Abstract
Noise is considered an artefact, in the practical use it is overcome by cool down the system in general at 77 K. We consider three biological examples which overcome noise by filtering the ratio between the signals and noise by using a distribution system. Noise is considered here in statistical terms poison, where the incident photon or otherwise in a detector and the detector has not influence and cannot increase.
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1 Introduction
Noise, as defined by Frieden [1], assumes that \( x_{\text{m}} \) is an event (for example a photon) where \( P\left( {y_{\text{m}} |x_{\text{n}} } \right) = P\left( {y_{\text{m}} } \right) \), and \( P \) is the probability, \( y_{\text{m}} \) is the event passing through a filter or communication filters, by the law of largest numbers (i.e. the sample size gets closer to the average size of the whole sample).
Dereniak et al. [2] described noise using the analogy of a set of automobiles exiting a highway, and to be able to be detected, the automobiles need to exit at same speed and distance since the photons event are random, the only option of detecting them is by slowing them down by cooling systems (77 K).
While noise as found in near infrared is described by Holst [3], many factors affect the transmittance; factors like airborne particle affect the transmittance of any signal, this is much less in far infrared (Terahertz). For this reason, many applications like medical ones consider far infrared scanning systems. Other types of noise, found biological systems include magnetic field noise, which is produced by thermal motion of electrons (Johnson Current Noise) [4].
Nature gives us several examples of how noise overcome [5]. Biological systems evolve in the direction of minimizing cost and saving resources [6]. We are considering three natural examples that may solve the problem of noise in near infrared systems: Phyton, Middle Infrared: Melanophila acuminata Beetle and Magnetic Fields of Magnetospillium magnetotactum.
2 Methods
2.1 Snakes
Pytone were obtained with help Pittsburgh Herpetology Society and through privates’ breeders. The snakes where kept in room temperature, under strict ethical conditions, and fed once every week [7,8,9].
2.2 Histology
Frozen sections of Pythonomie and Boniae sensor were cut 5.00 μm mounted on slides and stained with Azure methylene blue eosin dissolved in phosphate buffer solution which gives a nuclear purple colour [10,11,12,13].
2.3 Melanophila Acuminata
Melanophila acuminata were provided by Richard Westcott and Nathan Schiff. They had been collected from two locations: the Sandy River delta in Multnomah Co., Oregon and Olallie Lake in Jefferson Co., Oregon, in the Cascade Range at 1615 m elevation. The beetles were kept at 25 °C in a humidified environment and were fed raisins, peanuts and water.
2.4 Histology
Frozen sections of beetle sensory pit organs were cut at 5–10 μm thickness, mounted and stained with fuchsin Schiff, naphtol yellow and Sudan black [14] for differential staining of lipids [15,16,17,18], proteins [19] and polysaccharides.
Magnetospirillum gryphiswaldense was grown micro aerobically in flask standard medium [20] for 24 h at 25 °C as described earlier [21]. Cells were harvested by centrifugation (10,500 × g, 20 min, 4 °C) and washed twice with ice cold wash buffer (20 mM Hepes pH 7.4, 5 mM EDTA). Cell pellets were stored at −80 °C until use. Magnetosome isolation and purification with minor modifications was performed according to the protocol of Uebe et al. [22].
2.5 Scanning Electron Microscopy (SEM)
The SEM micrographs were taken with an electron microscope Phillips XL 30 FEG SEM. The electron microscopy samples were treated with ethanol to remove lipid in the cuticular region.
2.6 Zinc Phosphide
Single needles of zinc phosphide (Zn3P2) were grown by physical vapour transport [23] in a two zone furnace. Powder Zn3P2 (Sigma Aldrich) was used as the source material for needle growth. The material was [24] sealed under vacuum (<1 Pa) in quartz ampoules in which the growth took place, and were carbon coated by cracking of methane at 1000 °C in order to avoid chemical reaction between the Zn3P2 and the silica and prevent oxidation [25].
3 Results
Phyton has been described earlier in a morphological study by Weyand et al. [26]. The snake does not have a specific specialize sensor [9, 27,28,29,30,31,32,33], but Fig. 1 shows the system is just open ended nerves.
In the case of M. acuminata specialized sensor are present [34]. Figure 2 shows the sensor and Fig. 3 shows the sensor after special staining.
In the case of magnetosomes many examples can be considered; Fig. 4 shows the magnetosomes in Magnetospirillum magnetotacticum with flagellae used in orientation from a higher gradient to a lower oxygen concentration within magnetic fields [35].
