Abstract
Antimicrobial resistance is an alarming problem, especially due to emergence of methicillin-resistance Staphylococcus aureus (MRSA). World Health Organization (WHO) has already listed MRSA as a top priority pathogen for the development of novel antibacterial agents. Presently, different therapeutic approaches against bacterial infections are in practice which includes targeting bacterial virulence factors, bacteriophage therapy, and manipulation of the microbiome. Natural products have been efficiently used for centuries to combat bacterial infections. Morchella is a natural fungal product which has been reported to possess broad-spectrum biological activities against bacterial infections. Hence, this study was aimed to evaluate the antibacterial efficacy of two macro-fungi against S. aureus, MRSA, and Streptococcus pyogenes (S. pyogenes). The antibacterial potential of both fungal extracts (Morchella esculenta and Morchella conica) was evaluated using disk diffusion and standard broth microdilution methods. The chemical compounds of both fungi were investigated using ultra-performance liquid chromatography mass spectroscopy (UPLC–MS) analysis. All fungal extracts inhibited growth of tested bacteria with inhibitory zone ranging from 10.66 ± 0.3 to 21.00 ± 1.5 mm. The minimum inhibitory concentration (MIC) of tested bacterial growth ranged from 03.33 to 16.0 mg/ml. It was noteworthy that Morchella extracts prevented S. aureus growth in a bactericidal manner with minimal bactericidal concentration (MBC) of 8–16 mg/ml. The extracts were also more effective against MRSA than currently available antibiotics. In conclusion, the growth inhibition of tested bacteria by fungal extracts revealed their potential as antibacterial agents and their compounds may be used as drug candidates.
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Introduction
Antimicrobial resistance has become an emerging problem for human health and it has now reached a crises stage worldwide. The emergence of bacterial resistance against conventional antibiotics is also slowing the development of novel therapeutic options by the pharmaceutical industries (Hauser et al. 2016). Thus, two main problems are associated with the increased rate of infectious diseases caused by resistant bacteria. First, increase in resistance to new antibiotics. Second, the gap between new drug development and increasing antimicrobial resistance is growing (Ferri et al. 2017). As conventional antibiotics become increasingly unreliable, therefore, alternative therapeutic options are getting more attention. Most of the currently available antibiotics are either naturally derived or modified drugs (Gil-Gil et al. 2019; Xu et al. 2019). Thus, screening of fungal extracts for the presence of bioactive compounds and antibacterial potential is important in the current era of antimicrobial resistance.
Gram-positive cocci (Staphylococci and Streptococci) are responsible for both community- and hospital-associated infections (Pfaller et al. 2018). Staphylococcus aureus (S. aureus) is the major Gram-positive bacteria in clinical setup and the causative agent of a broad range of illnesses running from skin infection to life-threatening pneumonia and bacteremia (Kanayama et al. 2016; Qin et al. 2020). Streptococcus pyogenes (S. pyogenes) causes a wide range of diseases, e.g., pharyngitis, meningitis, septicemia, pneumonia, erysipelas, Streptococcal toxic shock syndrome (STSS), and necrotizing fasciitis. Glomerulonephritis and acute rheumatic fever are the major post-infection sequelae of S. pyogenes (Imöhl et al. 2017). These bacteria are notorious for the acquisition of numerous antimicrobial resistance which complicates the treatment options. Methicillin-resistance Staphylococcus aureus (MRSA) infection is also continuously emerging especially in healthcare settings (Lee et al. 2018a). The remarkable emergence of MRSA is a special concern and still considered as a superbug in the era of beta-lactam antibiotics (Zhang et al. 2019; Qin et al. 2020). In fact, the world is facing a MRSA crisis which is rapidly spreading among humans causing multiple complications such as gangrene, painful abscesses, cytokine storms, and multiple organs failure (Lowy 1998; Yagnik et al. 2021). WHO gives high priority to MRSA for research, discovery and development of novel antibacterial agents (Organization 2017; Tacconelli et al. 2018). The growing emergence of such resistant organism highlights the clinical demands for further research on development of effective antibacterial agents (Houri et al. 2017).
