Introduction

The order Pholidota, including the eight living species of pangolins or scaly anteaters (Feiler 1998; Nowak 1999; Gaubert and Antunes 2005; Schlitter 2005), is one of the smallest of the extant placental mammal orders. Moreover, its modern representatives are restricted to the Old World tropics (Corbet and Hill 1991; Nowak 1999; Schlitter 2005), and the fossil record of the group is meager, likely due to the fact that these animals are toothless, may never have been speciose, and typically exist in low population densities, preferring forested environments with low preservation potential (Patterson 1978; Gaudin 1999b; Gaudin et al. 2006). Consequently, it is not surprising that the group remains poorly studied relative to other more diverse, abundant, and widespread placental orders, and therefore many aspects of its systematics, and biogeographic and evolutionary history are incompletely understood. Despite the low taxonomic diversity of Pholidota, its members display a large number of unusual anatomical and behavioral adaptations that are of interest to students of mammalian biodiversity and evolution—for example, their covering of external, overlapping epidermal scales and their highly modified feeding apparatus specialized for consuming ants and termites (Grassé 1955; Kingdon 1974, 1997; Nowak 1999). The small size of Pholidota renders it amenable to very detailed systematic study, making it practical to examine representative specimens of all extinct and extant species.

The species and generic-level taxonomy of extant pangolins has been a matter of unresolved controversy for nearly a century. As discussed in Gaudin and Wible (1999), the species from the Indian subcontinent and the species from southern China were assigned different specific epithets by different authors for much of the 20th century, although recent taxonomic treatments have appeared to settle on the name Manis crassicaudata for the former and Manis pentadactyla for the latter (Heath 1992a, 1995; Gaudin and Wible 1999; Nowak 1999; Schlitter 2005). The species from the East Indies also has been divided recently into two distinct species, Manis javanica for those animals that occupy the bulk of the formerly designated geographic range and Manis culionensis for a recognizably distinct former subspecies from the Palawan and Culion Islands in the western Philippines (Feiler 1998; Gaubert and Antunes 2005).

Through longstanding consensus the eight extant species are allocated to the single family Manidae. However, these species have been placed in as many as six genera (Pocock 1924), as few as a single genus (Manis; most recently by Nowak 1999; Schlitter 2005), with other authors suggesting: two genera, Manis for Asian pangolins and Phataginus for African pangolins (Patterson 1978; Corbet and Hill 1991); three genera, an Asian Manis, Phataginus for African tree pangolins, and Smutsia for African ground pangolins (Koenigswald 1999); or four genera, Manis, Smutsia, with the African tree pangolins placed in separate genera, Phataginus and Uromanis (McKenna and Bell 1997). Although the single genus arrangement is followed in recent Mammalogy textbooks (e.g., Vaughan et al. 2000; Martin et al. 2001; Feldhamer et al. 2007) and numerous recent publications on pangolins (e.g., Heath 1992b; Chan 1995; Swart et al. 1999; Gaubert and Antunes 2005; Gaudin et al. 2006; Botha and Gaudin 2007), both Emry (1970) and Gaudin and Wible (1999) expressed discomfort with the monogeneric arrangement, because it underrepresented the morphological diversity present among the extant taxa. Nevertheless, Emry (1970) and Gaudin and Wible (1999) declined to suggest formal alternatives absent a more thorough taxonomic study of the issue. Indeed, Gaudin and Wible (1999) declined to do so despite the fact that their cladistic phylogenetic analysis of extant pangolins supported a three genus arrangement like that of Koenigswald (1999) described above. However, Gaudin and Wible’s (1999) analysis was based on a rather restricted character base, considering only morphological characters drawn from the cranial skeleton. Their study provided strong support for the monophyly of the African tree pangolins and Asian pangolins, but the monophyly of the African ground pangolins collapsed with the addition of a single step to the most parsimonious tree, and the interrelationships among the three examined Asian species varied, depending on the character weighting and ordering schemes employed. As stated by Gaudin and Wible (1999), a more comprehensive analysis of the extant taxa, involving a broader base of morphological characters, would go far in resolving these taxonomic uncertainties.

As noted above, the fossil record of pangolins is relatively depauperate (Patterson 1978; Gaudin 1999b; Rose et al. 2005; Gaudin et al. 2006). There are, however, a number of well-known fossil taxa from Cenozoic deposits that are represented by reasonably complete skeletal material. They include: the genus Eomanis, the oldest pangolin, including two species (E. waldi and E. krebsi) from the middle Eocene Messel fauna of Germany (Storch 1978; Storch and Martin 1994; Horovitz et al. 2005); Cryptomanis gobiensis, a newly described genus and species from the late Eocene of the Inner Mongolia region of northern China (Gaudin et al. 2006); Patriomanis americana, the only pangolin known from the Western Hemisphere, deriving from the latest Eocene (Chadronian LMA) of western North America (Emry 1970, 1973, 2004); and Necromanis, a genus including several species of Oligocene-Miocene age from central Europe (Koenigswald 1969, 1999; Koenigswald and Martin 1990). There are more recent Plio-Pleistocene pangolin records from Europe, Africa, and southern Asia (Guth 1958; Emry 1970; Botha and Gaudin 2007). These are primarily based on fragmentary skeletons or isolated elements, with the exception of the nearly complete skeleton of the giant pangolin Manis palaeojavanica from the Pleistocene of Java (Dubois 1907, 1926; Hooijer 1947) and a partial skeleton of “Manisgigantea from the Pliocene of South Africa (Botha and Gaudin 2007).

Gaudin and Wible (1999) noted that in previous treatments, fossil pangolins were typically allocated to the same family as the extant forms, the Manidae. Although these extinct taxa were recognized as being anatomically more primitive than the living taxa in various respects, neither their detailed relationships to modern pangolins nor the interrelationships among the fossil taxa themselves were formally addressed. In more recent literature (e.g., Szalay and Schrenk 1998; Storch 2003; Rose et al. 2005; Gaudin et al. 2006), the morphological diversity among extant and extinct pangolins was deemed sufficient to merit the recognition of additional families.

Gaudin and Wible (1999) tentatively suggested that several families may need to be recognized for extinct pangolins, although their study included only one extinct taxon, Patriomanis. Their study was restricted to characters of the skull and lower jaw, and Patriomanis was the only fossil pangolin represented by a significant amount of described and undescribed cranial material (Emry 1970, 2004). Gaudin and Wible’s (1999) analysis was the first to explicitly support the monophyly of the extant pangolins exclusive of their extinct relatives. Modern pangolins were diagnosed by at least six unambiguous cranial synapomorphies not found in Patriomanis, and this node was one of the strongest in the study. These results strongly contradicted the taxonomic arrangement of McKenna and Bell (1997), who, without any explicit character support, linked the extinct Tertiary pangolin genera Patriomanis, Necromanis, and Eomanis to the extant Asian pangolins in a subfamily Maninae to the exclusion of the extant African pangolins, which were placed in a separate subfamily Smutsiinae.

Szalay and Schrenk (1998) erected a separate family Patriomanidae for Patriomanis, Necromanis, and Eomanis. However, Storch (2003) asserted that the oldest of these taxa, Eomanis, was distinctive, exhibiting a mix of plesiomorphic features and resemblances to the extinct group Palaeanodonta (see “Discussion” below) not found in other pangolins, and hence he designated a separate family Eomanidae to accommodate this genus. Storch (2003: 56) also claimed, based on “extremely rich and complete new material of Necromanis” that “there is no justification for retaining Necromanis and Patriomanis together in the family Patriomanidae.” Gaudin et al. (2006) contended that the Patriomanidae as defined by Szalay and Schrenk (1998) was paraphyletic, with Eomanis more primitive and Necromanis more derived than Patriomanis, largely in agreement with Storch (2003). However, Gaudin et al. (2006) also advocated the retention of Patriomanidae as a valid taxon if restricted to Patriomanis and their newly described genus Cryptomanis. Resolution of these family level taxonomic issues will require a detailed phylogenetic investigation that includes all these Tertiary fossil pangolin genera along with the extant species, such as that undertaken in the present study.

One final taxonomic concern involves the content of the order Pholidota. Traditionally, the group was restricted to extant pangolins and various extinct Tertiary forms that were clearly closely related (Simpson 1945). However, Emry (1970) suggested that Pholidota should also include Palaeanodonta as a suborder, an arrangement followed by McKenna and Bell (1997), although the latter considered Pholidota itself to be a suborder of a larger group, the order Cimolesta. Palaeanodonts are an uncommon, extinct group of specialized fossorial mammals with reduced dentitions that derive from lower Cenozoic deposits mainly in North America, although representatives are also known from Europe and Asia (Gaudin 1999a; Rose et al. 2005). In one of the first major treatments of palaeanodonts, Matthew (1918) hypothesized they were related to either Pholidota or the order Xenarthra. Simpson (1945) allied palaeanodonts only with xenarthrans, but the group’s affinities have since been controversial (Rose et al. 2005). Although palaeanodonts share a number of derived cranial (Gaudin 2004) and particularly basicranial similarities (Patterson et al. 1992; Gaudin 1995) with Xenarthra, recent evidence documenting a variety of close resemblances to Eomanis suggests that palaeanodonts are probably more closely related to pangolins (Storch 2003; Rose et al. 2005). This relationship has yet to be confirmed by a comprehensive phylogenetic study of “edentate” relationships that examines an extensive set of representatives from Xenarthra, Palaeanodonta, pangolins, as well as a variety of other putatively related fossil taxa (e.g., Eurotamandua, Ernanodon). If confirmed, however, the relationship between palaeanodonts and pangolins would create certain nomenclatural problems. If palaeanodonts are included in Pholidota proper, following Emry (1970) and McKenna and Bell (1997), then there is no widely accepted name for the clade including living and extinct pangolins. Rose et al. (2005) and Gaudin et al. (2006) called the group of living and extinct pangolins “Pholidota sensu stricto,” but this seems awkward as a permanent usage. Alternatively, the term Pholidota could be restricted to this pangolin clade, but that would leave the clade including pangolins and palaeanodonts unnamed.

In addition to the phylogenetic and taxonomic concerns discussed above, the biogeographic history of pangolins in not well understood (Gaudin et al. 2006). A long-standing hypothesis based on morphological studies of placental phylogeny (e.g., Novacek and Wyss 1986) is that Pholidota and Xenarthra are sister taxa. This would be consistent with a Gondwanan origin for Pholidota, more specifically an origin as an “Old African” order along with proboscideans, hyracoideans, and others. There is in fact a Paleogene record of Pholidota from Africa, a pair of isolated ungual phalanges from the early Oligocene of Egypt (Gebo and Rasmussen 1985). An African origin would also be consistent with the group’s extant distribution. However, the oldest undisputed pangolins in the genus Eomanis come from central Europe, and all the well-known, well-preserved early Cenozoic fossil material, including Cryptomanis, Patriomanis, and Necromanis, obtains from Laurasian continents. This suggests a Laurasian origin for the group (Gaudin et al. 2006), and perhaps even more specifically, a European origin (Storch 2003). A northern origin would be consistent with recent molecular-based analyses of placental phylogeny (e.g., Springer et al. 2004) that place Pholidota within the Laurasian clade Laurasiatheria as sister to Carnivora. If the Laurasian palaeanodonts were confirmed as close relatives of Pholidota, this would further support a biogeographic genesis on the northern continents.

The biogeographic source for modern pangolins is also unclear. All the Paleogene pangolins occur in areas outside the biogeographic range of modern pangolins (Gaudin et al. 2006), which extends through sub-Saharan Africa, the Indian subcontinent, southeast Asia and the East Indies (Corbet and Hill 1991; Kingdon 1997; Nowak 1999; Schlitter 2005). Even the Asian Cryptomanis (Gaudin et al. 2006) and the Oligocene pangolin record from Egypt (Gebo and Rasmussen 1985) lie well to the north of the extant range. Pangolins do not appear in their modern range until the Pliocene and Pleistocene. The sub-Saharan African records are slightly older than the Asian records (Guth 1958; Emry 1970; Botha and Gaudin 2007), and the phylogeny of Gaudin and Wible (1999) arranged the extant African species in a paraphyletic stem group below the monophyletic clade of Asian species. Both of these would suggest an African origin for modern pangolins, with subsequent dispersal into southern Asia. However, given the persistent phylogenetic uncertainty surrounding the relationships among the extant species and among the extant and extinct taxa, an Asian origin remains a plausible alternative. It is even possible that the origin of the modern forms lies neither in Africa nor Asia, but in Europe, with subsequent dispersal to Africa and Asia. There is a fragmentary Pliocene record of pangolins from eastern Europe (Kormos 1934). Moreover, records of the European genus Necromanis extend to the early Neogene. If this taxon could be shown to be a close relative of modern pangolins, a European origin for the modern forms would be further supported.

The goal of the present study is to conduct a comprehensive phylogenetic analysis of the order Pholidota, in order to improve understanding of the systematics and the biogeographic and evolutionary history of the group. Unlike the previous cladistic morphology-based study by Gaudin and Wible (1999), the present study incorporates a broader array of extinct taxa and a large number of characters drawn from the entire postcranial skeleton, in addition to cranial skeletal characters. The original intent of the project was to examine all extant and extinct pangolin taxa. The present study includes all extant pangolin species except Manis culionensis, which was not widely recognized as a distinct species at the time this study was being conducted (Gaubert and Antunes 2005), and is in any case quite similar in most aspects of its morphology to Manis javanica and would likely group as a sister taxon to this species. The present study also includes all well-known fossil pangolins (i.e., those known from more than isolated elements) except the giant Pleistocene Manis palaeojavanica (Dubois 1907, 1926; Hooijer 1947), which was not examined due to time and funding constraints, and the Pliocene remains of “Manisgigantea described by one of us (Botha and Gaudin 2007) but unavailable at the time of the study. In addition, the enigmatic taxon Eurotamandua joresi, from the middle Eocene Messel deposits of Germany (Storch 1981), is included in order to evaluate its potential relationships to pangolins—there is substantial disagreement regarding its affinities, but at least some authors have suggested it might be allied with palaeanodonts or pangolins (Rose et al. 2005). Lastly, two of the best known and skeletally least derived palaeanodont genera, Palaeanodon and Metacheiromys, are included in the analysis.

Materials and methods

This project originated during a period of sabbatical study by one of us (TJG) in the Department of Paleobiology at the National Museum of Natural History, Smithsonian Institution, Washington, D.C. during the months of January–April 2002. At this time, a detailed, bone-by-bone comparison was made of the entire skeleton for seven of the eight currently recognized extant species of pangolin, as well as Patriomanis americana and Cryptomanis gobiensis. A total of 395 discrete skeletal characters were eventually obtained. The characters are described in Appendix 2, and include the 67 cranial skeletal characters used in the previous study of Gaudin and Wible (1999) (see Appendix 2: chars. 306–372). The characters were scored via direct observations of the specimens listed in Appendix 1. In the palaeanodonts Palaeanodon and Metacheiromys, these observations were supplemented by descriptions in the literature (Matthew 1918; Simpson 1931; Schoch 1984; Patterson et al. 1992; Szalay and Schrenk 1998; Gaudin and Wible 1999; Rose and Lucas 2000; Gaudin 2004; Wible and Gaudin 2004). Additional information used in scoring Eurotamandua joresi and Eomanis waldi was graciously provided by Dr. Gerhard Storch of the Senckenberg Museum in Frankfurt, Germany, based on his unpublished three-dimensional x-ray studies of these taxa. Dr. Storch also provided access to new, undescribed material of Necromanis to aid in the scoring of this taxon.

