Abstract
Carcinosarcoma (CS) is an uncommon and clinically aggressive malignancy. The objective of the present study was to characterize the molecular features of CS at various anatomic locations, including serous effusions. Specimens (n = 32) consisted of 25 biopsies/surgical resection specimens and 7 serous effusions (6 peritoneal, 1 pleural) from 25 patients. Fresh-frozen cell pellets and surgical specimens underwent targeted next-generation sequencing covering 50 unique genes. A total of 31 mutations were found in 25 of the 32 tumors studied, of which 1 had 3 mutations, 4 had 2 different mutations, and 20 had a single mutation. The most common mutations were in TP53 (n = 25 in 24 tumors; 1 tumor with 2 different mutations), with less common mutations found in RB1 (n = 2), MET (n = 1), KRAS (n = 1), PTEN (n = 1), and KIT (n = 1). Patient-matched specimens harbored the same TP53 mutation. Tumors with no detected mutations were more common in serous effusion specimens (3/7; 43%) compared with surgical specimens (4/25; 16%). In conclusion, the molecular landscape of CS is dominated by TP53 mutations, reinforcing the observation that the majority of these tumors develop from high-grade serous carcinoma. Whether CS cells in serous effusions differ from their counterparts in solid lesions remains uncertain.
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Introduction
Carcinosarcoma (CS) is an uncommon and clinically aggressive cancer characterized morphologically by biphasic growth, with both epithelial and sarcomatous components present. The sarcomatous component may be homologous (spindle cell) or heterologous, the latter most commonly consisting of skeletal muscle or cartilage. CS is most commonly diagnosed in the uterine corpus, but may have origin in other gynecologic organs, including the adnexal region [1]. A recent study of 82 ovarian CS showed that 79% contained high-grade serous carcinoma (HGSC) elements, while the carcinomatous component was endometrioid in the remaining 21% cases. Patients with CS had significantly poorer response to chemotherapy and shorter survival compared with matched patients with HGSC [2].
Several studies analyzing the molecular characteristics of gynecologic CS have been published in recent years. The majority of these reports included both uterine and ovarian tumors, with the former constituting the majority of cases [3,4,5,6,7]; reviewed in [8], though two more recent studies have analyzed only ovarian CS [9, 10]. Of the latter, one study analyzed both ovarian and extra-ovarian tumors [9], whereas the most recent study focused on the ovarian tumors [10].
Solid CS metastases most frequently, though not exclusively, consist of the carcinomatous component of the tumor. Dissemination of this tumor to serous effusions (peritoneal, pleural, or pericardial), an anatomic site in which detection of metastatic sarcomas is exceedingly rare, is almost exclusively in the form of carcinoma [11]. Whether this special feature has any association with the molecular features of tumor cells remains unclear.
A previous study from our institution [12] analyzed 103 effusion specimens, of which the majority were HGSC. However, mutation analysis focused only on 6 genes (TP53, PIK3CA, KRAS, HRAS, NRAS, and BRAF), and only 1 of the 6 CS effusions analyzed carried TP53 mutation, with no additional findings observed in these tumors. The frequent origin of CS in HGSC suggests that TP53 mutation should be more common, and that other mutations related to the latter tumor may be present. This prompted us to study CS at different anatomic sites, including effusion specimens, using a different, and more comprehensive molecular platform.
Material and methods
Patients and specimens
The study material consisted of a series of 32 specimens, including 25 biopsies/surgical resections and 7 serous effusions (6 peritoneal, 1 pleural) from 25 patients, submitted to the Department of Pathology at the Norwegian Radium Hospital for routine diagnostic purposes during the period 2000–2021. One specimen was available from 21 patients, whereas 4 patients had tumors from several anatomic sites, including 2 patients with 2 tumors, 1 patient with 3 tumors, and 1 patient with 4 tumors.
