Abstract
Main conclusion
Mechanosensitive channels are integral membrane proteins that rapidly translate extrinsic or intrinsic mechanical tensions into biological responses. They can serve as potential candidates for developing smart-resilient crops with efficient root systems.
Abstract
Mechanosensitive (MS) calcium channels are molecular switches for mechanoperception and signal transduction in all living organisms. Although tremendous progress has been made in understanding mechanoperception and signal transduction in bacteria and animals, this remains largely unknown in plants. However, identification and validation of MS channels such as Mid1-complementing activity channels (MCAs), mechanosensitive-like channels (MSLs), and Piezo channels (PIEZO) has been the most significant discovery in plant mechanobiology, providing novel insights into plant mechanoperception. This review summarizes recent advances in root mechanobiology, focusing on MS channels and their related signaling players, such as calcium ions (Ca2+), reactive oxygen species (ROS), and phytohormones. Despite significant advances in understanding the role of Ca2+ signaling in root biology, little is known about the involvement of MS channel-driven Ca2+ and ROS signaling. Additionally, the hotspots connecting the upstream and downstream signaling of MS channels remain unclear. In light of this, we discuss the present knowledge of MS channels in root biology and their role in root developmental and adaptive traits. We also provide a model highlighting upstream (cell wall sensors) and downstream signaling players, viz., Ca2+, ROS, and hormones, connected with MS channels. Furthermore, we highlighted the importance of emerging signaling molecules, such as nitric oxide (NO), hydrogen sulfide (H2S), and neurotransmitters (NTs), and their association with root mechanoperception. Finally, we conclude with future directions and knowledge gaps that warrant further research to decipher the complexity of root mechanosensing.
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Introduction
Plant growth and productivity are significantly influenced by root development and the overall health of the root system. Due to their dynamic phenotypic plasticity, roots offer a variety of benefits to plants, including anchoring, mineral, and water intake, as well as the ability to respond biotic and abiotic stresses (El Amrani 2023). The most striking feature of plant root system is their ability to communicate and influence beneficial microbiota which provides an array of beneficial traits to plants in terms of growth promotion and stress adaptability (Bao et al. 2014; Koevoets et al. 2016; Ryan et al. 2016; Anten and Chen 2021). Therefore, maintaining crop yields in the face of climate change and increased population growth necessitates the creation of robust root systems with flexible root system architecture (RSA). In nature, roots are very often exposed to a wide range of mechanical stressors, such as wind, rain, snow, sound, touch, insects, soil particles or stones, drought, salinity and flooding which have a significant impact on their growth and development traits (Moulia et al. 2011; Jin et al. 2013; Yuan et al. 2014; Hartmann et al. 2021; Mousavi et al. 2021; Yoshimura et al. 2021; Guichard et al. 2022). These mechanical stimuli causes short-term biochemical changes such as calcium burst, ROS wave formation, hormone synthesis, and pH modifications that regulates root architecture, developmental, and adaptive responses (Ghosh et al. 2016; Rodrigo-Moreno et al. 2017; Khait et al. 2023). For instance, root thigmomorphogenesis is the most visible morphological effect of mechanostimuli in roots (Chehab et al. 2009; Bidzinski et al. 2014). Similarly, positive gravitropism and touch stimuli can also influence a variety of root development patterns on the agar surface, including waving, skewing, helixing, and circumnutation (Monshausen and Gilroy 2009a; Silverberg et al. 2012; Zha et al. 2016). On the other hand, when root tips face soil obstructions, they avoid them by shifting the direction of their growth. Previous studies have shown that sound treatment significantly enhances root length, root vigor, and fresh weight in Dendranthema morifolium. According to Li et al. (2020), wind exposure increased the dry mass of tomato roots by about 34.63%. Interestingly, it was found the roots of Zea mays grow toward the vibrations caused by moving water (Gagliano et al. 2017). Therefore, these studies further support the notion that roots have evolved a complex sensing mechanism to perceive these mechanical cues and translate them into biochemical responses to drive changes in their growth direction (tropism) and RSA (Monshausen and Gilory 2009b). Another important biochemical modification triggered by mechanical stress is auxin repartition and cell development due to the auxin efflux carrier PINFORMED1 (PIN1), which can alter its abundance at the plasma membrane (PM) and intracellular localizations (Landrein et al. 2015). Previous studies have also shown that mechanical stimuli also affects the structure of microtubules (Liu et al. 2015; Ganguly et al. 2020). In addition, mechanical forces exerted above the ground can also be transmitted intrinsically to the soil, which in turn exerts reaction forces on the roots (Hartmann et al. 2021). Even without external mechanical factors, roots are also mechanically stressed by intrinsic turgor pressures and during cell division (Monshausen and Haswell 2013; Weber et al. 2015). These stress patterns can be predicted based on tissue stage, shape, and anisotropic growth: longitudinal versus transverse stress in different plant species. Nevertheless, many studies have reported that the reorientation of microtubules regulates mechanics-driven morphogenesis in plants in response to mechanical stress (Hejnowicz et al. 2000; Hamant et al. 2008; Robinson and Kuhlemeier 2018). These asymmetric stress patterns act as adaptive responses to control posture and mechanical disturbances in plants (Almeras and Fournier 2009). In these cases, MS ion channels serve as adaptable sensors that respond to intrinsic (osmotic pressure) or extrinsic mechanical stimuli (touch, sound, gravity, and water) that allow ions to flow from one side of the membrane to the other side along its electrochemical gradient (Martinac 2012; Peyronnet et al. 2014; Ranade et al. 2015). These mechanically gated ion channels are pore-forming transmembrane proteins that are ubiquitously distributed in both eukaryotic and prokaryotic cell membranes and open in response to the mechanical stage of the cell wall (Kloda and Martinac 2002; Pivetti et al. 2003; Haswell et al. 2011). In plants, during mechanical stress, such as osmotic pressure, touch, gravity, and pathogenic invasion, MS channels enable the transmembrane transfer of a monoatomic ion by altering the conformation of the protein and switching the multimeric complex from a non-conducting (closed) to a conducting (open) state (Basu and Haswell 2017; Guichard et al. 2022). However, the precise mechanism of gating MS channels remains unknown.