Of the 17 taxa listed in Appendix 1, 15 are ingroup taxa, including seven of the eight currently recognized extant pangolin species, five fossil pangolins, the “edentate” Eurotamandua joresi, and two metacheiromyid palaeanodont genera, Palaeanodon and Metacheiromys. The data matrix of 395 characters and 17 taxa (Appendix 3) was analyzed using the computer program PAUP [Version 4.0b10 (Swofford 2002)]. This data matrix has been deposited in MorphoBank and can be obtained at http://www.morphobank.org. Analyses of the entire matrix were conducted using PAUP’s branch and bound algorithm in order to ensure that a globally parsimonious solution would be obtained. Characters were optimized using PAUP’s DELTRAN option in all analyses [see Gaudin (1995) for full justification—essentially this option is believed to be more conservative in that it only assigns synapomorphies to a clade if there is unambiguous evidence that the character evolves at the base of the clade], and all character state changes were weighted equally. In those instances in which intraspecific variation was noted for a given character in a given taxon, the taxon was coded for all relevant states and treated as polymorphic in the PAUP analyses. Of the 395 characters, 163 were multistate, and 87 of these were ordered along numerical, positional, or structural morphoclines (Appendix 2). Several characters proved to be parsimony uninformative in the final analyses, but all values reported for consistency index exclude uninformative characters.

Characters were polarized via comparison to two successive outgroups (following Maddison et al. 1984; Appendix 1). Most recent molecular phylogenetic analyses of supraordinal relationship among placental mammals have converged on the idea that modern pangolins are members of the supraordinal cluster Laurasiatheria, and more specifically, represent the sister taxon to the order Carnivora (Springer et al. 2004, 2005). Following the results of these studies, the basal feliform carnivoran Nandinia binotata (Flynn and Wesley-Hunt 2005) was employed as the most proximate outgroup to the pangolins and their putative relatives. The second outgroup was the skeletally rather generalized placental mammal Erinaceus sp., a member of the Eulipotyphla, a group that in turns occupies a basal position within Laurasiatheria in recent molecular phylogenies of placentals (Springer et al. 2004, 2005).

Robusticity of results was assessed using several different methods. The relative support for various groupings was assessed using a bootstrap analysis (Hillis and Bull 1993) and by determining branch support, i.e., the number of additional steps required to collapse each node (Bremer 1994). The bootstrap analysis employed PAUP’s branch and bound algorithm, with 1000 bootstrap replicates. Other PAUP settings were identical to those described in the preceding paragraphs. Branch support was calculated by instructing PAUP to save trees progressively longer than the MPT, in increments of one step. At each incremental step, a strict consensus tree was generated. The PAUP settings were otherwise identical to those described in preceding paragraphs.

Because of the large amount of missing data for the fossil taxa, additional analyses were performed using only extant taxa, including seven living pangolin species and the two aforementioned outgroup taxa. In all other respects, these analyses were identical to those described above for the full data matrix. Bootstrap and Bremer support for this tree were calculated as described above. Results of this second set of analyses are compared to those using the entire data matrix below.

Finally, the results of the present study were compared to the previous phylogenetic hypotheses of Gaudin and Wible (1999). PAUP was constrained to produce the shortest tree(s) consistent with Gaudin and Wible’s (1999) published cladogram. The results are compared below to the MPT resulting from the present study.

Institutional Abbreviations

AMNH, American Museum of Natural History, New York, NY; CM, Carnegie Museum of Natural History, Pittsburgh, PA; FMNH, Field Museum of Natural History, Chicago, IL; GMH, Geiseltalmuseum, Martin-Luther-Universität, Halle-Wittenberg, Germany; HLMD, Hessisches Landesmuseum Darmstadt, Darmstadt, Germany; LNK, Landessammlungen für Naturkunde, Karlsruhe, Germany; SMF, Senckenberg Museum, Frankfurt am Main, Germany; USGS, United States Geological Survey collection now housed in USNM Department of Paleobiology, Washington, D.C.; USNM, National Museum of Natural History, Smithsonian Institution, Washington, D.C.; UTCM, University of Tennessee at Chattanooga Natural History Museum, Chattanooga, TN; YPM-PU, Princeton University collection housed at Peabody Museum, Yale University, New Haven, CT.

Other Abbreviations

char(s)., character(s); CI, consistency index; GSL, greatest skull length; LMA, Land Mammal Age; MPT, most parsimonious tree(s); RI, retention index; TL, tree length.

Results

The PAUP analyses performed using the entire data matrix yield two MPT (Fig. 1; TL = 1452, CI = 0.608, RI = 0.648), differing only in the arrangement of the genus Necromanis. In one of the trees, Necromanis is the sister taxon to the living pangolins (Family Manidae, Node 8, Fig. 1), whereas in the other, Necromanis is the sister taxon to the clade including the extinct pangolins Patriomanis americana and Cryptomanis gobiensis (Family Patriomanidae, Node 7, Fig. 1). It is noteworthy that Eurotamandua joresi is interposed between Eomanis waldi and “Eomanis” krebsi at the base of the consensus tree (Fig. 1), the three forming successive sister taxa to all remaining pangolins. Based on these results, Euromanis, a new genus, is named to include “Eomanis” krebsi (see “Systematic Paleontology”). The results of these analyses are described in detail below. Characters will be referred to in these discussions according to the numeration provided in Appendix 2. A list of the apomorphies appearing at each of the nodes on the tree illustrated in Fig. 1 is provided in Appendix 4.

  1. Node 1.

    Pholidotamorpha. Definition: Node-based, the least inclusive clade including the common ancestor of Metacheiromys dasypus and Manis pentadactyla and its descendents.

Fig. 1
figure 1

Phylogeny of Pholidota based on PAUP analysis of 395 osteological characters in 15 ingroup taxa, including seven of the eight extant pangolin species, five fossil pangolins, Eurotamandua joresi, and two metacheiromyid palaeanodont genera. Characters are polarized via comparison to successive outgroups represented by the Laurasiatherian placental mammals Nandinia binotata, a basal feliform carnivoran, and the eulipotyphlan Erinaceus sp. This analysis yields two MPT (TL = 1452, CI = 0.608, RI = 0.648). The numbers in bold type at each node represent Bremer support values (given first) and bootstrap values, calculated as described in Materials and Methods. As noted in the text, Euromanis, new genus, is named based on these results, with Eomanis krebsi Storch and Martin, 1994, as the type species, to form a new combination Euromanis krebsi.

Although some relationship between palaeanodonts and pangolins is presumed in the analysis (following Storch 2003; Rose et al. 2005), the specific nature of the relationship among Palaeanodon, Metacheiromys, and pangolins is not specified a priori. The phylogenetic results identify a Palaeanodonta clade (Node 2, Fig. 1) comprised of the two palaeanodont genera Palaeanodon and Metacheiromys. This clade is in turn the sister taxon to the pangolins. The more inclusive clade, composed of palaeanodonts and pangolins, is termed here the Pholidotamorpha. This node is supported by 41 unambiguous and two ambiguous synapomorphies, the former including one feature that is identified as unique to this node in the present analysis. Unique character states are herein defined as derived states of binary characters having a CI = 1.0, or states of multistate characters that occur as synapomorphies of a given clade, appear in all members of that clade, and are not found in taxa outside that clade (following the definition of Gaudin and Wible 2006). The unique character that optimizes to this node is 340[1], squamosal forming much of the roof of the epitympanic recess (Fig. 2e).

Fig. 2
figure 2figure 2

Synapomorphies of Pholidotamorpha. Characters numbered as in Appendix 2. a Close-up of the right scapula, humerus, radius and ulna of Eomanis waldi (SMF MEA 263 cast) in lateral view, illustrating the following characters: 216[0], supinator crest greatly enlarged, with free standing proximal extension reaching to humeral mid-shaft; 227[1], olecranon process of ulna moderately elongated; 240[1], radial shaft moderately deep. b Right humerus of Metacheiromys dasypus (AMNH 11718 type) in anterior view, illustrating: 206[0], deltopectoral crest of humerus canted medially at its distal end; 216[0], supinator crest greatly enlarged, with free standing proximal extension reaching to humeral mid-shaft. c Right manus of Metacheiromys dasypus (AMNH 11718 type) in dorsal view, illustrating: 7[1], distal condyles of manual and pedal proximal phalanges divided into medial and lateral pulleys; 274[2], width of metacarpal IV ≥ 30, <45% of its length. d Skull of Eomanis waldi (Pohl specimen) in left ventrolateral view, illustrating: 309[0], premaxilla C-shaped, broad anteroposteriorly. e Left basicranial region of Smutsia gigantea (AMNH 53858) in ventral view, illustrating: 340[1], squamosal forming much of the roof of the epitympanic recess; 391[1], presence of an epitympanic sinus between squamosal and petrosal. Abbreviations: as, alisphenoid; bo, basioccipital; bs, basisphenoid; cap, capitate; cpt, capitulum; dpc, deltopectoral crest; eec, entepicondyle; en, entotympanic; eo, exoccipital; er, epitympanic recess; gt, greater tubercle; h, head; hm, hamate; hu, humerus; iof, infraorbital foramen; ip, intermediate phalanx; jf/hf, jugular and hypoglossal foramina (merged); lt, lesser tubercle; lu, lunate; mand, mandible; mc, metacarpal; mf, mental foramen; mx, maxilla; pe, petrosal; pis, pisiform; pm, premaxilla; pp, proximal phalanx; pr, promontorium of petrosal; pt, pterygoid hamulus; r, radius; s, scapula; sc, scaphoid; scr, supinator crest; sq, squamosal; tpd, trapezoid; tr, trochlea; trq, triquetrum; tym, tympanic (=ectotympanic); ul, ulna; up, ungual phalanx. b and c modified from Simpson (1931); d modified from Rose et al. (2005); e modified from Gaudin and Wible (1999). Scale bars = 1 cm.

Unambiguous synapomorphies of palaeanodonts and pangolins derive from a wide variety of skeletal elements, including the phalanges, tarsals, metatarsals, scapula, carpus, vertebrae, and the snout and ear region of the skull (Appendix 4, Fig. 2). These synapomorphies include several of the derived resemblances between palaeanodonts and pangolins noted by previous authors (Emry 1970; Rose and Emry 1993; Storch 2003; Rose et al. 2005) including: width of metatarsals III and IV >15%, <20% of length (19[1]), all metatarsals but the first wide and flat (20[1]), and width of metacarpal IV ≥ 30%, <45% of its length (274[2]), all three characters roughly equivalent to “short and broad metapodials” of Rose et al. (2005); deltopectoral crest of humerus canted medially at its distal end (206[0]); supinator crest greatly enlarged, with free standing proximal extension reaching to humeral mid-shaft (216[0]); olecranon process of ulna moderately elongated (227[1]); radial shaft moderately deep (240[1]); dorsal (facial) process of premaxilla C-shaped, broad anteroposteriorly (309[0]); and presence of an epitympanic sinus between squamosal and petrosal (391[1]). At least two of the pholidotamorph synapomorphies proposed by Storch (2003) and Rose et al. (2005) optimize to different nodes on the tree in the present study. The first, a medial buttress on the posterior portion of the mandibular ramus (395[1]), is optimized as an ambiguous convergence between Palaeanodonta (Node 2) and Eomanis waldi, because its condition is unknown in “Eomanis” krebsi, which lacks any cranial remains, and in Eurotamandua joresi, in which this part of the mandible is not visible. The second putative pangolin/palaeanodont synapomorphy, an elongate humeral entepicondyle (213[1]) is optimized as a convergence among Nandinia binotata, Metacheiromys, and Manoidea (Node 6), because Palaeanodon, Eomanis waldi, and “Eomanis” krebsi more closely resemble the condition in the second outgroup, Erinaceus sp.

  1. Node 2.

    Palaeanodonta.

    The sister group relationship between Metacheiromys and Palaeanodon is diagnosed in the present study by 13 unambiguous and 15 ambiguous synapomorphies. Five of the unambiguous characters are unique features. These include: lateral tibial condyle elongated anteroposteriorly (115[2]); entepicondylar notch of humerus weakly developed (215[1]); dorsal tuberosity of radius prominent, much larger than styloid process, pseudostyloid process weakly developed (246[3]); extensor tubercles present on dorsal surface of metacarpals II and III (288[1]); and proximal articular surface of metacarpal IV concave transversely, convex anteroposteriorly (290[2]). There are also two unique character states that are ambiguously optimized to this node: pubis elongate, rod-like, attached to ilium beneath midpoint of acetabulum (155[0]); and teeth present but reduced with large triangular canine but only a few peg-like postcanine teeth (393[0]).

  2. Node 3.

    Pholidota. Definition: Stem-based, the most inclusive clade including the common ancestor of “Eomanis” krebsi (assigned to new genus Euromanis—see “Systematic Paleontology”) and Manis pentadactyla and its descendents, plus all taxa more closely related to this common ancestor than to Metacheiromys dasypus.

This node incorporates all the taxa whose pangolin affinities are unquestioned, plus the controversial Eurotamandua joresi. However, because Eurotamandua is nested within the clade, this node represents the most recent common ancestor of all undoubted extinct and extant pangolins, and hence seems the most reasonable place on the tree to receive the ordinal epithet Pholidota. The basal pholidotan node receives modest branch and bootstrap support (Fig. 1), but is diagnosed by a relatively small number of synapomorphies—only four unambiguous synapomorphies, two of which are unique, and eight ambiguous synapomorphies, none of which are unique (Appendix 4, Fig. 3). The two unique synapomorphies of Pholidota are the following: fibular facet of astragalus crescentic or boomerang-shaped, with concavity facing proximoplantarly or plantarly, or horseshoe-shaped, with concavity facing proximally (81[1]); and a prominent ischial spine (152[1]). The two additional unambiguous synapomorphies are: manual and pedal subungual processes form triangular platform in ventral view, with grooves along either side of subungual process leading to subungual foramina (4[1]); and distinct lateral process on lateral malleolus of fibula absent (95[0]), a character reversed in more derived pangolins (see Node 6, Appendix 4). Some of the characters ambiguously assigned to Node 4 could conceivably represent additional pholidotan synapomorphies, but their condition is unknown in “Eomanis” krebsi. These include the five unique characters optimized to Node 4, along with 12 other features (18[0], 34[0], 45[2], 56[0], 236[0], 239[0], 257[0], 305[2], 308[1], 314[1], 366[1], 384[1]; Appendix 4). The five unique features are (Fig. 3): obturator foramen small, maximum diameter of acetabulum ≥75% that of obturator foramen (150[1]); temporal lines absent (358[1]); basicranial/basifacial axis reflexed (392[1]); teeth absent (393[2]); and horizontal ramus of mandible shallow, ≤10% of maximum mandibular length (394[1]). Character 393[2] was listed as a pholidotan synapomorphy in many previous works (e.g., Rose et al. 2005), character 358[1] was listed as pholidotan synapomorphy by Gaudin and Wible (1999), and character 150[1] was listed as a pholidotan synapomorphy by Rose et al. (2005).

Node 4.

Neither Storch’s (2003) family Eomanidae nor the genus Eomanis itself is monophyletic in the trees resulting from the present study. In the cladogram illustrated in Fig. 1, Eomanis waldi, Eurotamandua joresi, and “Eomanis” krebsi form successive sister taxa to all remaining pangolins. The node uniting Eurotamandua joresi to other pangolins exclusive of “Eomanis” krebsi (Node 4, Fig. 1) is weakly supported, both in terms of branch support and bootstrap values. It is diagnosed by 23 ambiguous synapomorphies, including five unique features (Appendix 4), but, as discussed above, many of these features could not be scored in the only known specimen of “Eomanis” krebsi, including all the unique traits. Hence these features may represent synapomorphies of the entire Pholidota. There are three unambiguous synapomorphies assigned to Node 4 (Appendix 4, Fig. 3): transverse width of dorsal surface of lateral cuneiform roughly equal to proximodistal height (49[1]); astragalar head slightly displaced laterally, the distance from the lateral edge of the head to the lateral edge of the body 35–40% of the overall width of body (70[1]); and diaphragmatic vertebra situated at T10 (160[1]).

