Abstract
Host/guest interactions in the cyclophane-2/benzene system have been investigated by absorption and fluorescence spectroscopy in dichloromethane. The cyclophane serves as a host and the benzene as a guest. Absorption and fluorescence titration experiments are carried out by holding either the concentration of the host or guest constant while varying the concentration of the other component. When the concentration of benzene is kept constant, an isostilbic point at 288 nm is observed in the fluorescence spectral data, suggesting that only two absorbing species are present in equilibrium. Keeping the concentration of cyclophane-2 constant while increasing the concentration of benzene results in a hyposchromic shift of the emission peaks in the range 275–360 nm. The shift is attributed to interaction of the cyclophane with benzene. The average association constant of cyclophane-2 with benzene, K a = 425 ± 54 M−1, obtains from fitting the absorption and the fluorescence spectral data to the Bourson et al. equation using non-linear regression analysis.
Similar content being viewed by others
Avoid common mistakes on your manuscript.
Introduction
The design, synthesis [1–8], and molecular modeling [9–13] of new cyclophane molecules with selectivity for neutral guest molecules is of continuing interest to a variety of scientists. Specifically, cyclophanes that exhibit neutral molecular binding ability for aromatic compounds [3–6, 14–16] are a rapidly emerging branch of supramolecular chemistry [17]. These molecules are important because of their potential for application in biochemical [18], medicinal [19], and environmental [20] fields. They may provide insight into understanding host/guest interactions in the environment.
Few studies of the binding of benzene to cyclophane molecules exist. Studies of their complexation with benzene reported to date include works by Saigo [7], Diederich [12], and Kaifer’s [21] research groups. Structures of previously studied cyclophanes (hosts) for reported cyclophane–benzene complexes are shown in Fig. 1. Novel cyclophane molecules (Fig. 2) have been synthesized from a relatively unexplored bisphenol, a π electron-rich hydrophobic unit. These molecules—a new class of cyclophanes—are able to form complexes with aromatic guests within a walled enclosure, hence are referred to as “corrals” by their finders [4]. Herein the cyclophane host molecules are referred to as corrals in compliance with the original nomenclature. The corral molecules in this class have different cavity sizes. Varying the number of methylene spacers from two to six results in varying the cavity size of the cyclophanes. The investigated corral-2 herein refers to a corral with two methylene spacers (Fig. 2), i.e., the smallest cavity size. In early studies we reported the molecular association of corral-5/anthracene and corral-5/9-fluorenone host/guest systems in dichloromethane [16]. Our results revealed that the binding of anthracene guest by corral-5 is entropically-driven and thermodynamically favored over that for 9-fluorenone guest.
This paper reports the association constant of benzene with a newly synthesized corral molecule—corral-2—in dichloromethane (DCM) studied by absorption and fluorescence spectroscopy. The host/guest complexation of corral-2/benzene system is investigated: Corral-2 serves as the host and benzene as the guest (Fig. 2). Molecular recognition studies of benzene by corral-2 were investigated as benchmark since benzene is the smallest and simplest aromatic hydrocarbon. Corral-2/naphthalene complexation studies were not successful due to lack of favorable spectral ranges. The absorption spectra of corral-2 and naphthalene overlap extensively. And corral-2/anthracene complexation studies did not show any significant variation of either spectral intensity or maximum wavelength for both absorption and fluorescence titrations experiments upon complexation. Thus, there was no significant data for determining the association constants of the corral-2/naphthalene and corral-2/anthracene complexes.
Experimental
Spectrophotometric grade DCM and benzene were purchased from Aldrich and used as received. Corral-2 was synthesized by the reported method [4]. Stock solutions in DCM were prepared: 5 × 10−5 M for corral-2 and 2 × 10−2 M for benzene. Absorbances of the prepared stock solution and several diluted samples were measured using a Shimadzu UV–Vis spectrophotometer (model UV-2101 PC). Several stock solutions (2.5 × 10−4 to 1 × 10−3 M) of benzene were also prepared. These solutions were then combined (1:1, by volume, that is 5 mL + 5 mL in a 10-mL volumetric flask) with a constant concentration of corral-2. The absorption spectrum was collected a few minutes following each addition. Variation of host’s absorption intensity—in the region of 275–300 nm where benzene does not absorb—was monitored as a function of the benzene concentration in DCM at ambient temperature (Fig. 3). The final concentration of the host molecule was held constant (2.5 × 10−5 M) for the UV–Vis absorption experiments, while the final concentration of benzene was varied from 0 to 1 × 10−3 M.