The first MS channel to be cloned was a bacterial MscL (MS channel large conductance) (Sukharev et al. 1994), followed by a mammalian MS channel (Patel et al. 1998). Since then, numerous MS channels have been identified in various taxa, owing to the availability of whole-genome sequencing and contemporary technologies. The patch-clamp electrophysiology technique was initially used to define the first MS channel activity in plant membranes shortly after being identified in animal cells (Haswell 2007). To date, five families of MS channels have been identified based on their subcellular localization and ionic preferences: MscS-like (MSL) proteins (Haswell et al. 2008; Maksaev and Haswell 2012); Mid1-complementing activity (MCA) proteins (Nakagawa et al. 2007; Furuichi et al. 2012); reduced hyperosmolality-induced [Ca2+]i increase (OSCA) channels (Yuan et al. 2014), Piezo channels (Mousavi et al. 2021), and Two-Pore Domain Potassium (TPK) channels (Maathuis 2011), respectively. They differ in their structure, which is mainly based on their transmembrane segment: MCA has a single transmembrane segment, MSL (heptamers), OSCA (pentamers), Piezo (trimers), and TPK (dimers) (Wilson et al. 2013; Saotome et al. 2018; Maity et al. 2019). However, to date, only three complex MS membrane stretch-activated channel families (MSL, MCA, and TPK1) have been fully characterized because of their overlapping localization (plasma membrane, tonoplast, mitochondrial matrix, and plastid stroma), structural diversity, ion selectivity, and biological functions in the plant system (Nakagawa et al. 2007; Haswell et al. 2008; Martinac et al. 2014; Ranade et al. 2015; Basu and Haswell 2017). A detailed list of MS ion channels that differ based on ion selectivity, biochemical properties, localization, and biological roles in plant systems is shown in Table 1.
Homologs of plant MS channels are also found in other organisms such as fungi, bacteria, archaea, protists, and animals, except for MCA, mainly found in plants. The roles of different MS channels are well-documented in animals, yeast, and bacteria, where they perform crucial functions in regulating different traits. In plants they are involved in various developmental processes, including pollen tube growth (MSL8), chloroplast organization (MSC1), cell wall damage (MCA), biotic/abiotic stresses (MSL1/4; MCA1/2), cell division (MSL2/3), reproductive stages (MSL1-6), and lateral root emergence (Haswell and Meyerowitz 2006; Nakayama et al. 2007; Hamilton et al. 2015; Saddhe and Kumar 2015; Zhang et al. 2017; Lee et al. 2019). However, few studies have demonstrated the role of MS ion channels during mechanical stress in different plant tissues (Hartmann et al. 2021). For example, MSL8 has a mechanosensory function in pollen (Hamilton et al. 2015), MSL10 functions as a sensor for cell swelling (Basu and Haswell 20172020), OSCA1 plays a role in osmosensation (Yuan et al. 2014), and OSCA1.3 controls stomatal closure during pathogen attacks (Thor et al. 2020). Denness et al. (2011) validated an MCA mutant in Arabidopsis and reported that MCA was required for root penetration on solid agar and responded to cellulose inhibition. The PIEZO ion channel has recently been identified as an important player in root mechanotransduction in A. thaliana (Mousavi et al. 2021). This study demonstrated that the main inhibition of root growth was observed in mutant PIEZO lines, as well as a reduction in their ability to penetrate hard agar. Additionally, they stated that PIEZO 1 was expressed in the root tip's columella and lateral root cap cells when exposed to significant mechanical stress during root growth or stress (Mousavi et al. 2021). Haswell et al. (2008) reported two MSL channels (MSL9 and MSL 10) in root cells required for mechanostimulation. Similarly, MSL9 and MSL10 show mechanosensitive activity in root protoplasts and cell signaling (Peyronnet et al. 2008; Basu et al. 2020). According to another study, OSCA1 plays a crucial role in calcium transients and is involved in root osmosensing (Yuan et al. 2014). These studies have provided novel insights into the role of MS channels in roots. However, despite the availability of high-throughput techniques, how they sense and become activated in response to different mechanical stimuli remains largely unknown (Bello-Bello et al. 2022).
Two models have been proposed and are widely recognized in animal systems: the force-from-lipid mechanism (Martinac et al. 1990; Teng et al. 2015), in which MS channels act as direct mechanosensors of tension in the lipid bilayer without requiring any external components, and the force-from-filament mechanism (Chalfie 2009; Katta et al. 2015), in which the extracellular matrix and/or cytoskeleton act as mediators of the force that pulls the MS channels open. However, in plants, two computational models were designed based on in vivo experiments to unravel the complexity of plant organ structures in response to mechanical and biochemical cues (Marconi and Wabnik 2021). Lockhart (1965) first described the mechanohydraulic cell growth equation or water uptake and cell wall mechanics, stating that the single-cell expansion rate is a function of the cell volume, cell wall extensibility, turgor pressure, and threshold. A mechanohydraulic model in a multicellular context was recently proposed to reconcile the previous assumptions (Long et al. 2020). The force-derived lipid mechanism of MS channels (Piezo1, OSCA1.2, MCA2, and MSLs) was initially studied in bacterial and mammalian systems (Martinac et al. 1990; Kung 2005; Teng et al. 2015; Cox et al. 2016; Syeda et al. 2016; Murthy et al. 2018; Yoshimura et al. 2021; Li et al. 2020). However, the future challenge is to map forces at the cellular level to understand which conditions and locations MS channels are activated. MS ion channels have been documented in all three domains (eukaryotes, eubacteria, and archaebacteria), suggesting they appeared early during evolution (Martinac and Kloda 2003). However, there is a significant knowledge gap regarding their function in plant growth and stress responses. There are few reports that have highlighted the role of different MS channels like MCA, MSL, OSCAs, Piezo in plants but there upstream and downstream signaling cascades remains largely unknown. Hence, integrating genetic, molecular, and electrophysiological techniques could provide fascinating insights into the role of MS channels, from mechanical perception to organismal behavior. In this review, we discuss the role of mechanopriming in root biology. Next, we focused on the adaptive role of root MS channels. Furthermore, we provide insights into their signal perception cascades, such as cell wall-mediated activation, and mechanotransduction players, such as Ca2+, ROS, hormones, NO, H2S, and NTs, highlighting knowledge gaps. Finally, we provide an update on root thigmomorphogenesis, cell wall compartments, and downstream signaling cascades in response to mechanical stimuli in root biology.