The majority of CS develop from HGSC, the majority of which have origin in the fallopian tube. As the SEE-FIM (Sectioning and Extensively Examining the Fimbria) procedure, required for assessing whether the tumor originates from the fallopian tube, has not been applied prior to 2014 at our institution, and as the majority of cases predate this year, ovarian specimens are referred to as such, without reference to primary vs. metastatic location, though the latter is assumed for the majority.
Effusions were centrifuged immediately after tapping, and cell pellets were frozen at − 70 °C in equal amounts of RPMI 1640 medium (GIBCO-Invitrogen, Carlsbad, CA) containing 50% fetal calf serum (PAA Laboratories GmbH, Pasching, Austria) and 20% dimethylsulfoxide (Merck KGaA, Darmstadt, Germany). Cellblocks were prepared using the thrombin clot method. Surgical specimens were frozen at − 70 °C without any treatment.
Effusions and surgical specimens were reviewed and diagnosed based on the 2014/2020 WHO criteria by an experienced pathologist with sub-specialty in cytopathology and gynecologic pathology (BD), the former as part of a study of clinicopathologic parameters [13]. For effusions, diagnosis was based on morphology in Diff-Quik-stained and PAP-stained smears, H&E sections from cellblocks, and immunohistochemistry (IHC), the latter consisting of epithelial (PAX8, claudin-4, B72.3) and mesothelial (calretinin) markers. The pre-operative biopsy was additionally assessed in all cases with available material, and the surgical specimen was assessed in patients who received upfront surgery.
Tumor cell content was assessed in both effusions and surgical specimens, the latter by evaluation of frozen sections, with minimum set at 30%. The majority of specimens contained > 50% tumor cells. Frozen sections from the analyzed tissue were additionally assessed for the presence of carcinoma vs. sarcomatous elements.
Clinicopathologic data are presented in Table 1. Chemotherapy data were available for 23 patients, all of whom received platinum-based therapy at diagnosis. Chemoresponse was assessed in 22 patients, of whom 17 had complete response, 3 partial response, 1 stable disease, and 1 progression.
Informed consent was obtained according to national and institutional guidelines. Study approval was given by the Regional Committee for Medical Research Ethics in Norway (REK # S-04300).
Molecular analysis
Effusions were thawed by diluting the cells 1:10 in PBS. The cell pellet was spun down at 1000 rpm for 10 min, and the supernatant was discarded. The cell pellet was then re-suspended in 200 µl of PBS. DNA from effusions and solid tumors were extracted using the NucleoSpin Tissue, Mini kit for DNA from cells and tissue (MACHEREY–NAGEL Düren, Germany).
DNA purity was measured using NanoDrop (Thermo Fisher Scientific, Waltham MA, USA). Median absorbance ratio 260/280 was 1.9 (1.8–2.1), and concentrations were determined with the Qubit fluorometer (Thermo Fisher Scientific). Targeted next-generation sequencing was performed with the Ion GeneStudio S5 system and was analyzed using the Ion AmpliSeq™ Cancer Hotspot Panel v2, covering 50 unique genes. The median coverage of called variants was 1991, enabling detection of variants down to 1% allele frequency. Variants were called, annotated, filtered with Ion Reporter Software V.5.10 (Thermo Fisher Scientific), and manually reassessed using Integrative Genomics Viewer.
This NGS assay does not include copy number variation (CNV) analysis.
Statistical analysis
Statistical analysis was performed applying the SPSS-PC package (Version 29). Probability of < 0.05 was considered statistically significant.
For progression-free survival (PFS), follow-up time was calculated from the date of last chemotherapy treatment at diagnosis until the date of relapse, date of death from any cause, or end of follow-up. For overall survival (OS), follow-up time was calculated from the date of diagnosis until date of death from any cause or end of follow-up, whichever occurred first. Survival curves were plotted with the Kaplan–Meier method. The log-rank test was used to compare survival between the groups.
Results
With the exception of one tumor, the morphology of the epithelial component of the studied CS was of HGSC (Fig. 1A–C), the former tumor having endometrioid features and staining negative for WT1 (Fig. 1D, E).