First- and second-generation cephalosporins, glycopeptides, and penicillin are the most commonly used antibiotics against Gram-positive cocci infections (Kollef 2005; Falagas et al. 2008). The increased incidence of Gram-positive cocci infections has been subjected to a sharp increase in resistance to cephalosporins, penicillin, and glycopeptides (Doern et al. 1999; Smith et al. 1999; Falagas et al. 2008). In addition, the infections caused by resistant Gram-positive cocci can lead to the excess duration of hospital stay, high morbidity, and increased cost of care (Vincent et al. 1995; Niederman 2001). Since last 40 years, the only class of daptomycin and linezolid has been added to the current list of antibiotics. Poor hygiene, lack of infection control systems, and misuse of antibiotics by humans and animal farms have contributed to the antibacterial resistance (Tickell et al. 2020; Yagnik et al. 2021). Most of the currently available antibiotics are discovered from fungi and bacteria (Durand et al. 2019).
Fungi are considered a potential source of therapeutic bioactive compounds, nutrients, and medicinal foodstuff. Due to the presence of bioactive compounds, they are used as antibacterial, antifungal, and antiviral agents since hundreds of years. In the last decade, there was tremendous progress in human medicines, but infectious diseases are still a threat to public health in developing countries (Canli et al. 2019; Atila et al. 2021). About 300,000 natural products had been identified, of which 19,869 natural products are from the fungi kingdom (Chassagne et al. 2019; Mussagy et al. 2019). Specifically, in the Basidiomycota phylum, 4280 natural products have been identified (Vargas-Sinisterra and Ramírez-Castrillón 2021). Since 1981 to 2014, approximately half of the new drugs are derived from natural products, of which 73% of all anticancer compounds and 65% of all antibacterial compounds are derived from fungi (Newman and Cragg 2016; Chassagne et al. 2019). The estimated number of mushrooms species on the earth is 140000 but only 22,000 are described in literature data (Lindequist et al. 2005). There are a large number of fungi and mushroom species not yet investigated for their antibiotic potentials (Hassan et al. 2019). Mushrooms are a great source of bioactive compounds containing phenolics, terpenes, steroids, β-glucans, and nitrogen compounds (De Silva et al. 2013; Zhu et al. 2015). These compounds protect mushrooms against various microorganisms in the soil to survive in their environment (Rai et al. 2015).
Fungal organisms and mushrooms are widely known for their therapeutic values and food products (Volcão et al. 2021). The scientific community investigated wide number of mushroom species to develop novel therapies (Lindequist et al. 2005). Mushrooms possess antioxidant, antibacterial, antifungal, antiparasitic, antiviral, antitumor, antidiabetic, immunomodulating, cardiovascular-protective, radical scavenging, and hepatoprotective effects (Niego et al. 2021). Mushrooms belonging to the genus Morchella are the choicest edible species. Among them, Morchella esculenta (M. esculenta) commonly called morel is important for their therapeutic valve (Shameem et al. 2017). It is one of the precious edible fungi, well known for its nutritional values and delicate taste. Investigations have shown that M. esculenta demonstrates a wide range of biological activities, including antibacterial, anti-inflammatory, antitumor, antioxidant, and hepatoprotective activities (Shameem et al. 2017; Li et al. 2019). Morchella conica (M. conica) is another fungal species of the same genus in the Morchellaceae family, commonly known as black morels (Yang et al. 2019; Wu et al. 2020). It is reported to possess antioxidant, immunomodulatory, and antitumor properties (Xu et al. 2018). Few of its polysaccharides inhibit nitric oxide production in macrophages (Huang et al. 2012).
Fungi produce a variety of biomolecules, including peptides, alkaloids, polyketides, and terpenes with potential medicinal applications (Liu and Liu 2018). Purified carotenoids from yeast work as potential antibacterial biomolecules against several genera of bacteria including S. aureus (Vargas-Sinisterra and Ramírez-Castrillón 2021). Demand for scale-up of various naturally derived biomolecules from fungi has been increased due to rapid antibacterial resistance. There is limited information on the antibacterial potential of M. conica and M. esculenta, especially against MRSA and S. pyogenes. The raised bacterial resistance and health benefits of fungi led us to assess the antibacterial efficacy of M. conica and M. esculenta against methicillin-susceptible S. aureus, MRSA and S. pyogenes.
Materials and methods
Fungal material
The two fungal species used in this study, Morchella esculenta and Morchella conica were collected from Swat, Khyber Pakhtunkhwa Pakistan. Both species were identified based on their morphological characteristics as previously described (Hamayun et al. 2006; Sher et al. 2015).