Mechano priming in plants opens new avenues for crop improvement
Mechano priming has become one of the most promising method for improving plant growth and stress adaptability in sustainable agriculture. In plants, mechanopriming induces transcriptional, translational and metabolic changes that improve their growth and stress adaptability. For instance, Ca2+ and ROS burst, activation of hormonal signaling pathways and antioxidant enzyme activity and cytoskeleton reorganization are some of the key events that occurs in plants after mechanopriming (Ghosh et al. 2021). Over the last decade, several studies have shown that regular mechanical priming can significantly improve plant stress resilience and fitness. For example, mechanical treatment of the aerial parts of sunflowers and Sitka spruce leads to modifications in their RSA and biomechanical properties, thus forming roots that are stronger and more resilient to bending (Stokes et al. 1997; Goodman and Ennos 1998). Iida (2014) reported that mechanical treatment of wheat and barley seedlings enhanced growth-related traits, such as root growth, longer spikes, improved tillers, reduced lodging, and higher yield. A previous study showed that touch stimulation in the root triggers directional growth responses essential for avoiding obstacles and navigating a stimulus-heavy soil environment (Weerasinghe et al. 2009). Similarly, wind stimulation affects the adaptive propagation of the root system and the restructuring of root growth patterns in various plant species (Coutand et al. 2008; Nam et al. 2020). Another study of mechanical perturbations in young Sitka spruce clones showed enhanced root growth traits and tolerance to bending (Stokes et al. 1997). Similarly, various studies have revealed biochemical and molecular changes in roots after mechanostimulation. For instance, touch treatment in Arabidopsis promoted extracellular ATP release in the root and shoot and identified the key regulator, namely the heterotrimeric G-protein complex (Weerasinghe et al. 2009). According to Scott and Allen (1999), mechanical stimulation of Arabidopsis roots results in a transient and local increase in intracellular Ca2+. On the other hand, it has been found that physical impedance in maize roots leads to a high accumulation of ethylene (ET) in roots, which is associated with aerenchyma formation (Sarquis et al. 1991; He et al. 1996). Another study showed that mechanopriming increases cold tolerance in tomato plants by modulating different biochemical and morphological traits (Keller and Steffen 1995). Intriguingly, it was observed that touch priming in Zea mays leaves produces volatile signals that triggers chemical defense in non-prime plants (Markovic et al. 2019). According to Chehab et al. (2012), bending of Arabidopsis plants exhibit higher jasmonic acid (JA)-dependent disease resistance against the fungus Botrytis cinerea and the herbivore Trichoplusia ni, respectively. On the other hand, touch stimuli in Arabidopsis plants improves resistance to fungal pathogens (Benikhlef et al. 2013).
Similarly, SV (sound vibration) priming has been reported to improve root growth in paddy rice and Actinidia chinensis (Bochu et al. 2003; Yang 2004). Previous research has demonstrated that during drought stress, SV priming shifts the direction of root development toward water (Gagliano et al. 2012, 2017). Furthermore, we have summarized the role of mechanopriming in stress resilience (Table 2 and Fig. 1). Overall, these studies provide concrete evidence of the impact of mechanopriming on root traits. However, how roots sense mechanical stimuli and translate mechanical signals into biochemical responses remains largely unknown. Therefore, it is necessary to conduct additional research to identify the molecular players that may function as sensors and transducers during root mechanosensing; this will help us better understand the molecular mechanism of mechanopriming and contribute to the development of future mechano-based smart, resilient crops that have significant agronomic value.
Adaptive role of MS channels in root biology
Abiotic stressors such as drought, salinity, heavy metals, and flooding significantly affects root development and its functional attributes ultimately causing plant mortality (Ali et al. 2022; Aslam et al. 2022; Chen et al. 2022; Niu et al. 2022; Tyagi et al. 2023a, b). For instance, salt and drought impair root growth by causing nutrient and water imbalances, which ultimately result in osmotic and hydraulic failure (Van Zelm et al. 2020; Li et al. 2021). Similarly, flooding also affects roots by inhibiting gas diffusion which triggers hypoxia and alters metabolic functioning and energy production (Martínez-Alcántara et al. 2012). In plants, mechanosensitive ion channels are the primary candidates that can perceive diverse environmental cues and mediate growth and adaptive responses. For example, MCA1 and MCA2 can sense osmotic stress by regulating Ca2+ influx and exhibit sensory potentiation and involvement of plastidial potassium exchange antiporters (KEA) such as KEA1/2 and KEA3 in A. thaliana (Stephan et al. 2016). Previous studies have shown that overexpression of MCA1 increases Ca2+ accumulation and tolerance to hyperosmotic stress (Nakagawa et al. 2007). MCA1 is also known to play a significant role in the penetration of roots into tougher surfaces; as a result, it can shield roots from the mechanical pressure of hard soil particles. Similarly, MCA1 and MCA2 have been implicated in chilling and freezing tolerance and a transient increase in [Ca2+]cyt in Arabidopsis in response to cold shock. Similarly, the mca1/ mca2 double mutant was more sensitive to cold stress and showed a lower increase in [Ca2+]cyt when exposed to cold than the wild-type (Mori et al. 2018). In contrast, osca1 mutant lines display impaired Ca2+ levels and root growth under hyperosmotic stress, supporting the notion that OSCA1 is a critical osmosensor in Arabidopsis (Hou et al. 2014). OSCA1.1 is involved in sensing hydrotropism via Ca2+ influx, followed by the MIZU-KUSSEI 1 (MIZ1)-mediated signaling pathway (Akita and Miyazawa 2022). Similarly, MSL calcium channels have been reported to play key roles in plant adaptation to various stressors. For instance, MSL2 and MSL3 respond to osmotic stress (Wilson et al. 2011; Lee et al. 2019). The msl2 msl3 double mutant has short roots and a small number of lateral roots (Lee et al. 2019). Similarly, MSL8 is crucial for plant survival under osmotic stress (Hamilton et al. 2015). Recent research has demonstrated that the Arabidopsis PIEZO1 gene is necessary for root penetration and that pzo1 mutants have poor primary root growth under tougher conditions (Mousavi et al. 2021). Two pore channel 1 (TPC1), another important voltage- and ligand-gated cation channel, plays a significant role in calcium-mediated communication from the root to shoot, critical for plant development and adaptive responses (Ghosh et al. 2022). Furthermore, we have summarized the adaptive role of MS calcium channels in the roots (Table 3) and (Fig. 2). However, further research is needed to fully examine the potential of various MS channels in root adaptability, which will open new possibilities for creating robust smart crops based on root engineering.
