotch and tan spot. CIMMYT, Mexico, pp 302–311
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Malla, R., Varma, A. (2007). Use of Short Oligonucleotide Primers in Random Amplified Polymorphic DNA Techniques for Species Identification. In: Varma, A., Oelmüller, R. (eds) Advanced Techniques in Soil Microbiology. Soil Biology, vol 11. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-540-70865-0_15
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