Preparation of fungal extract
The fungi samples were air-dried and protected from sunlight exposure. The dried powder samples were suspended in methanol (MeOH) and ethanol (EtOH) (extracts/solvent ratio 1:10 weight/volume) and shaken at 120 RPM for 72 h in a shaking incubator at 25 °C temperature. After incubation, both extracts were filtered via a Whatman No 1 filter paper and the solvent was evaporated using a rotary evaporator under reduced pressure at 37 °C. The MeOH extracts were further fractioned in n-hexane. The resulting compounds from each solvent were dissolved in DMSO to prepare a stock solution (25 mg/ml).
Bacterial strains
S. aureus American-type culture collection (ATCC-29213) strain, MRSA (clinical strain), and S. pyogenes (clinical isolates) were obtained from the Department of Microbiology, University of Health Sciences Lahore, Pakistan. The stored bacteria from stock solution were initially streaked on blood agar.
Determination of the antibacterial activity of Morchella extracts
Antibacterial activity assays (disk diffusion method)
The antibacterial potential of M. esculenta and M. conica extracts were performed using disk diffusion method according to clinical and laboratory standards institute 2021 (CLSI 2021). The S. aureus and MRSA were cultured on nutrient agar, while S. pyogenes were cultured on sheep blood agar for 24 h. After incubation, the bacterial suspension was adjusted to 0.5 McFarland turbidity standards equivalent to a concentration of 1.5 × 108 CFU/ml. Bacterial suspensions were inoculated on Mueller–Hinton agar (MHA) plates except S. pyogenes which were inoculated on blood agar plates. Sterile plain disks (6 mm) impregnated in M. esculenta and M. conica extracts were placed on the inoculated plates. Ciprofloxacin and tetracycline were used as positive controls for S. aureus and S. pyogenes, respectively. Plates were incubated at 37 °C for 18–24 h. The inhibition zones were measured in millimeters (mm). Each test was performed in triplicate.
Minimum inhibitory concentration (MICs)
Standard broth microdilution methods were performed to assess the minimal inhibitory concentrations (MICs) of the tested compounds in accordance with the guidelines of CLSI, 2021 (CLSI 2006). In brief, 100 µl of Mueller–Hinton broth (MHB) was added to each well of the 96-well microdilution tray except sterility control. Then, 100 µl of all mushroom extract was added to each well in a series of twofold dilutions yielding different concentrations which ranged from 16 to 0.0625 mg/ml, except those wells which were acting as drug free and negative controls. 10 µl of bacterial suspension (approximately 2–8 × 105 CFU/ml) was poured into each well of microtiter plates except the wells of negative and sterility controls. Ciprofloxacin and oxacillin were used as a standard antibiotic for tested bacteria at the concentration of 128 µg/ml serially diluted to 0.5 µg/ml in accordance with the recommendations of CLSI 2021. The microtiter plates were incubated for 18–24 h at 37 °C. MIC was defined as the lowest concentration of antimicrobial agent which inhibited the visible growth of the bacteria in the wells. For determining MICs, the plates were visually examined for turbidity in comparison with the control well.
Spectrophotometric broth microdilution method
In addition to visual interpretation, spectrophotometric broth microdilution method was also used for the analyses of bacterial growth inhibition. After loading the microtiter plate, the optical density (OD) was taken through a microplate ELISA reader (Thermo Scientific) at 620 nm. The OD of each well was taken before incubation (t0) and after 24 h incubation (t24). Any negative value was assigned zero value, while value greater than 100 was taken as an accurate 100 value (Green et al. 2020). Following formula was used for the analyses of bacterial growth and growth inhibition (Sulej et al. 2019):
Minimum bactericidal concentration (MBC)
To determine the minimal bactericidal concentration (MBC), following microdilution test, a loopful of inoculum from each well of no visible bacterial growth was plated on Mueller–Hinton agar. The plates were incubated for 18–24 h at 37 °C. The MBC was determined as the lowest concentration of antimicrobial agents that can kill > 99.9% bacteria.
Preparation of samples for UPLC–MS analyses
The fungal extract (01 mg) from the stock solution was dissolved in 500 µl methanol. The methanolic solution was five times diluted in 50% acetonitrile and filtered through 2 µm pore size disposable syringe filters (Sartorius Minisart® SRP-15 syringe filters). The filtrate was centrifuged at 14,000 g for 10 min to remove any remaining particles. The working samples were transferred to special LC–MS glass vials before operating on UPLC–MS chromatography system.