Cell wall compartment—a new paradigm of MS channels activation in root biology
Plant cell walls offers a variety of functions in plants, including supporting their structural integrity, aiding in growth and development, and improving stress adaptability (Houston et al. 2016). It functions as a primary signaling hub that initiates a variety of signaling cascades linked to development and stress response, as well as also acts as first line of defense against various stressors (Rui and Dinneny 2020). Similarly, cell wall compartment is viewed as a key regulatory platform for mechanosignal transduction in response to different mechanical cues like touch, wind, bending and sound. However, unlike other stressors the role of cell wall in plant mechanosensing is not fully understood. Plant cells must constantly perceive and respond to changes in cell wall mechanics during stress and normal growth and development to survive (Rui and Dinneny 2020). One of the effects of losing the structural support of the cell wall is loss to plasma membrane integrity, which may lead to cell bursting and death (Feng et al. 2018). It is now well-documented that cells transmit mechanical stimulation into biochemical responses and use it as a driving force for activating different biological functions. This further supports the notion that plants like other organisms may have evolved unique mechano sensors to perceive different mechanostimuli. For instance, two group of sensors that are involved in mechanosensing in plants are MS channels and cell wall receptor-like kinases (Shi et al. 2014). So far, different MS ion channels (MCA1, MSL, PIEZO) have been identified in plants to serve as promising plant mechanosensors. However, the upstream elements involved in MS channel activation remain largely unknown. Second, the mechanism by which different mechanostimuli activate the MS channels is not fully understood. However, recent studies have highlighted the role of cell wall components (both chemicals and proteins), such as peptides, oligosaccharides (OGs), and receptor-like kinases (RLKs), and cellular conditions, such as apoplastic pH and ROS, in regulating the activity of MS channels (Bacete et al. 2022; Darwish et al. 2023). It is believed that plant cell wall integrity (CWI) sensors are essential for detecting mechanical signals in plants under stress and driving diverse cellular and adaptive responses through MS channel activation.
In plants, CWI sensors continuously monitor the mechanical integrity of walls and have become one of the most interesting fields in plant mechanobiology. In plants, the most studied CWI sensors that have been well belong to the RLK family. Numerous CWI sensors have been identified in plants, including wall-associated kinases (WAKs), leucine-rich repeat receptor-like kinases (LRR-RLKs), Catharanthus roseus receptor-like kinase1-like (CrRLK1L) subfamily like FERONIA, THESEUS, leucine-rich repeat extensins (LRXs), and glycosylphosphatidylinositol-anchored (GPI)-anchored proteins, which play key roles in sensing abiotic, biotic, and mechanical stressors. The roles of various CWI sensors in response to different stressors or root traits have been studied in root biology. For instance, RALF34/THESEUS1 plays an important role in fine-tuning lateral root initiation (Gonneau et al. 2018). Similarly, RALF1-FERONIA activation distinctly regulated root developmental traits. It negatively regulates primary root growth and promotes root hair growth. Under high-sugar conditions, cellulose synthesis and anisotropic cell growth in the roots depend on two LRR-RLKs, FEI1 and FEI2 (Xu et al. 2008). Another important CWI sensor is arabinogalactan proteins (AGPs), such as salt overly sensitive 5 (SOS5), which play an important role in root development during salinity stress (Shi et al. 2003). Among the LRX-type CWI sensors, LRX1 and LRX2 are mainly associated with root hair growth and play a vital role in vacuolar mechanosensing (Dünser et al. 2019). However, little is known about how CWI sensors affect MS channels and various downstream signaling cascades that affect both root development and adaptation traits. Recent research on THESEUS1 suggests that it may regulate MCA1 channel activity, which is downstream of THESEUS1 and is implicated in lignification and hormone synthesis in response to isoxaben treatment, which prevents cellulose synthesis (Engelsdorf et al. 2018). Similarly, another study showed that MSL6 is phosphorylated by wall-associated kinase 1 (WAK1, another important CWI sensor) when it binds to oligogalacturonides (Kohorn et al. 2016). In root mechanosensing, FERONIA has been reported as a key regulator of calcium signaling during touch response (Shi et al. 2014). These studies highlight the role of CWI sensors or RLKs in the mechanosensing and regulation of the MS channel. Therefore, future research should focus on deciphering how cell wall reprogramming can activate CWI sensors (RLKs) and different MS channels, such as MCA, MSL, OSCA, and PIEZO, in roots under different environmental and mechanical stressors, which could provide novel insights into root mechanobiology. MS channels play an important roles in adaptive root responses to various abiotic and mechanical stressors. Therefore, identifying the upstream players that modulate or regulate MS channels and their downstream signaling cascades (calcium, ROS, and hormones) will open up new possibilities for crop improvement by employing new root traits. Furthermore, we propose a model that shows the importance of cell wall sensors and their signaling events in modulating MS channels (Fig. 3).