  1. Node 5.

    Eupholidota. Definition: Stem-based, the most inclusive clade including the common ancestor of Eomanis waldi and Manis pentadactyla and its descendents, plus all taxa more closely related to this common ancestor than to Eurotamandua joresi.

Fig. 3
figure 3

Synapomorphies of Pholidota. Characters numbered as in Appendix 2. a Right pes of Patriomanis americana (USNM P299960) in dorsal view (the medial cuneiform illustrated is from the left side, as the right one is missing), illustrating the following character: 49[1], transverse width of dorsal surface of lateral cuneiform roughly equal to proximodistal height. b Right astragalus of Patriomanis americana (USNM P299960) in lateral view, illustrating: 81[1], fibular facet of astragalus crescent-shaped, with concavity facing proximoplantarly. c Right second and third ungual phalanges of Euromanis krebsi (SMF 94/1 cast), the latter shown in ventral view, the former in lateral view, illustrating: 4[1], manual and pedal subungual processes form triangular platform in ventral view, with grooves along either side of subungual processes leading to subungual foramina. d Right pelvis and sacral vertebrae of Patriomanis americana (USNM P299960) in lateral view, illustrating: 150[1], obturator foramen small, maximum diameter of acetabulum ≥75 % that of obturator foramen; 152[1], prominent ischial spine. e Skull of Phataginus tricuspis (CM 86715) in right lateral view, illustrating: 358[1], temporal lines absent; 392[1], basicranial/basifacial axis reflexed (gray lines indicate plane of basicranial and basifacial axes, respectively); 393[2], teeth absent; 394[1], horizontal ramus of mandible shallow, ≤10% of maximum mandibular length. Abbreviations: acet, acetabulum; ast, astragalus; clc, calcaneus; cu, cuboid; ef, ectal facet; ff, fibular facet; h, head; il, ilium; ip, intermediate phalanx; isch, ischium; issp, ischial spine; lcu, lateral cuneiform; mecu, medial cuneiform; mt, metatarsal; obf, obturator foramen; pp, proximal phalanx; prh, prehallux; sunp, subungual process; sv, sacral vertebrae; up, ungual phalanx. Scale bars = 1 cm.

In comparison to Nodes 3 and 4, Node 5 received stronger branch support, and is supported by many more unambiguous synapomorphies, though it has relatively weak bootstrap values. Eomanis waldi shares 13 unambiguous synapomorphies (Appendix 4, Fig. 4) with other pangolins exclusive of “Eomanis” krebsi and Eurotamandua joresi, four of which are unique features: lesser trochanter displaced distally, distance between femoral head and tip of lesser trochanter ≥25% maximum femoral length (129[1]); pubis short, flat, attached to ilium under posterior edge of acetabulum (155[2]); mandibular condyle at the level of the mandibular symphysis (370[1]); and temporal fossa on braincase strongly reduced (384[2]). Node 5 also has 13 ambiguous synapomorphies, one of which is unique (Fig. 4b): long axis of humeral head oriented distomedially in posterior view (205[1]). The condition for the latter character is unknown in both “Eomanis” krebsi and Eurotamandua joresi. As noted in Appendix 4, there is only one character that is convergent between “Eomanis” krebsi and Eomanis waldi on the tree in Fig. 1, and only one convergence between “Eomanis” krebsi and Node 5. Therefore, this analysis provides almost no support for the monophyly of Eomanis.

  1. Node 6.

    Manoidea. Definition: Stem-based, the most inclusive clade including the common ancestor of Patriomanis americana and Manis pentadactyla and its descendents, plus all taxa more closely related to this common ancestor than to Eomanis waldi.

Fig. 4
figure 4

Synapomorphies of Eupholidota. Characters numbered as in Appendix 2. a Right femur of Phataginus tricuspis (CM 16206) in anterior view, illustrating the following character: 129[1], lesser trochanter displaced distally, distance between femoral head and tip of lesser trochanter ≥25% maximum femoral length. b Left humerus of Smutsia temminckii (AMNH 168954) in posterior view, illustrating: 205[1], long axis of humeral head oriented distomedially in posterior view (gray lines indicate long axes of humeral head and humeral shaft, respectively). c Right pelvis and sacral vertebrae of Patriomanis americana (USNM P299960) in lateral view, illustrating: 155[2], pubis short, flat, attached to ilium under posterior edge of acetabulum. d Skull of Phataginus tricuspis (CM 86715) in right lateral view, illustrating: 370[1], mandibular condyle at the level of the mandibular symphysis; 384[2], temporal fossa on braincase strongly reduced. Abbreviations: acet, acetabulum; cp, condylar process; eec, entepicondyle; f, frontal; gtr, greater trochanter; h, head; il, ilium; isch, ischium; l, lacrimal; ltr, lesser trochanter; mand, mandible; ms, mandibular symphysis; mx, maxilla; n, nasal; oc, occipital; os, orbitosphenoid; p, parietal; pal, palatine; pm, premaxilla; pub, pubis; sq, squamosal; sv, sacral vertebrae; tym, tympanic (=ectotympanic); zp, zygomatic process. a modified from Gaudin et al. (2006). Scale bars = 1 cm.

The clade including all extant pangolins plus the non-Messel fossil pangolins is one of the most robust on the tree. It has the third highest branch support, and a bootstrap value of 100. Because this node includes two apparently monophyletic families of pangolins, one extinct (Patriomanidae, Node 7) and one including all the extant taxa (Manidae, Node 8), the superfamilial name “Manoidea” is applied to this clade. Manoidea is diagnosed by a large number of synapomorphies (Appendix 4, Fig. 5), including many of the features used in prior works to diagnose the order Pholidota as a whole. There are 27 unambiguous synapomorphies assigned to this node, six of them unique: fissured ungual phalanges (1[1]); embracing lumbar zygapophyses (166[1]); neural spines of anterior thoracic vertebrae not dramatically elongated relative to those of more posterior thoracics (167[1]); acromion process of scapula rudimentary (198[1]); anterodorsolaterally directed prongs on outer surface of mandibular symphyseal region well developed into tooth-like, conical prongs (366[2]); and alisphenoid/parietal contact absent (383[1]). There are an additional 23 ambiguous synapomorphies assigned to this node, and six of these represent unique features (Fig. 5): prehallux present (36[1]); extension of astragalar trochlea onto ventral surface of astragalus absent (65[1]); astragalus/cuboid contact present (80[1]); presence of a pit for the attachment of the meniscal ligament anterior to the medial condyle of tibia (117[1]); foramen rotundum and sphenorbital fissure confluent, opening into same fossa (324[1]); and presence of tympanic process of pterygoid (347[1]). Of these latter six features, only one could be coded for either species of Eomanis (117[0] in “Eomanis” krebsi; Appendix 3), leaving open the possibility that some are derived at a more inclusive level. Additional unambiguous and ambiguous synapomorphies assigned to this node have appeared as pholidotan synapomorphies in the works of previous authors (Emry 1970; Gaudin and Wible 1999; Rose et al. 2005; Fig. 5), including: distance between proximal end of femur and third trochanter ≥50, <60% of maximum length of femur (128[1], unambiguous); coracoid process of scapula absent (200[2], ambiguous); presence of a sesamoid facet on the radial head (244[1], unambiguous); fusion of scaphoid and lunate bones (249[1], unambiguous); anterior border of nasal with a deep notch forming elongated medial and lateral processes (306[1], unambiguous); dorsal (facial) process of premaxilla inclined posterodorsally (309[1], unambiguous); zygomatic process of squamosal ventrally directed, elongated (355[1], unambiguous); tentorial ossification present but weak, developed only inferiorly on petrosal (361[1], ambiguous); and coronoid process of mandible present but strongly reduced in size (371[1], unambiguous).

  1. Node 7.

    Patriomanidae. Definition: Stem-based, the most inclusive clade including the common ancestor of Patriomanis americana and Cryptomanis gobiensis and its descendents, plus all taxa more closely related to this common ancestor than to Manis pentadactyla.

Fig. 5
figure 5figure 5

Synapomorphies of Manoidea. Characters numbered as in Appendix 2. a Right manus of Phataginus tricuspis (CM 16206) in dorsal view, illustrating the following characters: 1[1], fissured ungual phalanges; 249[1], fusion of scaphoid and lunate bones. b Dorsal vertebrae, ribcage, sternum, sacrum and pelvis of Phataginus tricuspis (CM 16206) in left lateral view, illustrating: 167[1], neural spines of anterior thoracic vertebrae not dramatically elongated relative to those of more posterior thoracics. c Lumbar vertebra of Patriomanis americana (USNM P299960) in anterior view, illustrating: 166[1], embracing lumbar zygapophyses. d Left scapula of Smutsia temminckii (AMNH 168955) in lateral view, illustrating: 198[1], acromion process of scapula rudimentary. e Skull of Phataginus tricuspis (CM 86715) in right lateral view, illustrating: 309[1], dorsal process of the premaxilla inclined posterodorsally; 324[1], foramen rotundum and sphenorbital fissure confluent, opening into same fossa; 355[1], zygomatic process of squamosal ventrally directed, elongated; 366[2], anterodorsolaterally directed prongs on outer surface of mandibular symphyseal region well developed into tooth-like, conical prongs; 383[1], alisphenoid/parietal contact absent. f Right pes of Patriomanis americana (USNM P299960) in dorsal view (the medial cuneiform illustrated is from the left side, as the right one is missing), illustrating: 1[1], fissured ungual phalanges; 36[1], prehallux present; 65[1], extension of astragalar trochlea onto ventral surface of astragalus absent; 80[1], astragalus/cuboid contact present. g Right tibia of Patriomanis americana (USNM P299960) in proximal view, illustrating: 117[1], presence of a pit for the attachment of the meniscal ligament anterior to the medial condyle of the tibia. h Basicranium of Smutsia gigantea (CM 5764) in ventrolateral view, illustrating: 347[1], presence of tympanic process of pterygoid. Abbreviations: ap, acromion process; ast, astragalus; bo, basioccipital; bs, basisphenoid; cap, capitate; cent, vertebral centrum; clc, calcaneus; cp, condylar process; cu, cuboid; cyf, cyamelle facet; f, frontal; hf, hypoglossal foramen; hm, hamate; il, ilium; ip, intermediate phalanx; isf, infraspinous fossa; jf, jugular foramen; l, lacrimal; lco, lateral condyle; lv, lumbar vertebra; mand, mandible; mc, metacarpal; mco, medial condyle; mecu, medial cuneiform; mnp, mandibular prong; mp, metapophysis; mt, metatarsal; mx, maxilla; ns, neural spine; occ, occipital condyle; os, orbitosphenoid; p, parietal; pal, palatine; pgf, postglenoid foramen; pis, pisiform; pm, premaxilla; pp, proximal phalanx; pr, promontorium of petrosal; prh, prehallux; pt, pterygoid; s, scapula; sclu, scapholunate; sq, squamosal; ssf, supraspinous fossa; tp, transverse process; tpd, trapezoid; tpm, trapezium; trq, triquetrum; up, ungual phalanx; vc, vertebral canal; xs, xiphisternum; zp, zygomatic process. b based in part on Kingdon (1974). c modified from Rose et al. (2005). Scale bars = 1 cm.

Two fossil pangolins from the late Eocene together form a monophyletic clade in the present study, including the type genus for the family Patriomanidae erected by Szalay and Schrenk (1998), Patriomanis. The contents of this clade conform to Gaudin et al.’s (2006) redefined Patriomanidae, including their new taxon Cryptomanis gobiensis (Gaudin et al. 2006), but excluding Eomanis and Necromanis, taxa originally placed in the family by Szalay and Schrenk (1998). Patriomanidae receives only weak branch support and bootstrap values (Fig. 1). It is diagnosed by 16 unambiguous synapomorphies, three of them unique (Appendix 4, Fig. 6): posterior process of proximal fibula immediately distal to proximal tibial facet, process marked by elongated posterior groove(s) bounded by lateral ridges (100[1]); distal tibial articulation for fibula not visible in distal view (112[0]); and gluteal fossa on ilium large, with prominent lateral iliac crest, medial dorsal flange of ilium and caudal dorsal iliac spine (146[0]). Of the characters employed by Szalay and Schrenk (1998) to diagnose this group, one appears at this node as an ambiguous synapomorphy (Fig. 6a): astragalus with distinct ventral facet for the tendon of the m. flexor digitorum fibularis (66[0]). Other diagnostic features of Patriomanidae recognized by Szalay and Schrenk (1998—characters 76, 77, 88, 128, 166, 328, 381, 384) and Gaudin et al. (2006—character 241) are not found to support this node in the present analysis.

Fig. 6
figure 6

Synapomorphies of the Patriomanidae. Characters numbered as in Appendix 2. a Right astragalus of Patriomanis americana (USNM P299960) in ventral view, illustrating the following characters: 66[0], astragalus with distinct ventral facet for the tendon of the m. flexor digitorum fibularis; 74[0], ectal facet of astragalus very narrow, maximum length more than twice width measured perpendicular to long axis. b Right pelvis and sacral vertebrae of Patriomanis americana (USNM P299960) in lateral view, illustrating: 146[0], gluteal fossa on ilium large, with prominent lateral iliac crest, medial dorsal flange of ilium and caudal dorsal iliac spine. c Right fibula of Cryptomanis gobiensis (AMNH 26140) in posterior view, illustrating: 100[1], posterior process of proximal fibula immediately distal to proximal tibial facet, process marked by elongated posterior groove(s) bounded by lateral ridges. Abbreviations: acet, acetabulum; astf, fibular astragalar facet; cdis, caudal dorsal iliac spine; clcf, fibular calcaneal facet; ef, ectal facet; h, head; il, ilium; isch, ischium; lilc, lateral iliac crest; lplm, lateral process of lateral malleolus of fibula; mdf, medial dorsal flange of ilium; suf, sustentacular facet; sv, sacral vertebra; tif, proximal tibial facet of fibula. c modified from Gaudin et al. (2006). Scale bars = 1 cm.

The results from the present study do not unambiguously resolve the phylogenetic affinities of the mid-Tertiary (Oligocene–Miocene) European pangolin Necromanis. In one of the MPT, Necromanis is placed as a sister taxon to Patriomanidae. In the other MPT, Necromanis is allied with modern pangolins as the sister-taxon to Manidae. The former relationship is supported by 12 ambiguous and ten unambiguous synapomorphies, including two unique features (Appendix 4, Fig. 7): ectal facet of astragalus very narrow, maximum length more than twice width measured perpendicular to long axis (74[0]); and deltopectoral crest elongated, extending >75% of the length of humerus (207[0]). Character 66(0) described above, the flexor digitorum fibularis facet on the astragalus, also serves as an unambiguous synapomorphy of Necromanis and Patriomanidae. An alliance of Necromanis within the Manidae is supported by a virtually identical numbers of synapomorphies—13 ambiguous and ten unambiguous synapomorphies, with three unique features (Appendix 4, Fig. 7): presence of medial depression on ventromedial surface of proximal metatarsal II (23[1]); lunate surface of acetabulum C-shaped, nearly a closed loop (148[1]); and loss of angular process of mandible (372[1]). In addition, two of the resemblances cited by Gaudin et al. (2006) between Necromanis and Manidae appear as unambiguous synapomorphies at this node: distal keel on metatarsals and metacarpals takes the form of an elongated ventral ridge on ventral half of articulation (8[1]—intermediate between the primitive condition and the condition in modern manids); and, distance between proximal end of femur and third trochanter ≥60%, <70% of maximum femoral length (128[2]).

  1. Node 8.

    Manidae. Definition: Stem-based, the most inclusive clade including the common ancestor of Phataginus tricuspis and Manis pentadactyla and its descendents, plus all taxa more closely related to this common ancestor than to Patriomanis americana.