Due to the abovementioned limitation with respect to the SEE-FIM protocol, tumor origin was not systematically assessed. However, tubal involvement, reinforcing the fact that the majority of these tumors are likely to arise from the fallopian tube, was observed in several cases, of which one had an unequivocal focus with serous tubal intraepithelial carcinoma (STIC; Fig. 1F–H).
Molecular data are summarized in Table 2. A total of 31 mutations were found in 25 of the 32 tumors studied, of which 1 had 3 mutations, 4 had 2 different mutations, and 20 had a single mutation. The most common mutations were in TP53 (n = 25), with less common mutations found in RB1 (n = 2), MET (n = 1), KRAS (n = 1), PTEN (n = 1), and KIT (n = 1). Patient-matched specimens from the 4 patients with multiple lesions carried the same TP53 mutation. Tumors with no detected mutations were more common in serous effusion specimens (3/7; 43%) compared to surgical specimens (4/25; 16%), though the sample size was too small for comparative statistical analysis.
As specified above, tumors negative for all mutations included in the gene panel applied had features of HGSC in the epithelial tumor component (Fig. 2A and B). The same was true for the tumor harboring both TP53 and KRAS mutation (Fig. 2C, D); the tumor harboring only KIT mutation (Fig. 2E–G); and the tumor harboring TP53, RB1, and PTEN mutation (Fig. 2H, I).
The tumor with endometrioid morphology in the epithelial component had no molecular alterations.
In order to further investigate p53 status in the studied material, tumors were immunostained for p53 protein using a recently described protocol [14]. As patient-matched tumors carried identical TP53 mutations, only one lesion from each patient was stained in the 4 cases with > 1 specimen. Nineteen tumors had aberrant staining pattern (15 diffusely positive, 3 with negative/null pattern, 1 with combined diffusely positive and cytoplasmic pattern) and 6 tumors stained with wild-type pattern (Fig. 3). Among tumors with wild-type p53 by IHC, 3 had no TP53 mutations and 3 harbored mutations. Among the 19 tumors with aberrant staining pattern, NGS identified TP53 mutations in 14 cases.
With the exception of one patient who died of other cancer, all patients in this study died of CS. For these 24 patients, PFS ranged from 0 to 77 months (mean = 18, median = 15), whereas OS ranged from 6 to 144 months (mean = 48, median = 31). The number of patients was deemed insufficient for robust analysis. However, an attempt was nevertheless made to see whether tumors with no mutations were associated with markedly different survival than their mutated counterparts. No significant differences were found between these two groups (p = 0.614 for OS; p = 0.663 for PFS; data not shown).
Discussion
Adnexal CS have been consistently referred to as “ovarian” in previous publications, but their frequent origin in HGSC suggests that many are in fact of tubal origin, a fact which was clearly evident in the present study despite inadequate sampling of the fallopian tube. The first author of this study has seen several tumors with the morphology of HGSC in the fallopian tube that acquired the sarcomatous component in the ovarian metastasis, as was the case in the tumor shown in Fig. 1F–1H in the present study. Given this, these tumors should be referred to as tubo-ovarian rather than ovarian, in the same manner that adnexal carcinomas are. Finally, the predominance of HGSC as the epithelial component of adnexal CS is well in agreement with previous studies [2, 9]. It is also in agreement with recent reports assigning the majority of uterine CS to the copy number high/TP53 mutated group using the TCGA classification algorithm [15, 16].
With a postulated origin in the fallopian tube for the majority of tumors in our study, they should be perceived to consist predominantly of metastatic CS, as is likely the case with many of the ovarian tumors studied by other groups. Studies of extra-adnexal metastases from adnexal CS are nevertheless to date limited to a single study of surgical specimens [9], in which 18 ovarian and 12 extra-ovarian tumors were studied, and to a previous study of serous effusions from our hospital [12]. Given the high metastatic propensity and clinical aggressiveness of this cancer, the need to expand our knowledge in this area is evident.