Downstream signaling cascades linked to MS channels in roots
Although the molecular mechanism underlying the perception of a mechanical stimulus remains unknown, the rapid calcium burst during mechanostimulation (touch and wind) has emphasized the importance of Ca2+ MS channels in plant mechanobiology. MS channels are predicted to be the most adaptable plasma membrane-based sensors that enable plants to detect various mechanical stimuli (Ridone et al. 2019). However, the upstream and downstream signaling pathways associated with MS channel activation remain largely unknown. Some important findings have emerged in the last decade on how MS channels transport calcium and other signaling molecules (ROS and anions), which are known to regulate diverse signaling cascades. The structural, metabolic, and signaling features of plants depends on the calcium as a macronutrient and secondary messenger (Marschner 2012). For nutritional traits (structural and metabolic) plants involve passive Ca2+ route via ion channels and relies on the operation of constitutive Ca2+ influx channels. In contrast, plants evolve rapid and transient ion channel-mediated calcium flow via cytosolic Ca2+ [Ca2+]cyt., referred to as a Ca2+ signal. Ca2+ is transported orchestratively across cell membranes by Ca2+-permeable ion channels, Ca2+-ATPases, and Ca2+/H+ exchangers, enabling Ca2+ physiological functions. This signal is crucial for translating internal and external inputs into physiological and gene expression responses by decoding them (Demidchik and Shabala 2018; Aslam et al. 2022). For instance, in different plants, MS channels such as MCA1, MCA2 (Nakagawa et al. 2007; Kurusu et al. 2012; Mori et al. 2018), OSCA (Yuan et al. 2014; Thor et al. 2020), PIEZO (Mousavi et al. 2021; Radin et al. 2021), and MSL10 (Basu and Haswell 2020) are known to stimulate Ca2+ transients, whereas MSL10 and MCA1 promote ROS production as a subsequent outcome of the activation of Ca2+ signaling (Kurusu et al. 2012; Basu and Haswell 2020). In roots, calcium burst regulate an array of signaling cascades driven by ROS, apoplastic and cytoplasmic pH, hormones, and other emerging signaling molecules such as NO. For example, calcium transients lead to the activation of the auxin and ethylene pathways, which are involved in the modulation of the root response to mechanical impedance (Masle 2002; Braam 2005; Okamoto et al. 2008; Yamamoto et al. 2008; Lee et al. 2020). The activation of calcium signaling also plays an important role in auxin-triggered primary root development. Recent studies have shown the involvement of Ca2+ signaling in auxin transport via PIN2 to mediate root bending (Lee et al. 2020). Previous studies have reported that when roots are mechanically restricted, their morphology frequently resembles that of roots exposed to ethylene, with the inhibition of root growth and an increase in the number of root hairs (Masle 2002; Buer et al. 2003). Another study revealed that mechanically induced root bending could promote the growth of lateral roots, accompanied by a local increase in Ca2+ levels and an asymmetric redistribution of auxin to the site of emergence. Ethylene and auxin signaling may serve as a significant downstream targets after Ca2+ signaling activation by MS channels in roots during mechanical stimuli which could regulate diverse traits of RSA. Hence, deciphering the relationship between MS channel-regulating ethylene and auxin-mediated signaling would offer new perspectives on root mechanism perception. Many studies have identified various genes crucial for decoding calcium-mediated downstream signaling in plants. For example, touch-responsive genes (TCH) are downstream components of the touch response that are tightly related to the initial Ca2+ signal (Braam et al. 1997). Previous studies have shown that mechanoperception in roots results in transcriptional reprogramming, which is primarily related to the initial Ca2+ induction, further highlighting the role of calcium in mechanoperception (Kimbrough et al. 2004; Lee et al. 2005; Monshausen and Gilroy 2009b; Zhang et al. 2020). ROS, a universal secondary messenger that regulates various cellular, developmental, and adaptive responses (Mohammadi et al. 2021; Ali et al. 2023) is another significant downstream signaling component of MS calcium channels. It is well-documented that plants under stress triggers the formation of ROS wave which leads to the activation of systemic signaling, however, its role in mechano systemic signaling remains enigmatic. Therefore, it is important to point out how mechanical signals triggers ROS wave in roots and how it activates systemic signaling in above ground organs. Recent study using various molecular and biochemical analyses have demonstrated the importance of ROS-mediated root development in response to mechanical impedance (Jacobsen et al. 2021). This study further showed that integration of ROS, ethylene, and auxin signaling cascades are crucial to mechano triggered root growth modifications. Ca2+ signaling is necessary for ROS generation in response to mechanical stimuli (Monshausen et al. 2009). The complexity of calcium- and ROS-driven signaling in root mechanosensing calls for further research and the determination of the MS channel that drives positive calcium and ROS interactions. It will be interesting to explore whether MS channels have distinctive calcium and ROS signaling patterns in response to various root mechanostimuli and how they regulate different root hormonal signatures, such as auxin and ethylene. Recently, the discovery of the H2O2 receptor (HPCA1) in plants has shown that ROS can activate calcium channels in guard cells, opening new directions for calcium and ROS signal transduction (Wu et al. 2020). It would be interesting to explore the role of H2O2, NO, and other emerging signaling pathways in root mechanosensing and how MS calcium channels modulate them during mechanostimulation or vice versa. Furthermore, we summarized the downstream signaling cascades that are directly or indirectly linked to MS channels in root biology (Fig. 4).
Emerging signaling molecules in root mechanosignal transduction.
Stress driven signals in roots cause modifications in xylem hydraulics, mobile peptides, ROS, Ca2+ and hormones which causes change in their structure as well as in areal parts. Similarly, root mechanosensing also involves an array of signaling players and molecules such as cell wall sensors, MS channels, calcium, ROS, and hormones which determines the overall fate of mechanosignal transduction. However, in addition to calcium, ROS, and hormones, other signaling molecules like NO, H2S, and neurotransmitters have emerged crucial regulators of root mechanosignal transduction. For instance, NO is widely considered an important signaling molecule that regulates different root developmental and adaptive traits. Previous studies have shown that NO concentration and the nature of the stress either promote or inhibit root growth (Correa-Aragunde et al. 2004; Manoli et al. 2014). Similarly, NO has been reported to play important role in Arabidopsis following mechanostimulation. However, the mechanisms by which MS channel activation regulates NO synthesis and feedback regulation in plants remain unclear. In animals, NO biosynthesis is regulated by Ca2+ and its sensors, such as calmodulin (CaM). Therefore, it would be interesting to explore how mechanostimulation triggers calcium waves and how their sensors can regulate NO homeostasis, which can modulate different root and shoot development and plant stress responses. On the other hand, the role of ROS and NO cross talk in regulating root mechanosignal transduction warrants future investigation. As, ROS is key for the formation and function of NO in plants. Numerous studies have shown how NO and ROS can control a variety of plant responses, including leaf senescence, seed dormancy, nutrition homeostasis, hypersensitive responses (PCD), plant immunity, and stress responses (Kapoor et al. 2023; Kaya et al. 2023). Therefore, it will be interesting to find out how mechanostimuli triggered ROS influence NO production and how it regulates root traits as this would provide new light on root mechanobiology. In root developmental biology, ROS, NO and hormones (like auxin, ethylene) are crucial for the development of primary, lateral, adventitious root (AR), and root hair (Chen et al. 2012; Lombardo and Lamattina 2012). Future research on root mechanobiology will, therefore, also need to consider how mechanical stimuli alter these signaling signatures and their effect on above root traits.