Fig. 7
figure 7

Synapomorphies of Necromanis with Patriomanidae and Manidae. Characters numbered as in Appendix 2. a Right astragalus of Patriomanis americana (USNM P299960) in ventral view, illustrating the following characters: 66[0], astragalus with distinct ventral facet for the tendon of the m. flexor digitorum fibularis; 74[0], ectal facet of astragalus very narrow, maximum length more than twice width measured perpendicular to long axis. b Right humerus of Patriomanis americana (USNM P531556) in anterior view, illustrating: 207[0], deltopectoral crest elongated, extending >75% of the length of humerus. c Mandible of Smutsia gigantea (AMNH 53858) in left lateral view, illustrating: 372[1], absence of angular process. d Sacrum and pelvis of Phataginus tricuspis (CM 16206) in left lateral view, illustrating: 148[1], lunate surface of acetabulum C-shaped, nearly a closed loop. e Right femur of Necromanis in anterior view, illustrating: 128[2], distance between proximal end of femur and third trochanter ≥60%, <70% of maximum femoral length. Abbreviations: acet, acetabulum; cp, condylar process; cpt, capitulum; dpc, deltopectoral crest; eec, entepicondyle; ef, ectal facet; gt, greater tubercle; gtr, greater trochanter; h, astragalar head; il, ilium; isch, ischium; lt, lesser tubercle; ltr, lesser trochanter; mf, mental foramen; mnp, mandibular prong; ms, mandibular spout/symphysis; obf, obturator foramen; pg, patellar groove; pub, pubis; suf, sustentacular facet; sv, sacral vertebra; tr, trochlea; tt, third trochanter. e modified from Emry (1970). Scale bars = 1 cm.

As in the previous phylogenetic analysis by Gaudin and Wible (1999), in the present study the extant pangolins are united in a monophyletic clade to the exclusion of the fossil forms. This clade is designated as the family Manidae, following the usage of Szalay and Schrenk (1998), Gaudin et al. (2006), and others. The living pangolins share a host of derived anatomical features not found in the known fossil pangolins, and the node is the second strongest on the tree, behind only the node uniting the African tree pangolins. It has a bootstrap value of 100 and a Bremer support of 35 (Fig. 1). The node is supported by the longest list of synapomorphies of any node in the analysis—77 unambiguous synapomorphies, 30 of which are unique, and 24 ambiguous synapomorphies, five of which are unique (Appendix 4, Fig. 8).

Fig. 8
figure 8figure 8figure 8

Synapomorphies of the Manidae. Characters numbered as in Appendix 2. a Left pes of Phataginus tricuspis (CM 16206) in dorsal view, illustrating the following characters: 8[2], distal keel on metatarsals and metacarpals extends along entire dorsoventral length of condyle, dorsal fossa above condyle absent; 21[1], metatarsal III short, <28% tibial length; 24[1], proximal end of metatarsal II expanded transversely; 26[1], proximal articular facet of metatarsal III overlaps dorsal surface of shaft; 49[2], dorsal surface of lateral cuneiform widened transversely, ratio of width to height ≥1.4; 56[1], maximum length of calcaneal facet of cuboid ≤80%, >70% maximum height of cuboid; 63[2], astragalar trochlea strongly asymmetrical, ratio of lateral to medial depth ≥1.4; 69[1], width of astragalar neck ≥60% maximum width of astragalus. b Right astragalus of Phataginus tricuspis (CM 16206, on left) and Patriomanis americana (USNM P299960, on right) in distal view, illustrating: 59[1], astragalar head of navicular concave dorsolaterally, convex ventromedially; 59[0], astragalar head evenly convex. c Left femur of Phataginus tricuspis (CM 16206, on left) and Patriomanis americana (USNM P299960, on right) in proximal view, illustrating: 125[0], anteroposterior depth of greater trochanter of femur > transverse width; 125[2], greater trochanter of femur compressed anteroposteriorly, anteroposterior depth ≤ transverse width; 131[0], fovea capitis present; 131[1], fovea capitis absent. d Left calcaneus of Phataginus tricuspis (CM 16206) in dorsal view, illustrating: 89[2], sustentacular facet on calcaneus situated well distal to astragalar and fibular facets, contacting distal margin of calcaneus. e Left femur of Phataginus tricuspis (CM 16206) in posterior view, illustrating: 132[1], femoral trochanteric fossa and intertrochanteric ridge rudimentary or absent. f Pelvis and sacrum of Manis javanica (USNM 198852) in dorsal view, illustrating: 136[1], sacroiliac attachment fused; 140[1], dorsal spinal nerve foramina of sacral vertebrae face dorsolaterally, situated immediately underneath metapophyses. g Right scapula of Phataginus tricuspis (CM 16206) in distal view, illustrating: 204[1], scapular spine reduced in height, height <85% mediolateral width of glenoid (gray lines indicate height of scapular spine and width of glenoid); h Left tibia and fibula of Phataginus tricuspis (CM 16206) in anterior view, illustrating: 102[2], anterolateral eminence on proximal fibula present opposite tibial facet; 103[2], cnemial crest of tibia weak, rounded, lacking lateral excavation. i Pelvis and sacrum of Smutsia gigantea (AMNH 53858) in right lateral view, illustrating: 142[1], transverse process of last sacral vertebra unexpanded, rod-like; 144[1], metapophyses of sacral vertebrae elongated, >2/3 neural spine height; 146[2], gluteal fossa poorly demarcated, iliac crest rounded, weak, dorsal flange absent, caudal dorsal iliac spine incorporated in sacroiliac junction; 153[1], ischial spine situated close to ischial tuberosity, dorsal to posterior portion of obturator foramen; 154[1], dorsal edge of ischium ventral to transverse processes of sacral vertebrae. j Left radius of Phataginus tricuspis (CM 16206, on left) and Patriomanis americana (USNM P299960, on right) in proximal view, illustrating: 244[2], sesamoid facet on radial head large, visible in proximal view. k Left radius of Phataginus tricuspis (CM 16206, on left) and Patriomanis americana (USNM P299960, on right) in anterior view, illustrating: 246[0], styloid process rudimentary, pseudostyloid process prominent, dorsal tuberosity weak; 246[2], styloid process and dorsal tuberosity of distal radius prominent, pseudostyloid process rudimentary or absent. l Right manus of Phataginus tricuspis (CM 16206) in dorsal view, illustrating: 6[2], distal condyles of manual and pedal intermediate phalanges nearly uniform in width, lateral fossae for tendinous insertion obscured in dorsal view by lateral ridges of distal condyles; 8[2], distal keel on metatarsals and metacarpals extends along entire dorsoventral length of condyle, dorsal fossa above condyle absent; 260[2], scapholunar facet on trapezoid tilted to face proximally and medially in dorsal view; 289[1], dorsal surface of metacarpal IV T-shaped at proximal end, extended laterally and medially for articulations with metacarpals III and V; 301[1], proximal articulations of manual intermediate phalanges not visible in dorsal view due to presence of proximally elongated dorsal midline process. m Left basicranial region of Smutsia gigantea (AMNH 53858) in ventral view, illustrating: 334[1], promontorium of petrosal weakly developed, flat; 336[1], distal tip of tympanohyal fused to lateral surface of promontorium; 337[1], fenestra cochleae situated immediately next to fenestra vestibuli, facing laterally and slightly posteriorly; 339[2], fossa incudis situated in medial wall of epitympanic recess, facing laterally. Abbreviations: acet, acetabulum; ast, astragalus; bo, basioccipital; cav, caudal vertebra; clc, calcaneus; cpf, capitular facet; cu, cuboid; cuf, cuboid facet; dt, dorsal tuberosity; ef, ectal facet; en, entotympanic; fc, fenestra cochleae; ff, fibular facet; fi, fossa incudis; fib, fibula; fv, fenestra vestibuli; fvc, fovea capitis; gtr, greater trochanter; h, head; il, ilium; ip, intermediate phalanx; isch, ischium; issp, ischial spine; istb, ischial tuberosity; jf/hf, jugular and hypoglossal foramina (merged); lco, lateral condyle; lcu, lateral cuneiform; ltr, lesser trochanter; ltro, lateral trochlea; lv, lumbar vertebra; mc, metacarpal; mco, medial condyle; mecu, medial cuneiform; mma, medial malleolus; mp, metapophysis; mt, metatarsal; mtro, medial trochlea; nav, navicular; ns, neural spine; obb, oblique border; obf, obturator foramen; pe, petrosal; perp, peroneal process; pp, proximal phalanx; pr, promontorium of petrosal; prh, prehallux; pstp, pseudostyloid process; pt, pterygoid hamulus; pub, pubis; rtu, radial tuberosity; sef, radial sesamoid facet; sq, squamosal; stp, styloid process; suf, sustentacular facet; sv, sacral vertebra; th, tympanohyal; tib, tibia; tpd, trapezoid; trf, trochanteric fossa; trof, trochlear facet; ttb, tibial tuberosity; up, ungual phalanx. f modified from Rose and Emry (1993). h modified from Gaudin et al. (2006). m modified from Gaudin and Wible (1999). Scale bars = 1 cm.

The following is a list of the unique, unambiguous synapomorphies of extant pangolins: proximal articulations of manual and pedal intermediate phalanges with deep paired fossae, elongated dorsoventrally with poorly marked lateral ridges (5[2]); distal keel on metatarsals and metacarpals extends along entire dorsoventral length of condyle, dorsal fossa above condyle absent (8[2]); proximal end of metatarsal II expanded transversely (24[1]); dorsal surface of lateral cuneiform widened transversely, ratio of width to height ≥1.4 (49[2]); astragalar facet of navicular concave ventromedially, convex dorsolaterally, astragalar head with large corresponding concavity (59[1]); sustentacular facet on calcaneus situated well distal to ectal and fibular facets, contacting distal margin of calcaneus (89[2]); anterolateral eminence on proximal fibula present opposite tibial facet (102[2]); greater trochanter of femur compressed anteroposteriorly, anteroposterior depth ≤ transverse width (125[2]); fovea capitis of femur absent (131[1]); femoral trochanteric fossa and intertrochanteric ridge rudimentary or absent (132[1]); sacroiliac attachment fused (136[1]); metapophyses of sacral vertebrae: elongated, >2/3 neural spine height (144[1]); ischial spine situated close to ischial tuberosities, dorsal to posterior portion of obturator foramen (153[1]); scapular spine reduced in height, <85% of mediolateral width of glenoid (204[1]); sesamoid facet on radial head large, visible in proximal view (244[2]); styloid process and dorsal tuberosity of distal radius prominent, pseudostyloid process rudimentary or absent (246[2]); trapezoid and capitular articular facets on scapholunar continuous (254[1]); scapholunar facet on trapezoid tilted to face proximally and medially in dorsal view (260[2]); capitular facet of metacarpal III extended to form dorsal shelf, creating sigmoid-shaped surface in medial view (284[1]), dorsal surface of metacarpal IV T-shaped at proximal end, extended laterally and medially for articulations with metacarpals III and V (289[1]); proximal articulation of metacarpal IV mostly convex but with strong concave pit (290[1]); shafts of proximal and intermediate manual phalanges compressed mediolaterally, width < depth (296[1]); proximal articulations of manual intermediate phalanges not visible in dorsal view due to presence of proximally elongated dorsal midline process (301[1]); fenestra cochleae situated immediately next to fenestra vestibuli, facing laterally and slightly posteriorly (337[1]); fossa incudis situated in medial wall of epitympanic recess, facing laterally (339[2]); nuchal crest rudimentary to absent (352[1]); endocranial venous grooves absent (362[1]); floor of middle cranial fossa formed by squamosal (363[1]); lateral exposure of mastoid and posttympanic process of squamosal absent (387[1]); and superior petrosal sinus perforates ventral portion of tentorium (389[1]).

The above list includes four of the six unambiguous cranial synapomorphies of extant pangolins identified by Gaudin and Wible (1999), the only exceptions being the loss of the coronoid process of the mandible (371[2]), and a flat, weakly-developed promontorium of the petrosal (334[1]), both of which are unambiguous but not unique synapomorphies of manids in the present study. However, the present study recognizes an additional eight unambiguous cranial synapomorphies of Manidae (311[1], 317[2], 319[1], 336[1], 339[2], 353[1], 387[1], 389[1]) not identified in the Gaudin and Wible (1999) study, three of which are unique (339[2], 387[1], 389[1]).

  1. Node 9.

    Maninae. Definition: Stem-based, the most inclusive clade including the common ancestor of Manis javanica and Manis pentadactyla and its descendents, plus all taxa more closely related to this common ancestor than to Phataginus tricuspis.

Manis Definition: Node-based, the least inclusive clade including the common ancestor of Manis pentadactyla and Manis javanica and its descendents.

The Manidae is split into two primary clades that reflect the main biogeographic divisions within the group. One clade includes the four African pangolin species—it will be discussed below. The other clade includes three species of Asian pangolins. These three species are placed in the genus Manis, because one of them, M. pentadactyla, is the type species for the genus (Pocock 1924; Schlitter 2005). This is also consistent with the usage of most authors who have split modern pangolins into multiple genera (Patterson 1978; Corbet and Hill 1991; McKenna and Bell 1997; Koenigswald 1999), the exception being Pocock (1924), who placed the three Asian species in three separate genera. This Asian clade receives strong support from the bootstrap analysis (bootstrap value of 97; Fig. 1) and has a high level of Bremer support (13; Fig. 1). The monophyly of Manis is supported by 24 unambiguous and 29 ambiguous synapomorphies (Appendix 4, Fig. 9). Seven of the unambiguous synapomorphies are unique to this clade: presence of deep groove for calcaneal-navicular “spring” ligament on ventral margin of astragalar head (72[1]); groove for tendon of m. tibialis posterior on posterior distal surface of tibia deep, closed over by soft tissue to form a tunnel (108[1]); transverse foramen of axis visible in anterior view (185[1]); proximal articulation on capitate very wide, ≥85% of maximum dorsoventral depth of capitate (262[4]); broad orbitosphenoid/squamosal contact (322[2]); facial nerve travels within closed canal formed by promontorium and crista parotica (335[2]); and body of incus stout and rectangular, crura short (343[1]). There is also one unique ambiguous synapomorphy of this clade (Fig. 9d): cartilaginous extension of xiphisternum elongated, length much greater than ossified portion of xiphisternum, shovel shaped at distal end with central perforation (194[1]). Because it is a soft tissue character, it could not be coded for the fossil pangolin taxa.

Fig. 9
figure 9figure 9

Synapomorphies of Manis. Characters numbered as in Appendix 2. a Left astragalus of Phataginus tricuspis (CM 16206, on left) and Manis javanica (USNM 198852, on right) in ventral view, illustrating the following characters: 72[1], presence of deep groove for calcaneal-navicular “spring” ligament on ventral margin of astragalar head; 78[1], sustentacular facet of astragalus in midline of astragalar neck; 78[2], sustentacular facet near medial edge of astragalar neck. b Left tibia of Manis javanica (CM 40597) in distal view, illustrating: 108[1], groove for m. tibialis posterior tendon deep, closed over by soft tissue to form tunnel. c Axis of Manis javanica (CM 40597) in anterior view, illustrating: 185[1], transverse foramen of axis visible in anterior view. d Ribs, costal cartilages and sternum of Manis javanica (USNM 198852) in ventral view, illustrating: 194[1], cartilaginous extension of xiphisternum elongated, length much greater than ossified portion of xiphisternum, shovel shaped at distal end with central perforation. e Left humerus of Phataginus tricuspis (CM 16206, on left) and Manis javanica (USNM 198852, on right) in anterior view, illustrating: 224[0], proximal portion of lesser tubercle of humerus extends anterolaterally, overlaps head in anterior view; 224[1], lesser tubercle does not extend anterolaterally, remains medial to head in anterior view. f Right incus of Manis crassicaudata (FMNH 57338, on left) and left incus of Smutsia temminckii (FMNH 38144, on right, distal end of crus longum broken) in lateral view, illustrating: 343[1], body of incus stout and rectangular, crura short. g Skull of Manis javanica (USNM 198852) in ventral view, illustrating: 322[2], broad orbitosphenoid/squamosal contact. Abbreviations: aas, anterior articular surface; as, alisphenoid; astf, astragalar facet; bo, basioccipital; cb, crus breve; cc, costal cartilage; cl, crus longum; cuf, cuboid facet; dpc, deltopectoral crest; eec, entepicondyle; eef, entepicondylar foramen; ef, ectal facet; f, frontal; ff, fibular facet; gmtp, groove for m. tibialis posterior tendon; gt, greater tubercle; h, head; lt, lesser tubercle; mb, manubrium; mlf, mallear facet; mma, medial malleolus of tibia; mnf, medial navicular facet; mx, maxilla; mxf, maxillary foramen; ns, neural spine; os, orbitosphenoid; pal, palatine; pe, petrosal; pm, premaxilla; pt, pterygoid; sb, sternebra; sq, squamosal; suf, sustentacular facet; tf, transverse foramen; tp, transverse process; tym, tympanic (=ectotympanic); xs, xiphisternum; zp, zygomatic process. f modified from Segall (1973). Scale bars = 1 cm.