Ultra-performance liquid chromatography mass spectroscopy (UPLC–MS) analyses
LC–MS analyses of M. esculenta and M. conica were performed on UPLC–MS system (Waters Corporation, USA) equipped with a sample manager, solvent manager, and column heater. The temperature of the sample manager was maintained at room temperature and the column temperature was set at 60 ◦C. The sample column was washed with acetonitrile after each run to remove any remaining compound. The mass spectrum measurement was performed in positive as well as negative mode (ESI−, ESI+) as the sample was run for 10 min.
Statistical analysis
For all bacterial isolates’ disk diffusion, MICs and MBCs results were expressed using means, standard deviations, and standard error of the mean (SEM). One-way analysis of variance (ANOVA) was performed to determine statistically significant differences among the means of tested agents. All statistical analyses were performed using Statistical Package for the Social Sciences (SPSS) version 20.0. The two-tailed P value ≤ 0.05 was considered to be statistically significant for all tests.
Results
Determination of antibacterial effectiveness of Morchella extracts via disk diffusion method
Antibacterial activity of M. esculenta extracts
The M. esculenta and M. conica extracts (ethanolic, methanolic, and n-hexane) were analyzed for their antibacterial potential against S. aureus, MRSA, and S. pyogenes using disc diffusion assay and depicted in Table 1. All the three types of extracts M. esculenta were active against all tested bacteria with inhibitory zone ranging from 10 to 21 mm. The activity of M. esculenta extracts was excellent against S. aureus with zones of inhibition ranging from 17.33 ± 0.3 mm to 21.00 ± 1.5 mm. The organism was also sensitive to ciprofloxacin with a clear zone of 24.33 ± 0.3 mm. The zone of inhibition of M. esculenta extracts for S. pyogenes ranged from 18.66 ± 0.3 mm to 20.33 ± 0.8 mm which was in parallel to tetracycline (19.33 ± 0.3 mm). Antibacterial activity of M. esculenta extracts against MRSA was faint as lower inhibitory zone of n-hexane fraction was 10.66 ± 0.3 mm. The maximum zone of inhibition of MeOH extract of M. esculenta against MRSA was 14.66 ± 0.3 mm, while MRSA was resistant to ciprofloxacin.
Antibacterial activity of M. conica extracts
MeOH extracts of M. conica spp. produced a clear zone of 19 mm against S. aureus and S. pyogenes as shown in Table 1. Likewise, the EtOH extracts showed an inhibitory zone of 17.00 ± 0.5 mm and 16.66 ± 0.3 mm against S. aureus and S. pyogenes, respectively. MRSA was also susceptible to M. conica extracts with an inhibition zone of 10–13 mm. Collectively, all morel extracts presented promising antibacterial potential against S. aureus and S. pyogenes as compared to MRSA.
Minimal inhibitory concentration and minimal bactericidal concentration of fungal extracts
The inhibitory and bactericidal potential of the fungal extracts against S. aureus and MRSA was determined by MIC and MBC methods. The extracts of M. conica confer inhibitory potential against S. aureus and MRSA. All three types of M. conica extracts inhibited S. aureus with MIC varied from ≥ 3.33 ± 0.6 to ≥ 16.0 ± 0 mg/ml (Table 2).
The MIC of M. esculenta against S. aureus both for MeOH and EtOH extracts was the same i.e., ≥ 6.66 ± 1.3 mg/ml, while for n-hexane fraction, it was ≥ 13.33 ± 2.6 mg/ml as shown in Table 2. The MIC and MBC values of MeOH extracts were twice higher for MRSA as compared to MIC and MBC values for S. aureus. Overall, the MIC values of both fungal extracts were considerably higher for MRSA than S. aureus.
S. aureus was sensitive to ciprofloxacin (MIC ≥ 1.00 ± 0 µg/ml); however, MRSA was resistant to ciprofloxacin (MIC ≥ 128 ± 0 µg/ml). MRSA also demonstrated a resistant pattern towards oxacillin (MIC ≥ 64 ± 0 µg/ml) (Table 2). It is noteworthy that all the fungal extracts inhibited S. aureus growth in a bactericidal manner with MBC value of 8–16 mg/ml) as shown in Table 2. Thus, all Morchella extracts showed statistically significant antibacterial potential against S. aureus (p ≤ 0.05).