Similar to NO, H2S is another emerging signaling molecule in root mechanobiology as it regulates an array of plant developmental and adaptive responses, either individually or in combination with other signaling molecules. Recent studies have shown that H2S promotes lateral and adventitious root formation but inhibits root hair (Li et al. 2022). As mechanical stress also regulates root developmental traits, it would be interesting to examine the role of H2S in root mechanosensing and signal transduction. Further studies should focus on the crosstalk between NO and H2S during root mechanical stress and how it affects root traits. Plant neurotransmitters such as melatonin, serotonin, acetylcholine, dopamine, and GABA have also become important signaling players in plant biology owing to their multifaceted functions in plant development and stress resilience (Akula and Mukherjee 2020; Arnao and Hernández-Ruiz 2021). NTs have emerged as new players in root biology that control various morphological, developmental, and adaptive root features (Guidotti et al. 2013; Ramesh et al. 2015; Duan et al. 2022). Numerous studies have shown that NTs control a range of root signaling molecules, including calcium, reactive oxygen species (ROS), nitric oxide (NO), and hormones. However, its role in the root mechanobiology remains unclear. Therefore, exploring how MS channel-triggered signaling can activate or regulate NTs will be interesting, providing new directions for the connection between neurotransmitters and plant mechanobiology. In addition, how these emerging signaling molecules interact with root signature hormones, such as auxin (AUX), ethylene, ABA, and brassinosteroid (BR), during mechanostimulation needs further attention. Furthermore, we summarized the overall events of MS-mediated signal perception and transduction in plant roots (Fig. 4).
Filling the gap between MS channel perception and signal transduction
Despite significant structural and mechanical differences, MS channels are conserved in animal and plant cells with similar properties (Peyronnet et al. 2014). Over the past 10 years, significant advancements have been made in our understanding of membrane calcium transport. Most Ca2+-permeable channels have been studied electrophysiologically and cloned into heterologous expression platforms in animal systems. However, despite the availability of high-throughput tools, the functions of MS channels in plants remain largely unknown and have not been structurally confirmed. For example, (1) how are MS channels activated in the roots after perceiving mechanical cues? (2) How do MS channels selectively perceive individual or multi-root mechanostimuli? (3) How do they trigger downstream signaling cascades that result in root morphological, developmental, and adaptive responses? (4) How do MS channels sense abiotic stressors triggered by mechanostimuli, and do they differ from other mechanostimuli? (5) How do MS channels affect RSA in different crop systems? Do they have similar effects, or may they vary at the individual level? (6) How do MS channels affect the root architecture under different stresses? (7) Do root MS channels play a role in long-distance signaling? The scientific community can fill the knowledge gap between MS channel signal perception and transduction by addressing these important questions. In this regard, future studies should focus on some of the important themes that are linked to root MS channels involving various signaling events, such as cell wall sensors, NADPH oxidase, H+-ATPase, hormones, NO, H2S, NTs, and intracellular organelle signaling. These players play crucial role in regulating different plant developmental and adaptive responses against biotic and abiotic stresses (Ashraf and Aslam 2022). Recent studies have reported that mechanostimulation triggers the expression of cell wall-related genes, transcription factors, kinases, and phytohormones which are associated with calcium signaling activation (Darwish et al. 2023). On the other hand, the expression of NTs such as acetylserotonin methyltransferase (ASMT), G-protein-coupled receptor 1 (GCR1), acetylcholine (ACT), and dopamine beta-monooxygenase (DOMON) was found to be induced after exposure to 500 Hz SV frequency at 30 min time interval in Arabidopsis (Tyagi et al. 2023b). Therefore, more in depth studies are required to further underpin the role of hidden signaling players that are regulated by MS channels in plants. Furthermore, how MS channels participate in intracellular organelle root signaling, triggering epigenetic modifications, needs future investigation. In this regard, various molecular, biochemical, and physical tools, such as multi-omics, genetic studies using knockout mutants and genome editing, whole-cell and excised patch-clamp electrophysiology, live-cell imaging, indirect analysis, and mathematical modeling, are required to study the role of these players in MS channel perception and signal transduction (Fig. 5). Nevertheless, these tools have been instrumental in underpinning the intricacy of MS channel-triggered signaling in animals hence translating them into plant root mechanobiology will open new directions in how roots sense and translate mechanical cues into biochemical responses. Recent advances in plant MS channel research have revealed that MS channels regulate different root phenotypic traits. In this regard, a high-throughput phenotyping platform, deep learning, and computer vision will help thoroughly study root growth or RSA related to MS channel activity in different crops.