Within the Asian clade, M. crassicaudata from the Indian subcontinent (Heath 1995) and M. pentadactyla from southern China and northern Indochina (Heath 1992a) are united to the exclusion of M. javanica from southern Indochina and the East Indies (Corbet and Hill 1991). The Bremer and bootstrap support for this node is moderately strong (5/76, Node 10, Fig. 1). The relationship is diagnosed by 23 unambiguous synapomorphies, including the following five unique features: anterior lateral distal process of tibia well developed, anterior distal process strongly reduced (104[2]); metacarpal I expanded distally in medial view, with shaft narrowing towards proximal end (277[2]); dorsal surface of metacarpal III with sharp midline crest terminating in prominent tubercle proximally (285[1]); proximal articulation of metacarpal IV semicircular in shape, with flat edge facing dorsally (291[2]); and maxilla lacking narrow posterior palatal process extending lateral to palatine (315[0]). Among the 20 ambiguous synapomorphies at this node, one is unique: distal joint surfaces flat or concavoconvex on metacarpals I-IV, joints between distal metacarpals and proximal phalanges immobile (276[2]).

  1. Node 11.

    Smutsiinae. Definition: Stem-based, the most inclusive clade including the common ancestor of Phataginus tricuspis and Smutsia temminckii and its descendents, plus all taxa more closely related to this common ancestor than to Manis pentadactyla.

As noted above, the four species of African manids are united into a monophyletic clade in the present study. This clade is the equivalent of the subfamily Smutsiinae of McKenna and Bell (1997). With a bootstrap value of 49 and a branch support of 2 (Fig. 1), it is the most weakly supported node on the tree. Nevertheless, it is diagnosed by 21 unambiguous synapomorphies, five of which are unique, and 20 ambiguous synapomorphies, one of which is unique (Appendix 4, Fig. 10). The five unambiguous unique traits are as follows: fibular facet of calcaneus extends further proximally than astragalar facet (90[2]); posterior extension of neural spine of axis absent, posterior surface of neural spine with two oval concavities for attachment of nuchal ligament (177[0]); metacarpal V forms peg-and-socket articulation with hamate, lateral tubercle of metacarpal V lies proximal to articular surface on metacarpal IV (295[1]); mallear head rotated dorsad 90°, incudal facet facing dorsally, caudally, and medially (342[2]); and stapedial columella short, height much less than greatest width of footplate (344[1]). The only unique feature among the ambiguous synapomorphies (Fig. 10e) is the posterior elongation of the cartilaginous xiphisternum such that it reaches the pelvis and then curls dorsally toward vertebral column at its distal end (194[2]).

  1. Node 12.

    Phataginus. Definition: Node-based, the least inclusive clade including the common ancestor of Phataginus tricuspis and Phataginus tetradactyla and its descendents.

Fig. 10
figure 10figure 10

Synapomorphies of the Smutsiinae. Characters numbered as in Appendix 2. a Left calcaneus of Phataginus tricuspis (CM 16206) in dorsal view, illustrating the following character: 90[2], fibular facet of calcaneus extends further proximally than astragalar facet. b Axis of Phataginus tricuspis (CM 16206, on left) and Patriomanis americana (USNM P299960, on right, incomplete specimen) in anterior view, illustrating: 183[1], width and depth of anterior articular surface of axis nearly equivalent, ratio <1.25; 184[0], axial anterior articular surface and articular facet of dens contiguous; 184[1], facets separate. c Dorsal vertebrae, ribcage, sternum, sacrum and pelvis of Phataginus tricuspis (CM 16206) in left lateral view, illustrating: 194[2], posterior elongation of the cartilaginous xiphisternum such that it reaches the pelvis and then curls dorsally toward vertebral column at its distal end. d Axis of Manis javanica (USNM 198852, on left, cranial articular facets and dens not visible, reconstructed based on other Manis) and Phataginus tricuspis (CM 16206, on right) in left lateral view, illustrating: 177[0], posterior extension of neural spine of axis absent, posterior surface of neural spine with two oval concavities for attachment of nuchal ligament. e Right manus of Phataginus tricuspis (CM 16206) in dorsal view, illustrating: 295[1], metacarpal V forms peg-and-socket articulation with hamate, lateral tubercle of metacarpal V lies proximal to articular surface on metacarpal IV. f Left malleus of Smutsia temminckii (FMNH 38144) in lateral view, illustrating: 342[2], mallear head rotated dorsad 90°, incudal facet facing dorsally, caudally, and medially. g Left stapes of Smutsia temminckii (FMNH 38144, on left) in dorsal view and right stapes of Manis crassicaudata (FMNH 57338, on left) in ventral view, illustrating: 344[0], stapedial columella elongated, height nearly equal to or exceeding greatest width of footplate; 344[1], stapedial columella short, height much less than greatest width of footplate. h Skull of Phataginus tricuspis (CM 86715) in ventral view, illustrating: 312[1] presence of vomerine exposure on palate; 330[0] presence of ectotympanic inflation. Abbreviations: aas, anterior articular surface; apm, anterior process of malleus; as, alisphenoid; bo, basioccipital; bs, basisphenoid; d, dens; ef, ectal facet; f, frontal; ff, fibular facet; hm, hamate; il, ilium; inf, incudal facet; isch, ischium; lv, lumbar vertebra; mbm, manubrium of malleus; mc, metacarpal; mx, maxilla; ns, neural spine; occ, occipital condyle; pal, palatine; perp, peroneal process; pm, premaxilla; pt, pterygoid; pub, pubis; pz, posterior zygapophysis; sq, squamosal; suf, sustentacular facet; sv, sacral vertebra; tf, transverse foramen; tp, transverse process; tv, thoracic vertebra; tym, tympanic (= ectotympanic); v, vomer; xs, xiphisternum. c based in part on Kingdon (1974). f and g modified from Segall (1973). h modified from Rose et al. (2005). Scale bars = 1 cm.

This node is the strongest on the entire tree as measured by bootstrap and branch support. It has a bootstrap value of 100, and failed to collapse even with the addition of 35 steps to the shortest tree (Fig. 1). The union of the African tree pangolins into a single clade is consistent with the taxonomy of Koenigswald (1999), who placed these two taxa in a common genus Phataginus. Patterson (1978) used Phataginus for all four African pangolin species, but the type species of Phataginus is P. tricuspis, one of the arboreal forms (Pocock 1924). Therefore, it is appropriate to apply the generic epithet to this node. The genus Phataginus is diagnosed by a large number of synapomorphies in the present study—49 unambiguous synapomorphies, ten of which are unique, and 20 ambiguous synapomorphies, none of them unique (Appendix 4, Fig. 11). The ten unique synapomorphies of the arboreal African pangolins are as follows: lateral flange of metatarsal V elongate dorsoventrally, separated from cuboid facet by pit enclosed by dorsal and ventral ridges (31[2]); cuboid facet of metatarsal V transversely compressed with width < depth, but expanded ventrally (33[1]); navicular facet of lateral cuneiform butterfly-shaped, expanded transversely on dorsal and ventral ends with concave medial and lateral margins (50[1]); concavity on astragalar facet of navicular restricted to ventral side of convexity (60[1]); proximal edge (=posterior edge) of astragalar trochlea straight or convex in dorsal view (64[1]); distal tibia compressed, ratio of maximum width to anteroposterior depth ≥2 (113[2]); lesser trochanter directed medially, largely obscured by head but visible medially in proximal view (130[2]); acetabular fossa opens ventrally (149[0]); distal edge of trochlea of humerus convex in anterior view (219[1]); and manual ungual phalanx on digit I greatly reduced, <1/2 the length of ungual phalanx V (302[2]).

  1. Node 13.

    Smutsia. Definition: Node-based, the least inclusive clade including the common ancestor of Smutsia temminckii and Smutsia gigantea and its descendents.

Fig. 11
figure 11figure 11

Synapomorphies of Phataginus. Characters numbered as in Appendix 2. a Left metatarsal V of Phataginus tricuspis (CM 16206) in proximal view (dorsal surface at bottom of figure), illustrating the following characters: 31[2], lateral flange of metatarsal V elongate dorsoventrally, separated from cuboid facet by pit enclosed by dorsal and ventral ridges; 33[1], cuboid facet transversely compressed with width<depth, but expanded ventrally. b Right tibia of Phataginus tricuspis (CM 16206) in distal view (anterior surface at top of figure), illustrating: 113[2], distal tibia compressed, ratio of maximum width to anteroposterior depth ≥2 (gray lines indicate width and depth). c Sacrum and pelvis of Phataginus tricuspis (CM 16206) in left lateral view, illustrating: 149[0], acetabular fossa opens ventrally. d Left navicular of Phataginus tricuspis (CM 16206) in proximal view (dorsal surface at bottom of figure), illustrating: 60[1], concavity on astragalar facet of navicular restricted to ventral side of convexity. e Left femur of Phataginus tricuspis (CM 16206) in posterior view, illustrating: 130[2], lesser trochanter directed medially, largely obscured by head but visible medially in proximal view. f Right manus of Phataginus tricuspis (CM 16206) in dorsal view, illustrating: 302[2], manual ungual phalanx on digit I greatly reduced, < 1/2 the length of ungual phalanx V. g Mandible of Phataginus tricuspis (CM 86715) in right dorsolateral view, illustrating: 367[1], presence of elongated medial perforation in mandibular canal. h Left humerus of Phataginus tricuspis (CM 16206) in anterior view, illustrating: 219[1], distal edge of trochlea of humerus convex in anterior view. Abbreviations: acet, acetabulum; astf, astragalar facet; cp, condylar process; cpt, capitulum; cuf, cuboid facet; eec, entepicondyle; ff, fibular facet; gmtp, groove for m. tibialis posterior tendon; gtr, greater trochanter; h, head; il, ilium; isch, ischium; lco, lateral condyle; lp, lateral process; ltr, lesser trochanter; mco, medial condyle; mma, medial malleolus; mndf, mandibular foramen; mnp, mandibular prong; ms, mandibular spout/symphysis; pub, pubis; obf, obturator foramen; sv, sacral vertebra; tr, trochlea; up, ungual phalanx. Scale bar in a and d = 0.5 cm. Scale bars in b, c, and e through h = 1 cm.

In contrast to the previous node, the clade including both African ground pangolins is substantially weaker, with a branch support of only 2 and a bootstrap value of 54 (Fig. 1). Moreover, it is supported by fewer synapomorphies than either of the other two modern genera—21 unambiguous synapomorphies, only three of which are unique, and 20 ambiguous synapomorphies, none of which are unique (Appendix 4). Nevertheless, this grouping is consistent with the taxonomies of Pocock (1924); McKenna and Bell (1997), and Koenigswald (1999) among others, and we follow these authors in assigning the two species to the genus Smutsia. The three unique synapomorphies of Smutsia are (Fig. 12): an enlarged attachment surface for the Achilles’ tendon extending forward along plantar surface of calcaneus for more than half its length (87[1]); a wide anconeal process of ulna with a maximum width >15% of maximum ulnar length (231[2]); and presence of an elongated lateral perforation in mandibular canal (368[1]).

Fig. 12
figure 12

Synapomorphies of Smutsia. Characters numbered as in Appendix 2. a Left calcaneus of Smutsia temminckii (AMNH 168954) in plantar view, illustrating the following character: 87[1], enlarged attachment surface for the Achilles’ tendon extending forward along plantar surface of calcaneus for more than half its length. b Mandible of Smutsia gigantea (AMNH 53858) in left lateral view, illustrating: 368[1], presence of an elongated lateral perforation in mandibular canal. c Left ulna of Smutsia gigantea (AMNH 53858) in anterior view, illustrating: 231[2], wide anconeal process of ulna, maximum width >15% of maximum ulnar length. Abbreviations: ancp, anconeal process; clct, calcaneal tuber; cp, condylar process; crp, coronoid process of ulna; mf, mental foramen; mnp, mandibular prong; ms, mandibular spout/symphysis; olec, olecranon; perg, peroneal groove; rn, radial notch; sn, sigmoid notch; stp, styloid process; sup, sustentacular process; utu, ulnar tuberosity. Scale bar in a = 0.5 cm. Scale bars in b and c = 1 cm.

As noted in the Materials and Methods section above, a separate analysis has been conducted using only extant taxa, in order to understand the effect in the present study of fossils and the large amount of missing data that characterizes fossil taxa. The analysis of extant taxa yields a single MPT (TL = 998, CI = 0.763, RI = 0.661; Fig. 13). This tree differs from the tree in Fig. 1 in that the genus Smutsia is allied as the sister group to the Asian pangolins in the genus Manis, rather than as the sister group to the other African genus Phataginus. This alliance between Smutsia and Manis is diagnosed by 28 unambiguous and 20 ambiguous synapomorphies, of which nine unambiguous and three ambiguous features are unique, in the analysis of only living forms. However, of the 28 unambiguous synapomorphies of this clade, 19 are known to occur either in patriomanids, Necromanis, Eomanis waldi, “Eomanis” krebsi, or Eurotamandua joresi, suggesting that the support these characters provide for such a clade should be viewed with skepticism. If these 19 characters are discounted, there are only nine characters that unambiguously support joining the African ground pangolins to the Asian pangolins. Of these, three are unique to the clade: sacroiliac junction extends past midpoint of acetabulum, sacral vertebrae contact anterior ischium (137[2]); acetabular fossa opens posteriorly (149[2]); and lacrimal bone and lacrimal foramen both absent (319[2]). One additional unique feature is found among the ambiguous synapomorphies that is not known to be present in the fossil taxa: proximal articular surface of metatarsal III roughly triangular in proximal view, narrowing ventrally (27[1]).

Fig. 13
figure 13

Phylogeny of Pholidota based on PAUP analysis of 395 osteological characters in nine taxa, including only the seven extant pangolin species examined in the present study, and two successive extant outgroups, the Laurasiatherian placental mammals Nandinia binotata, a basal feliform carnivoran, and the eulipotyphlan Erinaceus sp. This analysis yields a single MPT (TL = 998, CI = 0.763, RI = 0.661). The numbers in bold type at each node represent Bremer support values (given first) and bootstrap values, calculated as described in Materials and Methods.

A final analysis has been performed in which PAUP was constrained to produce the shortest tree(s) consistent with Gaudin and Wible’s (1999) previously published phylogenetic hypotheses. Gaudin and Wible’s (1999) cladogram differs from that illustrated in Fig. 1 in the manner in which the three extant genera recognized here are related to one another, and in the manner in which the three Asian pangolin species are arranged. In Gaudin and Wible’s study (1999), the African tree pangolins (placed here in Phataginus) formed the sister group to the Asian pangolins (Manis), whereas in the present study they are allied with the African ground pangolins (Smutsia). Furthermore, in Gaudin and Wible’s (1999) study M. crassicaudata was the sister species to M. javanica, whereas in the present study it is more closely related to M. pentadactyla. The constrained analysis yields a single MPT (TL = 1475) that is 23 steps longer than the tree illustrated in Fig. 1. The constrained MPT places all the fossil taxa in nearly the same arrangement as that shown in Fig. 1, although it allies Necromanis with the Patriomanidae and it arranges the extant taxa according to the pattern illustrated by Gaudin and Wible (1999: fig. 5).