Fluorescence spectra were measured with a Shimadzu RF-5301 PC spectrofluorometer. Two types of experiments were conducted for the fluorescence titrations. First, the concentration of benzene was held constant at 2.5 × 10−4 M while that of corral-2 was varied from 5 × 10−6 M to 5 × 10−5 M (Fig. 4). Second, the concentration of corral-2 was held constant at 2.5 × 10−5 M and changes in the emission of corral-2 upon addition of benzene from 0 to 4 × 10−3 M were monitored (Fig. 5). All solutions were excited at 255 nm.
Determination of the association constants for the corral-2/benzene
Bourson et al. equation [22] (Eq. 1) was derived by assuming that the stoichiometry of the molecular recognition complex is 1:1,
where I = intensity of the complex, I 0 = initial intensity of the substance that is held constant (either corral-2 or benzene, in this study), C 0 = concentration of the substance that is held constant, C x = concentration of the substance that is varied, and K a = the association constant of the host/guest complex. The association constant was determined by plotting the intensity of the complex, I, at a selected wavelength as a function of the concentration of the substance that is varied, C x (Figs. 6, 7). Absorption and emission spectral data were fit to equation (1) using Origin 7.5 software. Satisfactory fits were obtained (R 2 = 0.99) in all cases. These results support the assumption of 1:1 complexation between corral-2 and benzene.
Results and discussion
Absorption titrations
Corral-2 was held at a constant concentration of 2.5 × 10−5 M while the concentration of benzene was varied. Changes in the absorption spectrum of corral-2 were monitored in the region where free benzene does not absorb—275–300 nm. As shown in Fig. 3, the absorbance of corral-2 increased as a function of the concentration of benzene. This observation suggests that corral-2 interacts with benzene; it was used to determine the association constant.
For data analysis, wavelengths were chosen where corral-2 absorbs but benzene does not, and where the variations of the absorbance of the complex as a function of the concentration of benzene were largest. The association of corral-2 with benzene in DCM was assessed by non-linear curve fitting of the absorption spectral data using Origin 7.5. A fit to the Bourson et al. equation [22] of absorption spectral data at 284 nm (Fig. 6) yields an association constant of 506 ± 10 M−1.
Fluorescence titrations
When the concentration of benzene was held constant, the emission intensity of free benzene at the wavelength maximum of 280 nm decreased as corral-2 was added and the signal attributed to complexed benzene at λmax = 296 nm increased (Fig. 4). Observation of an isostilbic point at 288 nm suggests the presence of only two absorbing species in equilibrium, in agreement with 1:1 complexation between the corral-2 and benzene.
Alternatively, when the concentration of corral-2 was held constant the emission intensity of corral-2 increased as more and more benzene was added, and the maximum intensity peak was blue shifted, a hypsochromic shift. The emission spectrum due to free corral-2 has a λmax at 304 nm (Fig. 5). The blue shift to higher energy or lower wavelength suggests a direct relationship between the concentration of benzene and its capability to donate π-electrons to the corral-2 upon complexation.
Fitting of the fluorescence spectral data at 280 nm for the constant benzene concentration to the Bourson et al. equation produced a negative slope, whereas the fit at 296 nm resulted in a positive slope (Fig. 7). The negative slope fit corresponds to the decreasing fluorescence intensity signal of the free benzene at 280 nm and the positive slope fit is attributed to the increasing bound-benzene emission intensity at 296 nm as a function of the increasing concentration of corral-2. As expected, both fits yielded an identical association constant, K a, of 400 ± 30 M-1 as shown in Table 1. The fit of the fluorescence titration data at constant concentration of corral-2 yielded K a = 395 ± 20 M−1, which is in agreement with the value determined at the constant concentration of benzene. The fluorescence spectral data analysis at 340 nm was selected for the constant concentration of corral-2 titrations because free benzene does not fluoresce at 340 nm, and spectral changes in emission intensity as a function of benzene are largest (Fig. 5).