Root thigmomorphogenesis in response to mechanical stress
Plant morphogenesis is a complex and ubiquitous response comprising many interacting elements, including mechanical stress, biochemical signaling, and genetic conditions (Marconi and Wabnik 2021). In addition to the internal mechanical forces driven by organogenesis, external stresses are unpredictable and dangerous sources of permutation. These various manifestations of growth acclimation to mechanical permutations are called thigmomorphogenesis (Jaffe 1973). Among these, root thigmomorphogenesis is the most visible morphological effect of mechanostimuli in roots. Various studies have reported that mechanism-driven morphogenesis involves microtubule reorientation in response to mechanical stress (Hejnowicz et al. 2000; Hamant et al. 2008; Robinson and Kuhlemeier 2018). For example, during transient bending, wind, mechanical obstacles, and severe water stress, formation of the lateral root, increase in root biomass, change in root architecture (waving), reduced height growth, and increased diameter growth were reported to improve anchorage in Arabidopsis, Plantago major, Ulmus americana, and Prunus avium (Stokes et al. 1997; Telewski and Pruyn 1998; Coutand et al. 2008; Ditengou et al. 2008; Richter et al. 2009; Anten et al. 2010; Paul-Victor and Rowe 2011; Schoelynck et al. 2015; Zhdanov et al. 2021; Zhang et al. 2022). However, complex signaling cascades are known to play important roles in modulating the mechanical properties of cell walls during root thigmomorphogenesis, including Ca2+ signaling, pH modulation, polar auxin transport, microtubular function, and gravitropism (Monshausen et al. 2009; Bidzinski et al. 2014; Nam et al. 2020). Sometimes, responses can also occur far away from stimuli that are mechanically coupled (by either hydraulic or electrical signals), known as long-distance signaling, mainly due to hormone transport (Moulia et al. 2011; Lopez et al. 2014; Louf et al. 2017). For example, long-distance signaling has been observed in Arabidopsis after mechanical stress by rapidly synthesizing jasmonates that enhance plant growth and pest resistance (Chauvin et al. 2013). Similarly, tomato plants show reduced height when manually bent at the basal part of the stem (Coutand et al. 2000). Expression of the JAZ5 gene, encoding the jasmonate ZIM domain protein, was observed as a long-distance signal after exposing poplar plants to local flame wounding on the stem, which alters stem elongation and stimulates apices (Tixier et al. 2014). Therefore, plants respond to mechanical stress in many different ways, depending on the stress’s type, intensity, and duration.
Mechanosensing and mechanotransduction pathways have previously been described as an important driver for the root and shoot growth. The perception of mechanical stress by plants is a rapid process that triggers the quick conversion of mechanical signals into biological signals with the aid of two major candidates/sensors: (i) RLKs and (ii) MS ion channels (Bacete and Hamann 2020; Frachisse et al. 2020). Previously, only one Ca2+-permeable MS channel, MCA1, was reportedly involved in root thigmomorphogenesis (Nakagawa et al. 2007). Other channels like, AtOSCA1.1, attenuates water transpiration and root growth in response to osmotic stress, whereas maize ZmOSCA2.4 is also involved in drought tolerance in transgenic Arabidopsis (Yuan et al. 2014; Cao et al. 2020). Recently, MILDEW LOCUS O (MLO) genes were shown to play important roles in Arabidopsis root thigmomorphogenesis and encode Ca2+ channels (Bidzinski et al. 2014; Gao et al. 2023). Similarly, Procko et al. (2021) reported the involvement of MSL and OSCA in triggering touch-sensitive hair in the Venus flytrap (Dionaea muscipula). In addition, OsHOS1, an E3-ubiquitin ligase, has been reported to be an important mechanosensing regulator of root thigmomorphogenesis (root-curling phenotype) in rice (Lourenço et al. 2015). Several recent studies have reported the potential role of AtPIEZO (mainly present in the root cap) in Arabidopsis mechanosensing root growth in response to substrate impedance (Fang et al. 2021; Mousavi et al. 2021). However, Radin et al. (2021) reported that PpPIEZO 1 and 2 are localized in the tonoplast of the moss (Physcomitrium patens). Nevertheless, these downstream signaling players stretch the plasma membrane; hence, further research is required to understand the initial signaling cascades that perceive and translate mechanical signals into biochemical responses, which will offer new insights into the mechanisms underlying root thigmomorphogenesis. Among the RLK1 family members, FERONIA is known to play a role in developmental responses and hormonal signaling when exposed to mechanical stimuli, such as root nutation, root gravitropism, and roots encountering an impenetrable barrier (glass or hard agar medium) (Shih et al. 2014; Dong et al. 2019; Li et al. 2020). Functional validation using fer mutants has also shown impaired ion signaling, reduced MS gene expression, and altered root growth when exposed to touch or bending (Shih et al. 2014). However, despite the diversity of mechanically induced channels and cell wall receptors, their functions and distinct signaling pathways potentially activated by specific mechanical stresses have not yet been explored.
In addition to external mechanical stimuli, roots face mechanical strain during cell division and other growth traits that must be sensed to survive. For example, lateral roots emerge mainly due to the mechanical stress exerted from the inside. Nevertheless, roots respond to mechanical pressure in a complicated manner involving biological and physical mechanisms. The physical body deforms under mechanical stress. For instance, when an axially oriented force is applied, an elastic rod may buckle or thicken in response to compression while becoming thinner in stretching (Potocka and Szymanowska-Pulka 2018; Smithers et al., 2019). In mechanics, a physical body subjected to mechanical stress can be either elastic (reversible to its original form) or plastic (nonreversible) (Meyers and Chawla 2008). According to Niklas (1992), plants and their tissues exhibit characteristics of all three types of materials but are not entirely plastic, elastic, or viscous. Despite their physical structure, roots operate as living plant organs because they can perceive environmental changes and initiate various adaptive processes. However, the mechanism by which they sense and respond to mechanical stressors is not fully understood. Generally, growing root tips in their natural habitat, soil, come into contact with an array of impediments and soil particles that cause mechanical strain in some situations, may experience displacement and morphological changes, and in others, may inhibit further growth. The root cap is the primary part exposed to environmental stressors and can sense these cues to maintain root growth and adaptive responses.
Interestingly, the root cap plays an important role in root biology by acting as a barrier between the soil and growing root, directing root growth, and minimizing friction between the soil and root (secreting mucilage) (Bengough and McKenzie 1997). Previous studies have also demonstrated that mechanical stress in roots has a significant impact on aboveground plant parts, such as retarded shoot growth (Potocka and Szymanowska-Pulka 2018), altered leaf growth and morphology, decreased leaf number (Grzesiak 2009), area (Kobaissi et al. 2013), and elongation rates (Young et al. 1997), as well as stomatal closure (Roberts et al. 2002). However, the question remains about how the root caps sense mechanical cues and translate them into biochemical responses that modulate different root traits.