4 Discussion
Each of the biological examples have designed sensor systems that are adapted to reduction of noise, in some case more specialize than other just using what is available to achieved a functionality. In the case of Pythons, the IR detection mechanism is not made of photoreceptors—while photoreceptors detect light via photochemical reactions, the protein in the pits of snakes is a heat-sensitive ion channel (actually a temperature sensitive ion channel). It senses near-infrared signals through a mechanism involving warming of the pit organ, rather than chemical reaction to light [36]. M. acuminata has specialize sensors and the mechanism is photoreceptor-based [37], whereas in the case magnetosomes the system is based on magnetic field gradient [38].
The two options are possible to study Biomimetics strategies to overcoming noise: The first option utilizes the insertion of clamps for measuring signals originated from the activated sensor, and it is found in the biological process [7, 39]. The second option is to simulate the sensor using hybrid neural net structure, which involves two processing levels. The first level is for Signal/Noise ratio optimization done by so called DLS spectra and the second a biologically inspired visual signal processing unit (basic module) which models optical and acoustical pattern recognition in ear and eye; by a three-neuron-structure with INEX-synapses (Binary inhibitor model) as shown in Fig. 5. This basic module structure—which solves also the XOR-problem—is a high sensitive edge detector enabling the accentuation of even minimal contrasts in visual scenes [40,41,42,43,44,45].
This model works well with any level of signal input and when M. acuminata sensor is simulated it is shown to take an average of the signal, filter the noise since the sensor is continuously taken samples filtering the signal, which is possible to obtain information, a system to simulated based on specific process for example using Zinc phosphide [24, 46, 47] micro-wires [25, 48, 49], such system can be possible Fig. 6 show a single microwire and Fig. 7 shows the setup microchip setup (Fig. 8 shows the reader), with the signal reader and the same concept can be applied to magentosomes as show elsewhere [50, 51].
5 Conclusion
Distinct biological systems use the same principals to overcome noise by multiple distributed systems [52, 53], whether it is due thermal or photons, by having multiple sensors as a solution; this arrangement can average the ratio between the signal and noise. Noise as mention when the sample is sizes of the whole signal ratio crated the noise by continually picking the sample refined the signal in each case to achieve an objective, snake for pray, M. acumainata can detect fires from 150 km, using the burn wood, which is actually soft to deposited eggs, then larvae have protection and food. Bacteria case is anaerobic, moving from higher concentrations of oxygen versus lower concentration since the iron oxidises and sulphide iron oxide is found in this regions. The biological systems show a solution for far infrared, terahertz and magnetic detectors.
References
Frieden, B.R.: Probability, Statistical Optics and Data Testing. Springer, New York, NY (1991)
Dereniak, D.L., Boreman, G.D.: Infrared Detectors and Systems. John Wiley & Sons, New York (1996)
Holtst, G.S.: Common Sense Approach to Thermal Imaging. SPIE Optical Engineering Press, Winter Park, Florida US (2000)
Lee, S.K., Romalis, M.V.: Calculation of magnetic field noise from high permeability magnetic shields and conducting objects with a simple geometry. J. Appl. Phys. 103, 084904 (2008)
Wolken, J.J.: Light Detectors, Photoreceptors and Imaging System in Nature. Oxford University Press, New York Oxford (1995)
Niven, J.E., Scharleman, J.P.W.: Do insects metabolic rates at rest and during flight scale with body mass? Biol. Lett. 1, 346–349 (2005)
Waterman, T.H.: Animal Navigation. Scientific America Library, W. H. Freeman & Co., New York
Banks, R.C., McDiarmid, R.W., Gardner, A.L.: Checklist of Vertebrates of the United States, the U.S. Territories, and Canada, no. 166. Federal Government Series: Resource Publication (1987)