Spectrophotometric broth microdilution method for inhibitory effects
The anti-bacterial potential of both fungal extracts was further analyzed by growth curve as shown in Figs 1, 2, 3 and 4. The bacterial growth was observed at different concentrations using spectrophotometric analysis. The growth of S. aureus cultures treated with MeOH M. conica extracts was gradually increased at concentrations ≤ 02 mg/ml, while for EtOH and N-hexane extracts of M. conica, the tested bacterial growth start increasing at concentrations ≤ 16 mg/ml. Similarly, the bacterial growth was increasing after treating with M. esculenta extract at concentrations ≤ 04 mg/ml. The MRSA growth slightly raised at the concentration of ≤ 08 mg/ml. Ciprofloxacin completely restricted the S. aureus growth up to the concentration of 02 µg/ml. There was 100% MRSA growth in the presence of oxacillin (32 µg/ml) and ciprofloxacin (04 µg/ml) as shown in Fig. 5.
The susceptibility pattern of S. aureus and MRSA treated with various concentrations of fungal extracts and antibiotics are presented in Tables 3 and 4. All three types of M. esculenta extracts suppressed more than 90% growth of S. aureus and MRSA at a concentration of 04 mg/ml. A significant bacterial growth inhibitory potential of M. conica was noted for its MeOH extract which 100% inhibited bacterial growth at the concentration of 04 mg/ml. While the growth of S. aureus was 99% limited by ciprofloxacin at the concentration of 0.250 µg/ml, however, none of its concentrations suppressed MRSA growth by 90%.
Compounds identification in extracts of M. conica and M. esculenta through UPLC–MS
The potential compounds identified in different extracts M. conica and M. esculenta are shown in Table 5. Nine compounds with different retention times were identified in M. conica, while 08 compounds were identified in M. esculenta using UPLC–MS. The known compounds identified in M. conica were: 3-Quinolinecarboxylic acid, 7-amino-1-ethyl-6-fluoro-1,4-dihydro-4-oxo, oleic acid, linoleic acid, palmitic acid, 2-Hydroxy-3-(4-methoxy ethyl phenoxy)-propanoic acid, ecgonine-methyl ester, rhoifolin, aspartame, and zopiclone N-oxide. The major compounds identified in the M. esculenta were: palmitic acid, oleic acid, naringenin-7-O glucoside, acenocoumarol, N-Succinyl-L-diamino pimelic acid, linoleic acid, and oleamide. Molecular weight, base peak (m/z), retention time, and molecular formula are given in Table 5.
Discussion
Decades of evolution have helped bacteria to survive in the magical era of antibiotic actions (Yagnik et al. 2021). MRSA is a high priority pathogen of WHO due to its surprisingly high resistance to currently available antibiotics. Vancomycin is the last choice antibiotic to treat MRSA infection; however, its severe side effects and emergence of bacterial resistance have limited its usage (Xu, 2020). Diseases caused by resistant organisms are a global health issue which has created the situation of dire need for the development of novel antimicrobial agents. Some approaches on antimicrobial natural products might overcome the bacterial resistance and may accelerate the discovery process of new antibiotics (Alves et al. 2014). The current study was focused on two macro-fungi (M. conica and M. esculenta) for the presence of anti-bacterial compounds and their potential effects against S. aureus, MRSA, and S. pyogenes. The results showed positive bacteriostatic and bactericidal activities of these fungal extracts against tested bacteria.
Biomolecules derived from fungal products are considered a diverse group of natural products. Secondary metabolites produced by fungi play an important role against microbial virulence by competing with them. Some of the natural products exhibit a broad spectrum of biocidal activity against human pathogenic bacteria (Jakubczyk and Dussart 2020). The discovery of penicillin by Sir Alexander Fleming in 1928 was an example of the importance of fungi in drug discovery. Screening for bioactive natural products led to the discovery of multiple antibiotics from Streptomyces species (Ligon, 2004; Zhu et al. 2014). Low molecular weight and also high molecular weight compounds found in the fungus are considered to be the most responsible agents for antibacterial activity (Heleno et al. 2013). Fruiting bodies and mycelia of mushrooms accumulate various types of bioactive metabolites with, anti-inflammatory, immunomodulatory, and antimicrobial properties (Alves et al. 2012). The results of the current study for the first time showed different compounds in M. esculenta and M. conica including: oleic acid, linoleic acid, palmitic acid, and propanoic acid. Presence of bioactive compounds including polyphenolic compounds, protein and polysaccharides in M. esculenta are responsible for strong biological activities (Wu et al. 2021).