Many studies have highlighted how roots undergo developmental changes under abiotic stress, and various key elements that regulate root developmental and adaptive responses have been identified. In other words, the roots frequently adapt to their surroundings and exhibit significant developmental plasticity. For example, under drought stress, roots show a parsimonious root architecture (Lynch 2013, 2018) with fewer lateral/axial roots that grow deeper and move toward greater water availability (Zhan et al. 2015; Dinneny 2019; Gandullo et al. 2021). In contrast, roots show positive hydrotropism, suggesting they bend toward water-rich areas that greatly influence drought tolerance and RSA (Dietrich et al. 2017; Dinneny 2019). During positive root hydrotropism, abscisic acid (ABA) was found to be a key player in regulating an array of signaling events in roots toward hydrotropism (Dinneny 2019). Another drought avoidance strategy is controlling lateral root emergence under drought conditions using hydro patterning and xerobranching. Many important downstream signaling players such as ABA, auxin, MIZU KUSSEI1 (MIZ1), subclass III Snf1-related kinases (SnRK2s), AUXIN RESPONSE FACTOR 7 (ARF7), IAA3 (indole-3-acetic acid), DEEPER ROOTING 1 (DRO1), and the quantitative trait locus for SOIL SURFACE ROOTING 1 have been identified in regulate different root traits during drought stress.
In contrast, halotropism is a noticeable response of the primary root, affecting the root architecture in saline soils. A previous study has shown that negative halotropism (root bending away from salty environments) is the most adaptable strategy for avoiding salinity stress (van Zelm et al. 2020). Auxin and its regulatory signaling cascades are the main players driving halotropism responses in roots during salinity stress (van den Berg et al. 2016). Recent research has highlighted the significance of root hair growth and development under drought and salt stress, in addition to the adjustment of primary and lateral roots. These include EXPB7 (He et al. 2015), WOX11 (Cheng et al. 2016), GLABRA2 (Wang et al. 2020), Triptychon (TRY) (Leng et al. 2021) and salt-overly sensitive (SOS) TFs (Wang et al. 2008) have been shown to positively or negatively regulate root hair growth during drought and salinity stress. Plant roots undergo dramatic morphological changes in response to flooding to survive. Recently, the Hydraulic Conductivity of Root 1 (HCR1), a Raf-like MAPKKK pathway, has been identified as a major player in improving crop flood resilience (Shahzad et al. 2016). These studies provide novel insights into root biology and the signaling cascades that drive growth and adaptation responses to abiotic stressors.
Similarly, mechanical stimuli, such as bending and barrier contact, showed significant changes in ROS, ethylene, and auxin signaling pathways, which were functionally validated using ethylene-insensitive mutants, PIN mutants, pharmacological assays, and image analysis (Lee et al. 2020; Jacobsen et al. 2021). However, recent studies have shown that plant roots also experience mechanical strain during abiotic stressors, including drought, salinity, and flooding, which have a significant impact on its development and functions. Therefore, it is necessary to study the combined effect and tissue-specific expression patterns of mechanical and abiotic stressors on roots using single-cell RNA-seq methods and to develop a model that can shed light on how these two external stressors govern root traits, which will offer new possibilities for crop development in sustainable agriculture.
Conclusion and future perspectives
Plants have evolved a sophisticated mechanism to perceive environmental cues to maximize their growth and survival. Like other biotic and abiotic stressors, mechanical forces generated by turgor pressure, cellular growth and environmental factors such as touch, wind, rain, and sound also influence plant development and their adaptive responses. Despite the existence of high-throughput techniques, the molecular basis of plant mechanoperception and signal transduction remains largely unknown. Interestingly, root mechanobiology has become one of the most important areas for plant scientists to unravel the molecular complexity of plant mechanoperception and signal transduction. So far, two major classes of molecular players like RLKs and MS channels have been identified in root mechanoperception. However, their precise role in response to different root mechano stimuli has not been fully understood. The MS calcium channels are molecular switches used to perceive and transmit mechanical signals. Although MS calcium channels are extensively studied in other organisms, such as bacteria, yeast, and animals, their functions in plant mechanosensing are not entirely understood. Over the last 10 years, plant biologists have shown a real renaissance of interest in unraveling how inner and outer mechanical strains affect the RSA. Numerous studies have shown that mechanopriming and mechanical stress modify root development and adaptive traits. However, the molecular mechanisms underlying the effect of mechanical strain on the RSA remain largely unknown. Additionally, root thigmomorphogenesis is the most obvious morphological result of mechanostimuli (Bello-Bello et al. 2022); however, little is known about the role MS channels, and the other signaling cascades involved in it. Additionally, several questions remain unanswered and await discovery regarding how these channels are involved in root mechanosignal transduction, root development, systemic signaling (from root to shoot), root–microbe interaction, and root–biotic and abiotic–stress interactions. Therefore, future multidisciplinary research including plant physiology, functional genomics, live-cell imaging, bioinformatic analysis, and other high-throughput tools are required to decipher the role of MS channels in root mechanobiology which will pave the way for developing future smart crops. This review provides a perspective on MS channels and their important roles in root mechanosensing. However, to better understand the complex nature of mechanosignal perception and transduction, it is necessary to determine the primary targets (upstream and downstream) of MS channels as well as their molecular functional dynamics. In conclusion, owing to their multifaceted roles, MS channels such as MCA, MSL, OSCA, and PIEZO can be prime candidates for the development of future smart resilient crops with improved root systems.
Data availability
Not applicable.
Abbreviations
- CWI:
-
Cell wall integrity
- LRX:
-
Leucine-rich repeat extensin
- MCAs:
-
Mid1-complementing activity channels
- MS:
-
Mechanosensitive
- MSLs:
-
Mechanosensitive-like channels
- NO:
-
Nitric oxide
- NTs:
-
Neurotransmitters
- OSCA:
-
Reduced hyperosmolality-induced Ca2+ increase
- PIEZO:
-
Piezo channels
- RLK:
-
Receptor-like kinase
- ROS:
-
Reactive oxygen species
- RSA:
-
Root system architecture
- TPK:
-
Two-pore domain potassium
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This work was supported by the National Research Foundation of Korea (NRF) grant funded by the Korea government (MSIP) (NRF-2021R1F1A1060414).
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Tyagi, A., Ali, S., Park, S. et al. Deciphering the role of mechanosensitive channels in plant root biology: perception, signaling, and adaptive responses. Planta 258, 105 (2023). https://doi.org/10.1007/s00425-023-04261-6
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DOI: https://doi.org/10.1007/s00425-023-04261-6