Discussion

Because the present study encompasses virtually all the known living and fossil diversity of pangolins, and is based upon an extensive data set of morphological characters, it provides an unusually detailed picture of the phylogenetic relationships within a mammalian order. The phylogenetic patterns that are produced by these analyses are well resolved, and the internal nodes on the cladogram are by and large well supported. Therefore, this analysis should provide a firm foundation for addressing some of the persistent questions that surround the phylogeny, taxonomy, and biogeographic history of the order Pholidota.

The nature of the relationship between the extinct Palaeanodonta and the extant orders Xenarthra and Pholidota has been a longstanding conundrum in the field of placental mammal paleontology and systematics. From their earliest descriptions, the palaeanodonts have been linked to xenarthrans and pangolins because of their fossorial adaptations and reduced dentitions (Matthew 1918). Although palaeanodonts display remarkable similarities in their basicranial anatomy to the Xenarthra (Patterson et al. 1992; Gaudin 1995, 2004), several recent studies have identified a series of detailed cranial and postcranial resemblances between metacheiromyid palaeanodonts and the oldest pangolins in the genus Eomanis (Storch 2003; Rose et al. 2005; Fig. 3). We have accepted the results of these studies, as well as the earlier hypotheses of Emry (1970; Rose and Emry 1993), and assumed at the outset that palaeanodonts and pangolins form some sort of clade, although we did not specify the nature of the relationships within that clade. The results of the present study are novel, in that they provide a large number of synapomorphies that can be used to diagnose a palaeanodont and pangolin clade, and they further confirm that within that clade, Palaeanodonta and Pholidota are monophyletic sister taxa. We have labeled this palaeanodont/pangolin clade the Pholidotamorpha, and we thus restrict the use of the term “Pholidota” to the clade including all those animals more closely related to modern pangolins than to palaeanodonts, in contrast to the usage by Emry (1970) and McKenna and Bell (1997). We believe, however, that our usage is a reasonable solution to the problem outlined in the Introduction of the present study, namely, that Pholidota has been used to refer both to the clade including palaeanodonts and pangolins and to the clade containing only the extinct and extant pangolins. Furthermore, it is consistent with the most common usage of the term Pholidota, as exemplified by Mammalogy textbooks (e.g., Vaughan et al. 2000; Feldhamer et al. 2007) and other general reference works (e.g., Nowak 1999), to refer to living and fossil pangolins only.

Although the present study identifies a number of synapomorphies for a pholidotamorph clade that includes palaeanodonts (Appendix 4, Fig. 3), it cannot completely settle the issue of palaeanodont affinities. Our sample of palaeanodonts was far from exhaustive, including neither a representative from the epoicotheriid palaeanodonts nor the oldest and most primitive known palaeanodont, Escavadodon zygus (Rose and Lucas 2000). Members of the Epoicotheriidae, the most diverse of the three palaeanodont families, possess a highly derived morphology due to extreme fossorial adaptations (e.g., Rose and Emry 1983), and hence are likely too specialized to shed much light on the broader relationships of palaeanodonts. However, it would be intriguing to include Escavadodon zygus in subsequent phylogenetic studies to determine if its anatomy was also consistent with a common ancestry between pangolins and palaeanodonts. It should also be noted that our analysis did not include any representatives of the order Xenarthra, the other extant placental group to which the palaeanodonts sometimes have been linked (Simpson 1945; Patterson et al. 1992; Gaudin 1995, 2004). As discussed in the Introduction to this work and by Rose et al. (2005) and others, a definitive resolution of palaeanodont ordinal relationships still awaits a comprehensive phylogenetic study that includes representatives of all known xenarthran and pholidotamorph families, as well as a wide array of basal eutherians and representatives of a variety of placental orders, including all the major supraordinal clades. Only then can the various competing hypotheses be adequately tested.

One of the more intriguing results of the present study is its inclusion of the enigmatic “edentate” Eurotamandua joresi within the Pholidota, coupled with its lack of support for the monophyly of the genus Eomanis, and, by extension, the family Eomanidae (Fig. 1). The phylogenetic affinities of Eurotamandua have been the subject of much controversy, with various authors suggesting affinities with xenarthran anteaters (Storch 1981; Storch and Habersetzer 1991), with xenarthran pilosans (anteaters and sloths) (Gaudin and Branham 1998), palaeanodonts (Rose 1999), or a palaeanodont-pangolin assemblage (Cifelli 1983). Szalay and Schrenk (1998) went so far as to place Eurotamandua in its own order, the Afredentata, albeit with the suggestion that this group may bear some distant relationship to palaeanodonts. In the most recent review of the matter, the authors themselves could not agree on the proper allocation of Eurotamandua, with one author advocating vermilinguan affinities, and the other three suggesting a closer relationship to palaeanodonts or Eomanis (Rose et al. 2005).

Based on a series of detailed resemblances in the humerus, ulna, and third metacarpal, Rose (1999) hypothesized that Eurotamandua was a close relative of palaeanodonts. Rose et al. (2005) pointed out additional resemblances between Eurotamandua and palaeanodonts, including a loosely attached, C-shaped premaxilla, an anteriorly situated infraorbital foramen, an ossified auditory bulla, a lacrimal with subequal facial and orbital exposures, enlarged anapophyses and metapophyses in the posterior thoracic and lumbar vertebrae, and short, robust digits. Nevertheless, our results do not support a close relationship between metacheiromyid palaeanodonts and Eurotamandua. Among the autapomorphies that were assigned to Eurotamandua in the MPT shown in Fig.  1 , only four are convergent on the Palaeanodonta (Node 2; see Appendix 4): presence of a posterior distal tibial process (105[1]), styloid process of radius oriented distolaterally (247[1]), length of metacarpal II > IV (273[2]), and articulation between metacarpal II and III formed by convex facet on metacarpal II, concave facet on metacarpal III (282[2]). Of these, only 105[1] and 282[2] are features unique to Eurotamandua and the palaeanodonts among the taxa included in this study.

Shoshani et al. (1997) were the first to propose an explicit relationship between Eurotamandua and pangolins, and their hypothesis was incorporated into the classification scheme of McKenna and Bell (1997), who placed Eurotamandua into the family Manidae (equivalent to our usage of “Pholidota”), but outside the subfamilies Maninae and Smutsiinae, into which they placed all the undoubted fossil and extant pangolins, including Eomanis. Our results are closely aligned with the latter arrangement. In our MPT (Fig. 1), Eurotamandua is interposed between “Eomanis” krebsi and a clade including Eomanis waldi and all more derived pangolins. Because Eomanis (including both E. waldi and “Eomanis” krebsi) has been widely accepted as the oldest fossil pangolin genus, and E. waldi is known to bear the epidermal scales that are the hallmark of this group (Koenigswald et al. 1981), we have chosen to assign the ordinal epithet “Pholidota” to the clade whose common ancestor lies at the base of the three Messel taxa (Eurotamandua, E. waldi and “Eomanis” krebsi), making Eurotamandua a pholidotan by this definition. The basal pholidotan node is not diagnosed by a large number of apomorphies—four unambiguous synapomorphies, two of which are unique, and eight ambiguous synapomorphies (see “Results” section, Appendix 4, Fig. 3). Moreover, the node receives only modest Bremer and bootstrap support (Fig. 1). However, as noted above, the next node (Node 4; see “Results” section, Appendix 4, Figs. 1 and 3) linking Eurotamandua with other pangolins exclusive of “Eomanis” krebsi, is supported by an additional three unambiguous synapomorphies and a large number of ambiguous synapomorphies. Most of these are ambiguously assigned to this node because they could not be coded in “Eomanis” krebsi, but among these are five features that are unique to Node 4 as the matrix now stands. Thus we believe the inclusion of Eurotamandua in Pholidota is a fairly robust result of this study. Moreover, it highlights the anatomical similarity between the two genera of Messel “edentates,” Eomanis and Eurotamandua, previously noted by Rose and Emry (1993) and Rose et al. (2005). Nevertheless, as was the case with palaeanodonts, this analysis was not designed to provide a definitive resolution of the phylogenetic relationships of Eurotamandua. We have assumed at the outset that Eurotamandua was closely related to pangolins and palaeanodonts, but a definitive test of this idea would require a more extensive analysis, one that included a large sample of xenarthrans and other placental groups as well as pholidotamorphs.

It should also be made clear that although we have chosen to designate Node 3 as the order Pholidota, the term could justifiably have been applied elsewhere. Eomanis waldi is the only Messel taxon known to have possessed epidermal scales, perhaps the single most distinctive and recognizable feature of the modern pangolins. We do not know whether the other Messel forms possessed scales or not, but if we were to employ a character-based definition of Pholidota based on our present knowledge of which taxa are “scaly,” we would have assigned the term to Node 5, currently designated as the suborder Eupholidota.

The failure of the present analysis to support the monophyly of the genus Eomanis and its family, Eomanidae, is quite as surprising as its allocation of Eurotamandua. Eomanis currently has two species assigned to it, the type species, Eomanis waldi Storch, 1978, and Eomanis krebsi Storch and Martin, 1994. Whereas multiple complete or nearly complete specimens of the former are known (Appendix 1), the latter is based upon a single skeleton lacking a skull (Storch and Martin 1994). Szalay and Schrenk (1998) claimed that this specimen should not have been designated a new species of Eomanis. Rather, they believed the specimen to represent a juvenile individual of Eurotamandua joresi, despite a rather lengthy section from the original description where Storch and Martin (1994) discuss the differences between “Eomaniskrebsi and Eurotamandua. Szalay and Schrenk (1998) observed that, despite the juvenile attributes of the skeleton of “Eomaniskrebsi, including unfused epiphyses in the long bones and lack of fusion of the pelvic elements, it is much larger than all the known specimens of Eomanis waldi, and is much closer in size to Eurotamandua. They also noted similarities in the morphology of the scapula, ulna, astragalus, and third manual ungual phalanx between “Eomaniskrebsi and Eurotamandua, and implied but do not explicitly state that these features are absent in Eomanis waldi. A subsequent study by Horovitz et al. (2005) disputed the findings of Szalay and Schrenk (1998). Based on the morphology of the distal tibia and calcaneus, Horovitz et al. (2005) claimed that “Eomaniskrebsi shows distinct differences from Eurotamandua, including the absence of a posterior distal tibial process and a different arrangement of the sustentaculum astragali, and that these differences preclude a taxonomic reassignment of “Eomaniskrebsi to Eurotamandua joresi. Horovitz et al. (2005: 548), however, did not conduct a phylogenetic analysis of the relationships among the three Messel taxa, asserting at the end of their study, “Whether Eo. krebsi does indeed belong to the genus Eomanis, to Pholidota or to some other group of eutherians (the genus Eurotamandua included) remains to be solved with a higher level phylogenetic analysis of Eutheria.”

It is unfortunate that neither study included a detailed treatment of the relevant anatomy of Eomanis waldi, and that the studies focused on entirely different skeletal elements. Horovitz et al. (2005) might be faulted particularly for not addressing the similarities in the scapula, ulna, manus, and astragalus of “Eomaniskrebsi and Eurotamandua noted previously by Szalay and Schrenk (1998). The data set employed in the present study contains characters from all the skeletal elements discussed by both Szalay and Schrenk (1998) and Horovitz et al. (2005). As noted above and in Fig. 1, our results place “Eomaniskrebsi and Eurotamandua at the base of Pholidota, where they form successive sister taxa to the clade we have designated Eupholidota. There are at least 13 unambiguous and 11 ambiguous synapomorphies shared by Eomanis waldi and more derived pangolins exclusive of “Eomaniskrebsi and Eurotamandua (Appendix 4), and the node uniting Eomanis waldi to these more derived taxa (Node 5, Eupholidota) receives relatively strong branch support (Fig. 1). Although only seven of the synapomorphies from Node 5 could be coded for “Eomaniskrebsi (40, 63, 96, 151, 155, 157, 303; see Appendices 24), there are seven other characters (2, 12, 13, 70, 91, 124, 160; see Appendices 2 and 3) in the matrix for which Eomanis waldi and “Eomaniskrebsi receive different codings. Therefore, we believe there is enough evidence to conclude that Eomanis waldi and “Eomaniskrebsi do not share a unique common ancestry, and do not belong in the same genus. As noted above, in our MPTs, “Eomaniskrebsi and Eurotamandua are successive sister taxa to Eupholidota (see “Results” section; Fig. 1), and the two taxa differ in a significant number of features, including those noted by Horovitz et al. (2005—equivalent to our characters 91 and 105—see also characters 2, 3, 12, 49, 70, 124, 158, 160, and 298, Appendices 2, 3). Therefore, we have chosen to place “Eomaniskrebsi in a new genus (see “Systematic Paleontology” section below).

Storch (2003) recently advocated placing the two nominal species of Eomanis into their own separate family, Eomanidae, a group defined by the presence of pangolin synapomorphies such as horny scales and an edentulous skull, as well as by the absence of derived features of other recent and fossil pangolins, like a distally situated third trochanter of the femur and the loss of the clavicle and the zygomatic arch. Needless to say, because the results of the present study do not support the monophyly of the genus Eomanis as employed by Storch (2003), they also do not support the monophyly of his family Eomanidae. However, we do retain the name, restricting its scope so that it becomes a monotypic taxon that includes only one genus and species, Eomanis waldi.

The clade that includes all living and fossil pangolins exclusive of the Messel taxa (Node 6) is one of the best supported in the entire analysis, with the third highest Bremer support value, and a bootstrap value of 100 (Fig. 1). It is diagnosed by a very large number of synapomorphies—27 unambiguous synapomorphies, six of which are unique, and 23 ambiguous synapomorphies, six of which are also unique (Appendix 4, Fig. 5). As noted in the Results section above, this list includes many if not most of the features that have been labeled pangolin synapomorphies in previous studies (Emry 1970; Gaudin and Wible 1999; Rose et al. 2005). We have elected to apply a new superfamilial name to this node, Manoidea. In turn, Manoidea can be divided into two families, Patriomanidae, which includes only extinct pangolins, and Manidae, which includes all the extant pangolins, with one extinct Tertiary taxon, Necromanis, of uncertain affinities.

The family Patriomanidae was initially proposed by Szalay and Schrenk (1998) to house all of the then known genera of fossil pangolins, Eomanis, Patriomanis, and Necromanis. This designation allowed them to formally recognize the close “phyletic unity” (Szalay and Schrenk 1998: 172) of the extant pangolins, as well as the generally more primitive anatomies of the extinct forms as compared to those of the living taxa. Although supporting the distinction between extant pangolins in the family Manidae and the fossil forms, Storch (2003) removed Eomanis to its own family, Eomanidae. Based implicitly on new, complete but undescribed material of Necromanis, he also advocated the removal of Necromanis from the Patriomanidae. Gaudin et al. (2006) largely concurred with the conclusions of Storch (2003), suggesting that Patriomanidae as defined by Szalay and Schrenk (1998) was paraphyletic, with Eomanis more primitive than Patriomanis, and Necromanis more derived, sharing several features with modern pangolins not present in other fossil forms, including (Gaudin et al. 2006: 157) “a flat astragalar head, enlarged metapodial keels, and a more distally situated femoral third trochanter.” However, Gaudin et al. (2006) advocated the retention of a revised Patriomanidae to include only Patriomanis and their newly described genus Cryptomanis, providing a revised diagnosis for the taxonomically more restricted family.