Both M. esculenta and M. conica extracts associated S. aureus and S. Pyogenes growth inhibition was comparable to the inhibition presented by standard antibiotics, ciprofloxacin, and tetracycline commonly used to treat S. aureus and S. Pyogenes infections respectively (Aburawi et al. 2019; Ahmad et al. 2019). Among tested solvents, methanolic extract was excellent for its promising bacterial growth inhibition. We found various concentrations of active compounds in the crude extracts which were responsible for their antibacterial activity, but the anti-bacterial potentials of these compounds were also dependent on extract preparation. For example, some fungal extracts have promising antibacterial activity when methanol was used as the extraction solvent instead of water. This property is well documented by an author from the USA, who reported the significant antibacterial activity of 25 mushrooms against bacterial pathogens when methanol was used as an extracted solvent (Hassan et al. 2019). Fungal extracts used in the current study possessed low inhibitory effects against MRSA as compared to S. aureus and S. pyogenes, but its activity was better than ciprofloxacin. The lower inhibitory effects of fungal extracts against MRSA could possibly be attributed to the presence of virulence factors, plasmid, and acquisition of resistant genes in the bacteria (McClure et al. 2018; Kumar et al. 2020). However, antibacterial activity of both mushroom extracts (M. conica and M. esculenta) against MRSA could be a notable result of the study, whereas previous studies were limited to S. aureus (Shameem et al. 2017; Canli et al. 2019).
The current study evaluated mushrooms efficacy using standard broth microdilution method. Several authors have declared that the broth microdilution method is more suitable for the determining potential of plant extracts. This method is ideal when given compounds are administered orally because both the compound and microorganisms have a direct contact with each other (Abbes et al. 2012; Etame et al. 2019). In the present study, the MIC values of M. esculenta and M. conica extracts were higher for MRSA than the MSSA. Importantly, the growth of MRSA was not prevented by oxacillin. These results showed that the tested MRSA are multidrug-resistant strain (Kim et al. 2005). Varying degrees of bacterial inhibition might be linked to the presence of resistance factors such as transposons, plasmid as well as the genetic makeup of the organisms, and environmental factors (Bala et al. 2011; Gebreyohannes et al. 2019). The clinical isolates are more resistant than the standard strains due to the production of enzymes, resistant genes and efflux pumping (Gebreyohannes et al. 2019).
M. esculenta extracts demonstrated ≥ 99% inhibition of S. aureus growth with concentration of 6.66 mg/ml. The previous study has shown that M. esculenta-mediated gold nanoparticles (AuNPs) effectively inhibited S. aureus growth (Acay 2021). The MIC was 0.4421 mg/ml and this low MIC value may possibly be explained by the positive charge on AuNPs necessary for bacterial cell content leak, formation of holes in cell walls and cell death (Rai A et al. 2010; Acay 2021). It is known that fruiting bodies of M. esculenta are important source of polysaccharides, sterols, fatty acids, amino acids, and several secondary metabolites which are responsible for many biological effects (Lee et al. 2018b). The results of methanolic extract of M. conica were of particular interest as it showed excellent growth inhibitory effects against S. aureus at a very low concentration. This is in parallel to a study from Serbia where the S. aureus was more sensitive to the M. conica extracts (Vieira et al. 2016). Collectively, all mushroom extracts (M. esculenta and M. conica) suppressed the S. aureus growth in a bactericidal manner. Shameem et al. reported no bactericidal activity of the M. esculenta using ethyl acetate as a solvent against S. aureus (Shameem et al. 2017). However, the present results are in line with a study from Serbia and Portugal where methanolic extracts of mushrooms were used (Heleno et al. 2013; Vieira et al. 2016).
Spectrophotometric reading demonstrated excellent results for the presence or absence of bacterial growth after being treated with tested compounds. A similar result was demonstrated in a previous study on S. aureus and other bacteria (Erdoğan Eliuz 2021). Spectrophotometric broth microdilution provides precise and accurate results for the interpretation of MIC endpoints (Arthington-Skaggs et al. 2002).
Importantly, this is the first study to report the therapeutic effects of Morchella extracts against MRSA. Previously, Morchella extracts have been studied for their hypoglycemic, immunomodulatory, antifungal effects, and anti-bacterial effects other than MRSA (Su et al. 2013; Shameem et al. 2017; Canli et al. 2019; Begum et al. 2021). It is well established that fungal extracts are a rich source of antibacterial agents and bioactive compounds with high therapeutic outputs (Gebreyohannes et al. 2019). Since centuries, the consumption of Morchella mushrooms as a functional food is an additional benefit (Nitha and Janardhanan 2008). The use of standard broth microdilution method, spectrophotometric analyses, UPLC–MS of mushroom extracts in the current study is proposing its potential use in the pharmaceutical industry for the discovery of novel antimicrobial agents. Although, this small-scale study demonstrated the potential effects of Morchella extracts against tested bacteria, however, further research is required to elucidate their inhibitory mechanisms, toxicity and effectiveness.