Summary of the association studies of cyclophane/benzene system
Absorption and fluorescence titration experiments were conducted for measuring the association constant of benzene with corral-2. The obtained average association constant for the corral-2/benzene complex is 425 ± 54 M−1 in DCM. Reported association constants for other cyclophane/benzene complexes are 18 and 102 M−1, for the host 1 4+/benzene [21] and cyclophane 1/benzene [12], respectively. The association constant of Saigo et al. [7] cyclophane/benzene complex was not reported. Thus it appears that the corral-2/benzene complex has the strongest host/guest interaction. However, direct comparison of the association constants is not possible because the measurements were taken in different solvents (Table 2) and the host molecules have different charges—corral-2 is neutral, cyclophane 1 has a net charge of +2 and host-14+ has a net charge of +4 (Fig. 1).
Molecular modeling
Molecular modeling was performed with PCModel 9.1 [23]. Molecular mechanics geometry optimization of the corral-2, benzene, and corral-2/benzene complex were carried out using the MMX force field. The docking option (auto dock) in PCModel was employed to find the best interaction geometry between corral-2 and benzene. The lowest energy conformation of the complex obtained from docking computations is shown in Fig. 8. Complexation of the guest molecule within the π-electron rich cavity of the host species is clearly evident.
Conclusion
We have measured an average association constant for the corral-2/benzene complex of 425 ± 54 M-1 in DCM at room temperature from absorption and fluorescence titration experiments. Observation of an isostilbic point at 288 nm in the emission spectral data reveals that a 1:1 complex between corral-2 and benzene has been formed. Molecular modeling suggests that the benzene molecule is intercalated in the cavity of corral-2. We are currently attempting to grow crystals of the corral-2/benzene complex for structural analysis by X-ray diffraction. Corral-2 may potentially serve as a sensor for benzene. Future studies of the selective binding of benzene to corral-2 in a mixture of benzene with toluene and xylenes may yield further useful results for the development of chemical sensors.
Abbreviations
- DCM:
-
Dichloromethane
References
Shibahara, M., Watanabe, M., Iwanaga, T., Ideta, K., Shinmyozu, T.: Synthesis, structure, and transannular π–π interaction of multilayered [3.3]metacyclophanes. J. Org. Chem. 72, 2865–2877 (2007)
Bartsch, R.A., Kus, P., Dalley, N.K., Kou, X.: A novel cyclophane–anthracene complex. Tetrahedron Lett. 43, 5017–5019 (2002)
Stetson, C.M., Nishikawa, S., Purkiss, D.W., Dalley, N.K., Bartsch, R.A.: Synthesis and evaluation of new ditopic cyclophane receptors for benzoic acid. J. Phys. Org. Chem. 18, 1107–1115 (2005)
Dalley, K.N., Kou, X., Bartsch, R.A., Kus, P.: Synthesis of new cyclophane host molecules and crystal structures of their compounds with hydrocarbon guests. J. Incl. Phenom. Macrocycl. Chem. 45, 139–148 (2003)
Dalley, K.N., Kou, X., Bartsch, R.A., Kus, P.: Synthesis of a new cyclophane host and crystal structures of its compounds with neutral guests. J. Incl. Phenom. Mol. Recogn. Chem. 29, 323–334 (1997)
Diederich, F.: Cyclophanes for complexing neutral molecules. Ang. Chem. 100, 372–396 (1988)
Saigo, K., Kubo, M., Lin, R., Youda, A., Hasegawa, M.: Synthesis and complexation of a novel cyclophane. Tetrahedron Lett. 26, 1325–1328 (1985)
Haeg, M.E., Whitlock, B.J., Whitlock, H.W. Jr.: Anthraquinone-based cyclophane hosts: synthesis and complexation studies. J. Am. Chem. Soc. 111, 692–696 (1989)