Bullok, T.H., Cowles, R.B.: Physiology of an infrared receptor: the facial pit of pit vipers. Science 115, 541–543
Chailapakula, O., Wonsawat, W., Siangprohb, W., Grudpan, K., Zhaod, Y., Zhud, Z.: Analysis of sudan I, sudan II, sudan III, and sudan IV in food by HPLC with electrochemical detection: comparison of glassy carbon electrode with carbon nanotube-ionic liquid gel modified electrode. Food Chem. 109, 876–882 (2008)
Lillie, R.D.: Conn’s Biological Stains. Williams & Wilkins, Baltimore, MD., U.S.A
Baker, J.R.: Principles of Biological Microtechnique. Methuen, London (1970)
Lansink, A.G.W.: Thin layer chrornatography and histochemistry of Sudan Black B. Histochemie 16, 68–84 (1968)
Himes, M., Moriber, L.: A triple stain for deoxyribonucleic acid, polysaccharides and proteins. Stain Technol. 31, 67–70 (1956)
Patterson, C.M., Kruger, B.J., Dalez, T.J.: Lipid and protein histochemitry of enamel of fluoride-effects of fluoride. Calcif. Tissue Int. 24, 119–125 (1977)
Vogel, M.: Observations on the structure of Cystierci of Taenia solium and Taenia saginata (Cestoda: Taeniidae). J. Parasitol. 49, 86–90 (1963)
Ornstein, L., Hudson, A.: Spectral matching of classical cytochemistry to automated cytology. J. Histochem. Cytochem. 22, 453–469 (1974)
Lûsis, O.: The histology and histochemistry of development and resorption in the terminal oocytes of desert locust, Schistocerca gregaria. Quar J Micro Sci. 104, 57–68 (1963)
Briand, L., Nespoulos, C., Huet, J.C., Takahashi, T., Pernollet, J.C.: Lingand binding and physico-chemical properties ASP2, a recombination odorant-biding protein from honeybee. E. J. Biochem. 268, 752–760 (2001)
Uebe, R., Voigt, B., Schweder, T., Albrecht, D., Katzmann, E., Lang, L., Böttger, L., Matzanke, B., Schüler, D.: Deletion of a fur-Like gene affects iron Homeostasis and Magnetosome formation in Magnetospirillum Gryphiswaldense. J. Bacteriol. 192, 4192–4204 (2010)
Schüller, D.: Formation of Magnetosomes in Magnectotactic bacteria. J. Mol. Microbiol. Biotechnol. 1, 79–86 (1999)
Uebe, R., Henn, V., Schüler, D.: The MagA protein of Magnetospirilla is not involved in bacterial magnetite biomineralization. Bacteriol. 194, 1018–1023 (2012)
Muñoz, V., Decroix, D., Chevy, A., Besson, J.M.: Optical properties of zinc phosphide. J. Appl. Phys. 60, 3282–3288 (1986)
Decroix, D., Munoz, V., Chevy, A.: Growth and electrical properties of Zn3P2 single crystals and polycrystalline ingonts. J. Mater. Sci. 22, 1265–1270 (1987)
Israelowitz, M., Weyand, B., Leiterer, C., Munoz, V., Martinez-Tomas, C., Herraiz-Llacer, M., Slowik, I., Beleites, C., Fritzsche, W., Krafft, C., Henkel, T., M Reuter, Rizvi, S., Gille, C., Reimers, K., Vogt, P., von Schroeder, H.P.: Biomimetic-inspired infrared sensors from Zn3P2 microwires: study of their photoconductivity and infrared spectrum properties. New J. Sci. (2014)
Weyand, B., Israelowitz, M., Reuter, M., Bohlmann, S., Rizvi, S.W., Gille, C., Vogt, P., von Schroeder, H.P.: Morphological study of the near-infrared pit sensor of the Python. In: Biomimetics, Bionic Applications, with Clinical Applications. Springer International Publishing Switzerland (2015)
Klein, M.C.G., Gorb, S.N.: Epidermis architecture and material properties of the skin of four snake species. R. Soc. Publ. (2012)
Krochmal, A.R., Bakken, G.S., LaDuc, T.J.: Heat in evolution’s kitchen: evolutionary perspectives on the functions and origin of the facial pit of pitvipers (Viperidae: Crotalinae). J. Exp. Biol. 207, 4231–4238 (2004)
Bullock, T.H.: Radiant heat reception in snakes. Commun. Behav. Biol. A 1, 10–29 (1968)
Chiasson, R.B., Bentley, D.L., Lowe, C.H.: Scale morphology in Agkistrodon and closely related Crotaline Genera. Herpetologica. 45, 430–438
Von Düring, M., Miller, M.R.: Sensory nerve endings of the skin and deeper structures. Academic Press, London (1979)
Bullock, T.H., Fox, W.: The anatomy of the infra-red sense organ in the facial pit of pit vipers. Q. J. Microsc. Sci. 98, 219–223 (1957)