Conclusion
Following conclusions can be drawn from this study: first, both fungal species (M. conica and M. esculenta) are edible mushrooms that can be considered a potential source of antibacterial agents, specifically against S. aureus, S. pyogenes, and MRSA. Second, the better growth inhibition of MRSA by the mushroom extracts as compared to available antibiotics is a promising result. These results highlight the use of these mushrooms in further studies. Further studies about the chemical composition, in vivo studies, and clinical trials on mushrooms must be conducted to expand the current results.
Data availability
All the authors of the study had full access to all data and take responsibility to submit for publication.
References
Abbes S, Trabelsi H, Amouri I, Sallemi H, Nej S, Fatma C, Makni F, Ayadi A (2012) Méthodes d’étude de la sensibilité in vitro de Candida spp. aux antifongiques. Ann Biol Clin (Paris) 70(6):635–642
Aburawi SM, Doro BM, Awad EA (2019) Effect of ciprofloxacin on S. aureus and E. coli growth in presence of vitamin C using cup cut diffusion method. J Pharm Pharmacol 7:473–484
Acay H (2021) Utilization of Morchella esculenta-mediated green synthesis golden nanoparticles in biomedicine applications. Prep Biochem Biotechnol 51(2):127–136
Ahmad MI, Keach JE, Behl T, Panichayupakaranant P (2019) Synergistic effect of α-mangostin on antibacterial activity of tetracycline, erythromycin, and clindamycin against acne involved bacteria. Chin Herb Med 11(4):412–416
Alves MJ, Ferreira IC, Dias J, Teixeira V, Martins A, Pintado M (2012) A review on antimicrobial activity of mushroom (Basidiomycetes) extracts and isolated compounds. Planta Med 78(16):1707–1718
Alves MJ, Ferreira IC, Lourenço I, Castro A, Pereira L, Martins A, Pintado M (2014) Wild mushroom extracts potentiate the action of standard antibiotics against multiresistant bacteria. J Appl Microbiol 116(1):32–38
Arthington-Skaggs BA, Lee-Yang W, Ciblak MA, Frade JP, Brandt ME, Hajjeh RA, Harrison LH, Sofair AN, Warnock WD (2002) Comparison of visual and spectrophotometric methods of broth microdilution MIC end point determination and evaluation of a sterol quantitation method for in vitro susceptibility testing of fluconazole and itraconazole against trailing and nontrailing Candida isolates. Antimicrob Agents Chemother 46(8):2477–2481
Atila F, Owaid MN, Shariati MA (2021) The nutritional and medical benefits of Agaricus bisporus: a review. J Microbiol Biotechnol Food Sci 2021:281–286
Bala N, Aitken EA, Fechner N, Cusack A, Steadman KJ (2011) Evaluation of antibacterial activity of Australian basidiomycetes macro fungi using a high-throughput 96-well plate assay. Pharm Biol 49(5):492–500
Begum N, Nasir A, Parveen Z, Muhammad T, Ahmed A, Farman S, Jamila N, Shah M, Bibi NS, Khurshid A (2021) Evaluation of the hypoglycemic activity of Morchella conica by targeting protein tyrosine phosphatase 1B. Front Pharmacol 12:1148
Canli K, Benek A, Şenturan M, Akata İ, Altuner EM (2019) In vitro antimicrobial activity of Morchella esculenta and Trametes versicolor. Mantar Dergisi 10(3):28–33
Chassagne F, Cabanac G, Hubert G, David B, Marti G (2019) The landscape of natural product diversity and their pharmacological relevance from a focus on the dictionary of natural products®. Phytochem Rev 18(3):601–622
CLSI (2006). Clinical and Laboratory Standards Institute method for dilution antimicrobial test for bacteria that grow aerobically; approved standard. (Eleventh Edition), approved standard M07-A11.