As expected in a tumor originating primarily from HGSC, TP53 was the most commonly mutated gene, and similar TP53 mutation was found in patient-matched specimens from different anatomic locations, attesting to the central role of this molecular event in the biology of CS. This is in agreement with the previous above-mentioned of adnexal CS [9, 10], though the percentage of tumors with no detectable TP53 mutation is somewhat higher in the present series. In this relatively small series, mutations were more common in surgical specimens compared to effusions. TP53 mutations were nevertheless found in 3/7 effusions compared to 1/6 in the previous study of serous effusions, possibly owing to technical differences in the assays used. Technical factors need also be considered with respect to tumors with unequivocal HGSC morphology in the epithelial component that did not harbor mutation in this gene. Nevertheless, differences in p53 protein content among HGSC with different TP53 mutations have been observed in analysis of public databases, including the TCGA cohort [17]. In another study of HGSC, discordant results were observed in analysis of TP53 mutation status and p53 protein expression by IHC [18]. Finally, tumors with the morphological features of HGSC that have wild-type p53 staining pattern and/or lack TP53 mutations have been described [19]. This suggests that both gene and protein status should be analyzed in selected cases, as recently recommended for adnexal HGSC [20].
Other genetic changes were uncommon in this series. The finding of infrequent mutations in RB1, KRAS, and PTEN is well in agreement with data from the Ho series, in which KRAS mutation and amplification was found in 4/18 tumors, RB1 deletion in 2/18 tumors, and PTEN mutation in 2/18 cases tumors [9]. Mutations in these genes have also been reported in studies combining uterine and adnexal tumors [3, 4, 6].
We additionally found mutations in MET and KIT in 1 case each, which to the best of our knowledge have not been reported in tubo-ovarian CS, the former in a case harboring TP53 mutation, the latter as single finding. MET mutation was found in 2/76 tumors in a study of endometrial CS, whereas KIT and/or PDGFRA mutations were found in 5 tumors in the same study [21], and our findings are thus comparable in terms of frequency.
Assessment of the prognostic role of the detected mutations in our series is limited by its size. We nevertheless did not observe any difference between women diagnosed with tumors harboring mutation compared to those with no detected ones. The same was true upon looking specifically at long-term survivals with OS > 100 months, or those with very poor survival (OS ≤ 24 months). Conclusive assessment of this issue requires larger studies.
In conclusion, analysis of mutation profiles in CS at different anatomic locations, the majority metastatic, shows predominance of TP53 mutations, in agreement with the frequent detection of HGSC histology in the epithelial component of this tumor. We additionally report novel mutations in MET and KIT in tubo-ovarian CS. Whether metastasis to the serosal cavities in the form of effusion selects for non-mutated tumors awaits larger studies, though this does not appear to be associated with better outcome.
Data Availability
Data is avaialable upon reasonable request. Queries should be addressed to one of the corresponding authors.
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Funding
Open access funding provided by University of Oslo (incl Oslo University Hospital). This study was supported by a kind donation from the family and friends of Anne Kristine Hustad Kleven to the investigators through the Cancer Foundation at the Norwegian Radium Hospital (Radiumhospitalets Legater).
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BD designed the study, diagnosed the tumors, performed the statistical analysis, and wrote the manuscript. AH participated in the laboratory work and critically read the manuscript. KL and AGZE provided clinical data and critically read the manuscript. TAN and AT performed the molecular analysis, interpreted the results, and critically read the manuscript.
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Study approval was given by the Regional Committee for Medical Research Ethics in Norway (S-04300).
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Davidson, B., Holth, A., Lindemann, K. et al. Molecular characteristics of tubo-ovarian carcinosarcoma at different anatomic locations. Virchows Arch (2024). https://doi.org/10.1007/s00428-024-03821-9
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DOI: https://doi.org/10.1007/s00428-024-03821-9