The results of the present study support the recognition of a monophyletic family Patriomanidae with a content mirroring that of Gaudin et al. (2006), i.e., including only Patriomanis and Cryptomanis. The Patriomanidae is diagnosed by 16 unambiguous synapomorphies, including three unique features, and 13 ambiguous synapomorphies (Appendix 4, Fig. 6). As is evident in the light of prior discussions, these results corroborate assertions by Storch (2003) and Gaudin et al. (2006) that Eomanis waldi and “Eomanis” krebsi should be excluded from the Patriomanidae, contra Szalay and Schrenk (1998). The results also confirm the very strong anatomical similarities between Patriomanis and Cryptomanis noted by Gaudin et al. (2006). The weak Bremer and bootstrap support for this node can perhaps be attributed to the fact that, as Gaudin et al. (2006) pointed out, each of these taxa possesses their own suite of derived features shared with extant forms.

The phylogeny in Fig. 1 fails to resolve unambiguously the affinities of Necromanis. In one of the MPT, Necromanis is allied as the sister taxon to Patriomanidae, recalling the original formulation of the family Patriomanidae by Szalay and Schrenk (1998), who included Necromanis in the group. In the other MPT, Necromanis is placed as the sister taxon to Manidae, the clade including all extant taxa. This latter arrangement is consistent with statements by Storch (2003) implying that Necromanis was more derived than Patriomanis, i.e., more similar to living pangolins. Additionally, Gaudin et al. (2006) listed several derived features shared by Necromanis and modern pangolins but absent in patriomanids, e.g., ventrally elongated keels on the metapodials and a distally situated third trochanter on the femur. As described in the Results section above, Necromanis shares a virtually identical number of unambiguous, ambiguous, and unique synapomorphies with Patriomanidae and Manidae—ten unambiguous, 12 ambiguous, and two unique in the case of the former, ten unambiguous, 13 ambiguous, and three unique in the case of the latter (see Appendix 4). It thus shows significant morphological resemblances to both groups (Fig. 7). Heretofore, Necromanis has been known from very incomplete remains (Koenigswald 1969, 1999; Koenigswald and Martin 1990). Therefore, we anticipate that with the description and analysis of the “extremely rich and complete” new specimens of Necromanis currently under study (Storch 2003: 56), the phylogenetic affinities of this taxon might be more clearly resolved. Given this taxon’s position as the youngest of the extinct Tertiary fossil pangolin genera, a clearer understanding of its systematic position will be vital to understanding the phylogenetic and biogeographic origin of the modern forms.

Although Gaudin and Wible (1999) included only one fossil pangolin in their cladistic analysis of cranial characters, their results strongly indicated the monophyly of the extant pangolins to the exclusion of the Tertiary forms. They identified at least six unambiguous cranial synapomorphies shared by all pangolins that were absent in Patriomanis, and the node uniting the extant forms was one of the strongest in their analysis. Gaudin and Wible (1999: 57) asserted that “Tertiary pholidotans probably ought to be placed in a separate family from the living forms,” in agreement with Szalay and Schrenk (1998), who formally restricted Manidae to this group of extant taxa. This arrangement is strongly supported by the results of the present study. The node uniting extant pangolins is the second strongest in the entire analysis, with a bootstrap value of 100 and a Bremer support value of 35. The Manidae is diagnosed by more apomorphies than any other node on the tree, including 77 unambiguous synapomorphies, 30 of which are unique, and 24 ambiguous synapomorphies, five of which are unique (Appendix 4, Fig. 8). The living pangolins are considerably more derived in their skeletal anatomy than the Messel taxa, the patriomanids, and Necromanis. Cranial specializations include the loss of the coronoid process of the mandible, endocranial venous grooves, and the nuchal crest, and the flattening of the petrosal promontorium (334[1], 352[1], 361[2], 371[2]; see Appendices 2, 4, Fig. 8). Postcranial modifications of the manids include a number of features exemplifying the trend identified by Gaudin et al. (2006), of the digging adapted features becoming more distally situated, with the proximal elements becoming gracile, in the extant taxa relative to patriomanids. For example, Manidae is characterized by (Fig. 8) distal keels on the metatarsals and metacarpals that extend along the entire dorsoventral length of condyles (8[2]), a shortened third metatarsal (21[1]), a concavity on the head of the astragalus (59[1]), shafts of metacarpals and manual proximal and intermediate phalanges that are deeper than they are wide (275[1], 296[1]), a reduction in length of the manual proximal phalanges (298[3]), and elongated proximodorsal processes on the manual intermediate phalanges (301[1]), as well as a strong reduction of the cnemial crest of the tibia (103[2]), a loss of the fovea capitis, trochanteric fossa, and intertrochanteric ridge of the femur (131[1], 132[1]), strong reduction of the gluteal fossa on the ilium (146[2]), and reduction of the height of the scapular spine (204[1]). Lastly, it should be noted that the monophyly of the Manidae in the present study stands in stark contrast to the taxonomic arrangement of McKenna and Bell (1997), who allied the Tertiary pangolin genera Eomanis, Necromanis, and Patriomanis with extant Asian pangolins in a subfamily Maninae, exclusive of the extant African pangolins allocated to the subfamily Smutsiinae.

There has been considerable controversy concerning the generic level relationships among the living pangolins. The extant species have been allocated to as many as six different genera (Pocock 1924), whereas other authors have placed all in a single genus (Simpson 1945; Nowak 1999; Schlitter 2005). Patterson (1978) and Corbet and Hill (1991) arranged the living pangolins into two genera, Manis for the Asian species and Phataginus for the African species. Koenigswald (1999) suggested splitting the African forms into two genera, one for the tree pangolins (Phataginus) and one for the ground pangolins (Smutsia), an arrangement consistent with the phylogenetic results of Gaudin and Wible (1999), though the latter authors did not formally advocate for recognition of these genera given the limited taxonomic and anatomical scope of their study. McKenna and Bell (1997) offered a further division into four genera, placing the two tree pangolins into separate genera, Phataginus and Uromanis. The results of the present study are clearly consistent with the three genera arrangement. In our MPT (Fig. 1), the seven living species included in the analysis fall into three distinct clades that are moderately to very strongly supported. The Asian taxa form a clade. Because one of these species, Manis pentadactyla, is the type species for the genus Manis (Pocock 1924; Schlitter 2005), we assign all the extant Asian taxa to this genus. The African ground pangolins also form a clade assigned to the genus Smutsia, as the Cape pangolin Smutsia temminckii is the type for this genus (Pocock 1924). The African tree pangolins form the third clade, with the tree pangolin Phataginus tricuspis as the type species for the genus Phataginus that we assign to this grouping. Lastly, the two genera of African pangolins form a monophyletic group exclusive of the Asian taxa. We will refer to this clade as the subfamily Smutsiinae, following the usage of McKenna and Bell (1997).

That the present analysis yields a monophyletic clustering of the Asian pangolins is not a surprise. The distinctiveness of these animals has been amply recognized by previous workers (Pocock 1924; Grassé 1955; Emry 1970; Segall 1973; Patterson 1978; Heath 1992a), and the monophyly of this clade was well supported in the previous cladistic analysis of Gaudin and Wible (1999). In our results, the basal node for the genus Manis (Node 9) receives very strong Bremer support and has a bootstrap value of 97 (Fig. 1). It is diagnosed by 24 unambiguous synapomorphies, seven of which are unique, and 29 ambiguous synapomorphies, one of which is unique (Appendix 4, Fig. 9). Within Manis, the two more northerly distributed species, Manis pentadactyla, the Chinese pangolin from southern China, northern Indochina and the northeast portion of the Indian subcontinent (Corbet 1978; Heath 1992a), and M. crassicaudata, the Indian pangolin, which ranges from Afghanistan throughout India south to Sri Lanka (Corbet 1978; Heath 1995), are allied as sister taxa, to the exclusion of M. javanica, the Sunda pangolin, which occurs in southern Indochina and the East Indies. In Gaudin and Wible (1999), the two more easterly species were allied as sister taxa, M. javanica and M. pentadactyla. However, these authors admitted that the relationship was only weakly supported, with an alliance between M. crassicaudata and M. pentadactyla being equally parsimonious under different character weighting and ordering regimes. The clade uniting M. crassicaudata and M. pentadactyla receives modest Bremer support and has a relatively high bootstrap value (76, see Fig. 1). It is diagnosed by 23 unambiguous and 20 ambiguous synapomorphies, six of which are unique. Thus our results not only contradict Gaudin and Wible’s (1999) tree; they also offer a more robustly supported resolution of the relationships among Asian pangolins than that provided by Gaudin and Wible (1999). It should also be pointed out that when we constrained this data set to yield a tree consistent with that of Gaudin and Wible (1999), the resulting tree was 23 steps longer than our MPT.

Many of the same analyses that recognized an Asian grouping of modern pangolins also grouped the African pangolins together (Pocock 1924; Grassé 1955; Emry 1970; Segall 1973; Patterson 1978; Heath 1992a). Patterson (1978) went so far as to suggest this grouping is more derived than the Asian cluster. McKenna and Bell (1997) also recognized this grouping, assigning it the subfamilial epithet Smutsiinae. However, in the cladistic analysis of Gaudin and Wible (1999), the extant African pangolins formed a paraphyletic assemblage, with the African tree pangolins and African ground pangolins representing successive sister clades to the Asian taxa. Gaudin and Wible (1999) noted that a monophyletic African clade was obtained in a tree only one step longer than their most parsimonious tree. Our results provide clearer support for the monophyly of the extant African pangolins. Our Node 11, which we label Smutsiinae following McKenna and Bell (1997), receives rather low bootstrap and Bremer support (Fig. 1), but is diagnosed by 21 unambiguous synapomorphies, five of which are unique to the clade, as well as one unique ambiguous synapomorphy. These unique traits include not only the ossicular characters from the skull first described by Segall (1973) and highlighted by Gaudin and Wible (1999) as diagnosing this clade (Fig. 10f–g), but also features of the calcaneus, axis, metacarpal V, and xiphisternum (see “Results” section, Appendix 4, Fig. 10a–e). Given the longstanding recognition of an African grouping in the systematic literature on pangolins, and the wide range of skeletal similarities that they share, it is curious that the monophyly of this group is not supported when we restrict our analysis to living taxa only. As described in the Results section, when the analysis was repeated with all fossil taxa excluded, the resulting MPT placed the clade including the two species of African ground pangolins in a monophyletic grouping with Manis, to the exclusion of the African tree pangolins (Fig. 13). We interpret this result as more indicative of the importance of fossils for polarizing character transformations within Pholidota than as evidence of the inherent weakness of the smutsiinine node. Many of the “derived” features shared by Manis and the African ground pangolins, in fact 19 of the 28 unambiguous synapomorphies, are known to occur in Necromanis, patriomanids, or the Messel taxa, rendering their support for this relationship questionable, either because they change the nature of the character state polarization, or perhaps more directly because they change the phylogenetic distribution of the features in question. The importance of fossils in reconstructing phylogeny, particularly through their effect upon just these sorts of polarity and character distribution issues, has already been discussed extensively in the literature (e.g., see Carrano et al. 2006 and references therein). This seems to be yet another example where fossils have a significant impact on the resolution of relationships among extant taxa via the information they provide on character polarity and character distributions.

Within Smutsiinae, the results of the present study yield two monophyletic clades, one for the African ground pangolins and one for the African tree pangolins (Fig. 1). The African ground pangolins are assigned to the genus Smutsia, following Pocock’s (1924) original formulation of this genus, an arrangement also advocated by McKenna and Bell (1997) and Koenigswald (1999). The genus is comprised of the giant pangolin, Smutsia gigantea, and the Cape pangolin, Smutsia temminckii (Heath 1992b; Kingdon 1997). The monophyly of Smutsia is also consistent with the phylogenetic results of Gaudin and Wible (1999), although they noted that the node uniting the two species in their analysis collapsed in trees only one step longer than the most parsimonious. The present study provides slightly better support for this relationship. The support for this node is nearly identical to that for the Smutsiinae as a whole, with similar branch support and bootstrap values (2 and 54, respectively, Fig. 1), and an identical number of synapomorphies. The genus is diagnosed by 21 unambiguous and 20 ambiguous synapomorphies, though only three of the unambiguous synapomorphies are unique (Appendix 4, Fig. 12). The monophyly of Smutsia is also supported in the analysis that includes only living taxa, although the branch support and bootstrap values indicate that this is the weakest node on the tree (Fig. 13). It seems clear, based on our results, that this is the most weakly supported of the three extant pangolin genera, a somewhat ironic result considering that these two were the only two pangolin species that Pocock (1924) elected to place in the same genus.

Whereas Smutsia is the most weakly supported of the three extant pangolin genera in our analysis, Phataginus is the best supported. This genus includes two species of small bodied, arboreal pangolins, the tree pangolin Phataginus tricuspis, and the long-tailed pangolin, P. tetradactyla (Kingdon 1997). The node uniting the two African tree pangolins is the strongest node on the entire tree, failing to collapse even after the addition of 35 steps to the MPT, and receiving a bootstrap support value of 100. The monophyly of this genus is diagnosed by 49 synapomorphies, ten of which are unique to these two species, along with 20 ambiguous synapomorphies (Appendix 4, Fig. 11). These two species are highly distinctive skeletally relative to the other pangolins, in part because of shared adaptations for life in the trees, including some of the skeletal synapomorphies identified in the present study (e.g., more uniform, slender digits—10[0], 274[0]; more gracile limb elements—83[2], 207[2]; 210[1], 227[0]; and an elongate tail-159[0]; see Appendix 4), as well as soft tissue features like a naked pad at the end of tail that is used when employing the prehensile tail during climbing (Pocock 1924; Patterson 1978; Kingdon 1997). However, many of the shared features seem unrelated in any obvious way to climbing. The assignment of these two genera to Phataginus follows Patterson (1978), Corbet and Hill (1991), and Koenigswald (1999). It is somewhat curious that Patterson (1978) chose to place all the African pangolin species in Phataginus, given that both Smutsia and Uromanis appear to have been used in a more inclusive sense in the prior literature. Smutsia, the genus subsuming the two species of African ground pangolins, was the basis for Pocock’s (1924) subfamily Smutsiinae (also used in McKenna and Bell 1997, but incorporating all four African species). Uromanis, the genus in which Pocock (1924) placed the long-tailed pangolin, served as the basis for his subfamily Uromaninae (changed to tribe Uromanini in McKenna and Bell 1997), the group to which he assigned both species of African tree pangolins. However, as we can find no instance of the two tree pangolin species being placed together under Uromanis in the previous systematic literature, and we have at least three instances where both are placed in Phataginus, we follow the latter usage. Note that this arrangement, which is very strongly supported in our analysis, differs from the taxonomic treatment of McKenna and Bell (1997), who placed the long-tailed and tree pangolins in separate genera, Uromanis and Phataginus respectively, following Pocock (1924).