Newman, E.A., Gruberd, E.R., Hartline, P.H.: The infrared trigemino-tectal pathway in the rattlesnake and in the python. J. Comp. Neurol. 191
Israelowitz, M., Rizvi, S.W., von Schroeder, H.P.: Fluorescence of the “fire-chaser” beetle Melanophila acuminata. J. Lumin. 126, 149–154 (2007)
Pfeiffer, H.: Determination of anisotropy field distribution in particle assemblies taking into account thermal fluctuations. Phys. Sataus Solidi A. 118, 295–306 (1990)
Gracheva, E.A., Nicholas, I.T., Ingolia, N., Kelly, Y.M., Cordero-Morales, J.M., Hollopeter, G., Chesler, A.T., Sánchez, E.E., Perez, J.C., J S Weissman, Davis, J.D.: Molecular basis of infrared detection by snakes. Nature 464, 1006–1011 (2010)
Israelowitz, M., Kwon, K.A., Rizvi, S.W., Gille, C., von Schroeder, H.P.: Mechanism of infrared detection and transduction by Beetle Melanophila Acuminata in memory of Jerry Wolken. J. Bionic Eng. 8, 129–139 (2011)
Strauss, S., Israelowitz, M., Weyand, B., Müller, R., Henkel, T., Shüler, D., Uebe, R., Rizvi, S., Gille, C., von Schroeder, H.P., Reimers, K.: Ferro oxyize magnetic-torsional angle from Magnetospirillum gryphiswaldense. In: Biomimetics, Bionic Applications, with Clinical applications. Springer International Publishing Switzerland (2015)
Evans, G.: Infrared receptors in Melanophila acuminata De Geer. Nature 202, 211 (1964)
Reuter, M., Bohlmann, S.: Automatic detection of buried utilities in georeferenced multi-sensor data with neural networks. Presented at the TOK, Izmir, Turkey August (2011)
Reuter, M.: Computing with Activities V. experimental proof of the stability of closed self organizing Maps (gSOMs) and the potential formulation of neural nets. Presented at the WAC 2008, Waikoloa, Hawaii, USA (2008)
Reuter, M., Lenkl, K., Schroeder, O., Gramowski, A., Jügelt, K., Priwitzer, B.: Information extraction from biphasic concentration-response curves for data obtained from neuronal activity of networks cultivated on multielectrode-array-neurochips. Presented at the BMC Neuroscience January (2010)
Reuter, M.: Of the Stability of Closed Self Organising Maps (gSOMs) for Predictive Control. Presented at the, Lyon, France (2008)
Reuter, M.: Supervising cathodic protected gas nets with CI-based methods. Presented at the ISC’2013, 11th Annual Industrial Simulation Conference, Ghent, Belgium, 22 May 2013
Reuter, M., Bohlmann, S.: Supervising MultiCut Aggregates by Special Neural Nets. Presented at the WAC 2012, Puerto Vallarta, Mexico (2012)
Riedmiller, M., Braum, H.: A direct Adaptive Method for Faster Backpropagation Learning: The RPROP Algorithm, Neural Networks. Presented at the IEEE International Conference (1993)
Munoz, V., Decroix, D., Chevy, A., Besson, J.M.: Optical properties of zinc phosphide. Appl. Phys. 69, 3282–3288 (1986)
Israelowitz, M., Rizvi, S.W., Holm, C., Gille, C., von Schroeder, H.P.: Method for producing a microchip that is able to detect infrared light with a semiconductor at room temperature
Israelowitz, M., Rizvi, S.W., Holm, C., Gille, C., von Schroeder, H.P.: Method to detect poor infrared rays, microchip that is able to detect poor infrared rays and apparatus working with these microchips
Israelowitz, M., Rizvi, S.W., Gille, C., Holm, C., von Schroeder, H.P.: Method for detection of poor sources of electrical and magnetic fields
Israelowitz, M., Rizvi, S.W., Gille, C., Holm, C., von Schroeder, H.P.: Microchip for the detection of poor sources of electrical and magnetic fields
Titterington, D.M.: Bayesian methods for neural networks and related models. Stat. Sci. 19, 128–129 (2004)
Kaski, S.: Data exploration using self-organizing maps. Acta Polythecnica Scand. Math. Comput. Manag. Publ. Finn. Acad. Technol. 57–60 (1997)
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Rizvi, S.W.H. et al. (2021). Biomimetics Strategies to Overcoming Noise. In: Israelowitz, M., Weyand, B., von Schroeder, H., Vogt, P., Reuter, M., Reimers, K. (eds) Biomimetics and Bionic Applications with Clinical Applications. Series in BioEngineering. Springer, Cham. https://doi.org/10.1007/978-3-319-53214-1_10
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