Denti, T.Z., Mordasini van Gunsteren, W.F., Diederich, F.: Computer simulations of the solvent dependence of apolar association strength: Gibbs free energy calculations on a cyclophane-pyrene complex in water and chloroform. J. Am. Chem. Soc. 118, 6044–6051 (1996)
Kind, C., Reiher, M., Roder, J., Hess, B.A.: A quantum chemical study on the stability of [3n]-allenophanes (n = 2−4). Phys. Chem. Chem. Phys. 2, 2205–2210 (2000)
Chang, C.E., Gilson, M.K.: Free energy, entropy, and induced fit in host-guest recognition: calculations with the second-generation mining minima algorithm. J. Am. Chem. Soc. 126, 13156–13164 (2004)
Jorgensen, W.L., Nguyen, T.B., Sanford, E.M., Chao, I., Houk, K.N., Diederich, F.: Enhanced view of structure and binding for cyclophane–arene complexes through joint theoretical and experimental study. J. Am. Chem. Soc. 114, 4003–4004 (1992)
Turker, L.: The tautomeric forms of a cyclophane system and some of their spectral properties: a theoretical study. Theochem 636, 133–141 (2003)
Ferguson, S.B., Seward, E.M., Diederich, F., Sanford, E.M., Chou, A., Inocencio-Szweda, P., Knobler, C.B.: Strong enthalpically driven complexation of neutral benzene guests in aqueous solution. J. Org. Chem. 53, 5593–5595 (1988)
Kunsagi-Mate, S., Szabo, K., Bitter, I., Nagy, G., Kollar, L.: Unexpected effect of charge density of the aromatic guests on the stability of calix[6]arene-phenol host–guest complexes. J. Phys. Chem. 109, 5237–5242 (2005)
O’Brien, M., Smalley, R., Amonge, A., Raber, S., Starosota, A., Buthelezi, T., Bartsch, R.A., Wegiel, M.: Spectroscopic properties of cyclophane/anthracene and cyclophane/9-fluorenone complexes in dichloromethane. Microchem. J. 80, 55–63 (2005)
Steed, J.W., Atwood, J.L.: Supramolecular Chemistry. Wiley, Chichester, New York (2000)
Falahatpisheh, M.H., Kerzee, J.K., Metz, R.P., Donnelly, K.C., Ramos, K.S.: Inducible cytochrome P450 activities in renal glomerular mesangial cells: biochemical basis for antagonistic interactions among nephrocarcinogenic polycyclic aromatic hydrocarbons. J. Carcinogen. 3, (2004)
Sanyal, M.K., Mercan, D., Belanger, K., Santella, R.M.: DNA adducts in human placenta exposed to ambient environment and passive cigarette smoke during pregnancy. Birth Defects Res. A Clin. Mol. Teratol. 79, 289–294 (2007)
Ludwig, R.: Calixarenes in analytical and separation chemistry. Fresenius J. Anal. Chem. 367, 103–128 (2000)
Castro, R., Davidov, P.D., Kumar, K.A., Marchand, A.P., Evanseck, J.D., Kaifer, A.E.: Inclusion complexation of cyclobis (Paraquat P Phenylene) and related cyclophane derivatives with substituted aromatics: cooperative noncovalent cavity and external interactions. J. Phys. Org. Chem. 10, 369–382 (1997)
Bourson, J., Pouget, J., Valeur, B.: Ion-responsive fluorescent compounds. 4. Effect of cation binding on the photophysical properties of a coumarin linked to monoaza- and diaza-crown ethers. J. Phys. Chem. 97, 4552–4557 (1993)
PCModel V9.0, Molecular Modeling Software, Serena Software, Bloomington, IN (2004)
Acknowledgements
This work was financially supported by the NSF-MRI grant-0421228 and the Materials Characterization Center at Western Kentucky University. CD and RG wish to acknowledge the KY NSF-EPSCoR Scholar Program, and the NSF-REU Grant EAR-035361 for support of their research. The research conducted at Texas Tech University was supported by Grant D-0775 from The Welch Foundation.
Author information
Authors and Affiliations
Corresponding author
Rights and permissions
About this article
Cite this article
Davies, C., Ren, L., Gustafson, R. et al. Molecular association of benzene with a new cyclophane receptor. J Incl Phenom Macrocycl Chem 61, 347–352 (2008). https://doi.org/10.1007/s10847-008-9428-2
Received:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s10847-008-9428-2