Biogeography

The systematic results of the present study have clear implications for the biogeographic history of the Pholidotamorpha, and in particular the Pholidota, and should help to resolve outstanding questions, such as the site of origin of the Pholidota as a whole and of modern pangolins in particular. As discussed in Gaudin et al. (2006), there are two likely scenarios for the site of origin of the order Pholidota (as defined in the present study). It is possible that the group is an “old African” order, like Hyracoidea and Proboscidea. This would be consistent with the extant distribution of the group, with half of the living species endemic to sub-Saharan Africa. It would also be consistent with morphology-based studies of eutherian interordinal relationship that ally Pholidota with the South American order Xenarthra (e.g., Novacek and Wyss 1986; Novacek 1992) and suggest a Gondwanan origin for this superordinal clade and its members. Finally, there is one Paleogene record of pangolins from Africa, based on several isolated ungual phalanges recovered from early Oligocene deposits in the Fayum of Egypt (Gebo and Rasmussen 1985). However, given the highly fragmentary nature of these fossils, and the absence of any additional pangolin fossils from the fairly well studied Fayum, the importance of this last piece of evidence is questionable. The second likely site of origin for Pholidota is on one of the Laurasian continents (Rose et al. 2005), and more particularly, an origin on the European landmass (Storch 2003). This scenario is consistent with most recent molecular studies of placental interordinal phylogeny, which have placed Pholidota in the Laurasiatheria, a clade that includes northern groups like Artiodactyla, Perissodactyla, Chiroptera, and the Eulipotyphla (e.g., Springer et al. 2004, 2005). These studies hypothesized a particularly close affinity between pangolins and the order Carnivora (Springer et al. 2004, 2005). As Gaudin et al. (2006) explained, this scenario is also consistent with the early fossil history of Pholidota. Not only are the oldest pholidotans, Eomanis waldi, “Eomanis” krebsi, and Eurotamandua joresi from Europe, but all of the Paleogene and early Neogene taxa represented by relatively complete fossil material obtain from Laurasian continents: from Europe, Eomanis waldi, “Eomanis” krebsi, Eurotamandua joresi, and Necromanis; Cryptomanis from Asia, and Patriomanis from North America. Finally, the results of the present study provide additional anatomical synapomorphies that serve to diagnose a sister group relationship between Palaeanodonta and Pholidota, reinforcing the robusticity of this relationship. Palaeanodonta is an extinct group endemic to Laurasia, with its center of diversity (and likely center of origin—see Rose and Lucas 2000) in North America but with representatives known from both Europe and Asia (Rose et al. 2005). Given that the likely sister-taxon to Pholidota is also Laurasian, the preponderance of evidence clearly favors a Laurasian origin for Pholidota, with the fossil record implying an origin in Europe, as indicated by Storch (2003).

This scenario was confirmed by plotting the geographic distributions of the OTU’s onto the cladogram from Fig. 1 using MacClade (Maddison and Maddison 2001). The tree illustrated in Fig. 14 represents one of the MPT used to construct the consensus tree in Fig. 1, specifically the tree in which Necromanis is sister-taxon to Manidae, but the results of the biogeographic analysis do not change if the other MPT, with Necromanis as sister to Patriomanidae, is substituted. Europe is optimized as the continent of origin for the entire Pholidotamorpha, as well as for Pholidota and its basal branches, up to and including Necromanis. The site of origin for Patriomanis and Cryptomanis is equivocal irrespective of the placement of Necromanis.

Fig. 14
figure 14

Biogeographic distributions of Pholidotamorpha mapped onto one of the two MPT used to construct the consensus phylogeny in Fig. 1 (see “Biogeography” section of text). Although only one of two MPTs is illustrated, results are identical using either MPT, i.e., whether Necromanis is placed as sister taxon to Manidae (as illustrated) or Patriomanidae. In both instances, the branches leading to the common ancestor of Manidae and Patriomanidae have an equivocal optimization, whereas all the basal nodes, including that for Manoidea, are optimized as having a European origin.

The site of origin for modern pangolins is somewhat harder to establish. The phylogenetic results of the present study (Fig. 1) are consistent with earlier analyses (e.g., Patterson 1978) that identified two clades of modern pangolins—an African clade and an Asian clade. The biogeographic distributions of both these clades lie well to the south of the areas where Paleogene and early Neogene fossil pangolins have been recovered, suggesting modern pangolins may have originated in Laurasian continents, most likely in Europe, which has the only fossil records from the Neogene, including a number of Necromanis remains as well as a dubious Pliocene record (Koenigswald 1999), and subsequently dispersed into southern Asia and sub-Saharan Africa (Gaudin et al. 2006). However, the biogeographic analysis illustrated in Fig. 14 shows the origin of the modern clade to be equivocal, and this result is obtained whether Necromanis is placed as the sister taxon to Manidae or to Patriomanidae. The fossil record of pangolins from the areas lying within their extant range does not extend far back into the Cenozoic. The oldest pangolins from Africa are Pliocene in age (Botha and Gaudin 2007—notwithstanding the one doubtful record mentioned above from the early Oligocene of Fayum, well north of the modern range of African pangolins), whereas pangolins do not even extend as far back as the Tertiary in south Asia, the oldest forms being Pleistocene in age (Guth 1958; Emry 1970). The older African record suggests a pathway of dispersal from Europe through Africa and finally into south Asia. This model would also be consistent with Patterson’s (1978) assertion that African pangolins are, as a group, more derived than the Asian taxa, because the African forms would have been resident in their current range longer and had greater opportunities for specialization. This model would be better supported, perhaps, by a phylogeny like that of Gaudin and Wible (1999) or the one obtained in our analysis using only extant taxa, in which the African species were paraphyletic sister taxa to the Asian taxa, or a phylogeny in which Necromanis was unambiguously allied as a sister taxon to the Manidae, but it is not inconsistent with the preferred phylogeny from this study (Fig. 1). It should also be remembered that the Neogene record of pangolins is, if anything, even poorer than the Paleogene record. This biogeographic scenario could easily be overturned by the discovery of one well-preserved pangolin fossil from the early Neogene of Asia.

Systematic paleontology

Class Mammalia Linnaeus, 1758

Order Pholidota Weber, 1904

Suborder Uncertain

Euromanis, new genus

Type species.Eomanis krebsi Storch and Martin, 1994

Diagnosis and Description.—As for the single included species described below.

Etymology.—‘Euro’ is a reference to the European provenance of the specimen; ‘manis’ refers to the modern genus of Asian pangolins.

Euromanis krebsi (Storch and Martin, 1994 ), new combination

Holotype.—The original (Storch and Martin 1994: figs. 1, 2, 3, 4, 5 and 6, tafel 1) is in the possession of Dr. G. Jores, Darmstadt, Germany; a cast is in the Forschunginstitut Senckenberg, Frankfurt am Main, Germany (SMF 94/1).

Distribution.—Lower middle Eocene (MP 11), Messel Formation, Messel, Germany.

Diagnosis.—Fossil pangolin larger than contemporaneous Eomanis waldi from Messel (femoral length of Euromanis krebsi = 78 mm; femoral length of Eomanis waldi (SMF MEA 263) = 58 mm). Shares pangolin synapomorphies, including crescentic fibular facet of astragalus; prominent ischiatic spine; triangular manual and pedal subungual processes with grooves along either side leading to subungual foramina; and lack of a distinct lateral process on lateral malleolus of fibula; but lacks features that define manoideans, including fissured unguals; enrolled lumbar zygapophyses; displacement of third trochanter to midshaft of femur. Generally similar to both Eomanis waldi and Eurotamandua joresi, but differing in numerous traits including: entocuneiform quadrangular in medial view, dorsoventral depth equivalent distally and proximally; anterior plantar tubercle even with or distal to cuboid facet of calcaneus; angle between femoral head and shaft <130°; neural spine of seventh cervical vertebra vertical.

Description.—Storch and Martin (1994: figs. 1, 2, 3, 4, 5 and 6, tafel 1) provided detailed descriptions and illustrations of the only known specimen, a skeleton missing the skull and parts of the shoulders, forelimbs, and tail, in a private collection in Darmstadt, Germany. Szalay and Schrenk (1998: figs. 2, 3, 4, 5, 6 and 7) provided additional illustration of the only known specimen and proposed “Eomanis krebsi” as a juvenile Eurotamandua joresi. Horovitz et al. (2005: figs. 1 and 2) reanalyzed and reillustrated ankle elements of the only known specimen. They noted differences from Eurotamandua joresi and concluded that the only known specimen and Eurotamandua joresi are separate taxa. The manual ungual phalanges of Euromanis krebsi are illustrated in the present study (Fig. 3c).

Revised classification

The phylogenetic results and conclusions of the present study are at odds in several important respects with existing, widely used taxonomic treatments of the pholidotamorph taxa (e.g., McKenna and Bell 1997; Nowak 1999; Schlitter 2005; Rose et al. 2005). Because the present study is the most detailed cladistic examination of the phylogenetic relationships among these taxa currently available (or likely to be available in the near future), we felt it important to perform a formal revision of the taxonomy of Pholidotamorpha, with particular attention paid to the Pholidota (Table 1). In this taxonomic treatment, we recognize several new higher categories and modify the content of various other families, subfamilies, genera, and subgenera. We have chosen to assign taxonomic rank to these new monophyletic groupings, but it should be noted that we do not believe these rankings to be the most significant part of the revision. The family ranks, and those below the family level, have somewhat greater significance, because these latter fall under stricter ICZN rules for priority and related matters. It does not matter greatly to us whether Pholidota is viewed as an order, a suborder, or given yet some other rank. It is the phylogenetic content of these higher-level groupings that we view as particularly significant. Note that several aspects of this classification are based on the work of other authors, and do not derive directly from our phylogenetic results. For the taxonomy of the extinct genus Necromanis, we follow Koenigswald (1999), who recognized three discrete species. As noted in the Introduction to this work, the recognition of pangolins from the Palawan and Culion Islands in the Philippines as a discrete species, Manis culionensis, postdates the research conducted for this study (Gaubert and Antunes 2005). However, Manis culionensis is very similar anatomically to Manis javanica, and was widely considered a subspecies of the latter prior to the work of Gaubert and Antunes (2005). Therefore, we are placing it in the same subgenus as Manis javanica. Finally, there are three Plio-Pleistocene species of extinct pangolin that were not included in the present study: Manis hungarica from the Pliocene of Hungary (Kormos 1934), Manis lydekkeri from the Pleistocene of India (Dubois 1908), and Manis palaeojavanica from the Pleistocene of Java (Dubois 1926). The former two species are based on isolated phalanges, and are therefore of questionable validity. The last is based on nearly complete skeletal material, but was not included in the present study for logistical reasons. Of the two extinct Asian taxa, Emry (1970:461) stated that “these differ so little from the living species that they shed little light on the history of the group,” and Patterson (1978:270) made similar assertions, claiming that these forms are “almost certainly referable to Manis.” Given their similarity to modern taxa (though both are larger, M. palaeojavanica much more so, than any living pangolin species—see Dubois 1926), and their Asian provenance, we have few qualms in assigning them to the genus Manis, although their relationship to the extant species in this genus is left unresolved. The retention of the Pliocene European species in Manis is more questionable, but given the fragmentary nature of the available material, there is little evidence for moving it elsewhere, so we leave it in Manis with some discomfort. Koenigswald (1999) suggested that M. hungarica is a nomen nudum.

Table 1 Revised classification proposed here

Synapomorphies for the new higher taxa Pholidotamorpha, Eupholidota, Eomanoidea, and Manoidea can be found in Appendix 4. Definitions for the ranks of genera and above are included in the Results.

Conclusions

The goal of the present study was to conduct a comprehensive phylogenetic analysis of the order Pholidota, examining a wide range of osteological characters from the entire skeleton in all extant species and all the well-known fossil taxa, in order to improve understanding of the systematics, and biogeographic and evolutionary history of the pangolins. In addition, the relationship of pangolins to several putative relatives, including the palaeanodonts and the enigmatic “edentate” Eurotamandua, were investigated. Data were collected from all extant species except for one recently recognized form from a small group of islands in the Philippines, and from all well-known fossil species except for a giant Pleistocene taxon from Java, Manis palaeojavanica, and one recently described specimen from South Africa. The phylogeny resulting from this study (Fig. 1) is largely well resolved and well supported. It includes only one unresolved polytomy, an internal node (Node 6, Manoidea) that joins the extant family Manidae, the extinct Tertiary family Patriomanidae, and the extinct Tertiary European pangolin genus Necromanis. Most of the nodes on the MPT receive modest to high bootstrap and branch support values (Fig. 1) and are diagnosed by a large number of unambiguous and unique synapomorphies (Appendix 4). Although a close relationship between Palaeanodonta and Pholidota is assumed based on the work of previous authors (Emry 1970; Storch 2003; Rose et al. 2005), the analysis provides support for the monophyly of Palaeanodonta and Pholidota and a large number of anatomical synapomorphies that would support a relationship between the two groups. In addition, the clade including Palaeanodonta and Pholidota is given a new name, the superorder Pholidotamorpha, as a means to resolve longstanding nomenclatural problems regarding this grouping.

The results provide robust support for the monophyly of the extant pangolins in the family Manidae relative to all the extinct taxa, and for the recognition of three distinct genera within Manidae: Manis for the Asian pangolins, Smutsia for the African ground pangolins, and Phataginus for the African tree pangolins (with the last the best supported, and the middle genus least well supported). The results also support monophyly of the two African genera in a subfamily Smutsiinae. Although the consensus tree fails to resolve the relationships of the important extinct European taxon Necromanis, the youngest of the extinct pangolin genera, it does support an alliance between the late Eocene Asian taxon Cryptomanis and the latest Eocene North American taxon Patriomanis into a single family Patriomanidae. Furthermore, it provides strong support for the monophyly of a clade including Necromanis, Patriomanidae, and Manidae exclusive of the middle Eocene pangolins from the Messel deposit in Germany. Perhaps the most surprising results of the analysis are its lack of support for the monophyly of the genus Eomanis and its inclusion of Eurotamandua within Pholidota. The monophyly of Pholidota itself receives modest bootstrap and branch support, but the clade is diagnosed by surprisingly few synapomorphies, although this may be largely an artifact of the incomplete nature of the basal taxa, particularly Euromanis krebsi.

Because the preferred phylogeny differs from previous taxonomic arrangements of Pholidota, a systematic revision of the group is offered. This revision recognizes a superorder Pholidotamorpha containing two orders, Pholidota and Palaeanodonta. Within Pholidota, a suborder Eupholidota containing two superfamilies is recognized: Eomanoidea, a group made monotypic by restricting its contents to the species Eomanis waldi; and Manoidea, which contains two families: Patriomanidae, a group whose content has varied in previous treatments but includes two genera in our revision, Patriomanis, and Cryptomanis; and Manidae, which includes all extant taxa as well as three Plio-Pleistocene fossil species. The European Tertiary form Necromanis is also included in Manoidea, though its family level affinities are unresolved. Eurotamandua is formally included in Pholidota, and a third Messel “edentate,” “Eomaniskrebsi, is moved to its own newly diagnosed genus, Euromanis.

The biogeographic implications of the preferred phylogeny are discussed. The present study strongly corroborates previous suggestions that the Pholidota has its origin on the Laurasian continents, most likely in Europe. This is consistent with both the fossil record for pangolins, their likely sister-group relationship to the Laurasian Palaeanodonta, and with molecular studies of eutherian phylogeny that link Pholidota to Carnivora and other Laurasian clades. The recognition of distinct African and Asian clades of modern pangolins would be consistent with several biogeographic hypotheses of origin. However, the fossil record seems to imply a Laurasian origin of the modern taxa, with dispersal first into Africa, and subsequently into Asia. However, the depauperate nature of the fossil record for pangolins makes such a conclusion tentative at present.

Comparison of the phylogenetic results of this analysis with and without fossil taxa (Fig. 1 vs. Fig. 13) shows the importance of extinct taxa for resolving systematic relationships within the order. Thus, although the results of the present study provide a much clearer resolution for the systematic and biogeographic problems associated with this order than previous work, we cannot help but feel that there is much more to learn about the evolutionary history of this group. The discovery of more, and more complete, fossil taxa, would be invaluable in improving our understanding of pangolin phylogenetic and biogeographic history. Additionally, a comprehensive molecular phylogenetic study on modern pangolins has yet to be conducted. Pangolins are not well represented in zoos and museum collections worldwide, and tend to live at low population densities predominantly in remote forested regions of tropical Africa and Asia. Therefore, obtaining fresh tissue samples for sequence analysis presents particular difficulties. However, such an analysis could provide a critical test for the phylogenetic hypotheses offered in the present study. We hope that ultimately, this study may provide impetus for others to join the search for new fossils or for new molecular data on this group, and that we can improve our understanding of this fascinating, bizarre, highly specialized branch of the mammalian evolutionary tree.