CLSI (2021) M100 performance standards for antimicrobial susceptibility testing a CLSI supplement for global application. Performance standards for antimicrobial susceptibility testing (2020). Sci Rep 11:16286
De Silva DD, Rapior S, Sudarman E, Stadler M, Xu J, Alias SA, Hyde KD (2013) Bioactive metabolites from macro fungi: ethno pharmacology, biological activities and chemistry. Fungal Divers 62(1):1–40
Doern GV, Jones RN, Pfaller MA, Kugler KC, Group SS (1999) Beach ML (1999) Bacterial pathogens isolated from patients with skin and soft tissue infections: frequency of occurrence and antimicrobial susceptibility patterns from the SENTRY antimicrobial surveillance program (United States and Canada, 1997). Diagn Microbiol Infect Dis 34(1):65–72
Durand GA, Raoult D, Dubourg G (2019) Antibiotic discovery: history, methods and perspectives. Int J Antimicrob Agents 53(4):371–382
Erdoğan Eliuz EA (2021) Antibacterial activity and antibacterial mechanism of ethanol extracts of Lentinula edodes (Shiitake) and Agaricus bisporus (button mushroom). Int J Environ Health Res. https://doi.org/10.1080/09603123.2021.1919292
Etame RME, Mouokeu RS, Poundeu FSM, Voukeng IK, Cidjeu CLP, Tiabou AT, Yaya AJG, Ngane RAN, Kuiate JR, Etoa FX (2019) Effect of fractioning on antibacterial activity of n-butanol fraction from Enantia chlorantha stem bark methanol extract. BMC Complement Altern Med 19(1):1–7
Falagas ME, Siempos II, Vardakas KZ (2008) Linezolid versus glycopeptide or β-lactam for treatment of Gram-positive bacterial infections: meta-analysis of randomised controlled trials. Lancet Infect Dis 8(1):53–66
Ferri M, Ranucci E, Romagnoli P, Giaccone V (2017) Antimicrobial resistance: a global emerging threat to public health systems. Crit Rev Food Sci Nutr 57(13):2857–2876
Gebreyohannes G, Nyerere A, Bii C, Berhe Sbhatu D (2019) Determination of antimicrobial activity of extracts of indigenous wild mushrooms against pathogenic organisms. Evid Based Complement Alternat Med. 2019:6212673
Gil-Gil T, Laborda P, Sanz-García F, Hernando-Amado S, Blanco P, Martínez JL (2019) Antimicrobial resistance: a multifaceted problem with multipronged solutions. Microbiologyopen 8(11):e945
Green KJ, Dods K, Hammer KA (2020) Development and validation of a new microplate assay that utilizes optical density to quantify the antibacterial activity of honeys including Jarrah, Marri and Manuka. Plos One 15(12):e0243246
Hamayun M, Khan SA, Ahmad H, Shin D-H, Lee I-J (2006) Morel collection and marketing: a case study from the Hindu-Kush mountain region of Swat. Pakistan Lyonia 11(2):7–13
Hassan F, Ni S, Becker TL, Kinstedt CM, Abdul-Samad JL, Actis LA, Kennedy MA (2019) Evaluation of the antibacterial activity of 75 mushrooms collected in the vicinity of Oxford, Ohio (USA). Int J Med Mushrooms 21(2):131–141
Hauser AR, Mecsas J, Moir DT (2016) Beyond antibiotics: new therapeutic approaches for bacterial infections. Clin Infect Dis 63(1):89–95
Heleno SA, Stojković D, Barros L, Glamočlija J, Soković M, Martins A, Queiroz MJR, Ferreira IC (2013) A comparative study of chemical composition, antioxidant and antimicrobial properties of Morchella esculenta (L.) Pers. from Portugal and Serbia. Food Res Int 51(1):236–243
Houri H, Kazemian H, Ebrahim-Saraie HS, Taji A, Tayebi Z, Heidari H (2017) Linezolid activity against clinical Gram-positive cocci with advanced antimicrobial drug resistance in Iran. J Glob Antimicrob Resist 10:200–203
Huang M, Zhang S, Zhang M, Ou S, Pan Z (2012) Effects of polysaccharides from Morchella conica on nitric oxide production in lipopolysaccharide-treated macrophages. Appl Microbiol Biotechnol 94(3):763–771
Imöhl M, Fitzner C, Perniciaro S, van der Linden M (2017) Epidemiology and distribution of 10 superantigens among invasive Streptococcus pyogenes disease in Germany from 2009 to 2014. PLoS ONE 12(7):e0180757
Jakubczyk D, Dussart F (2020) Selected fungal natural products with antimicrobial properties. Molecules 25(4):911
Kanayama S, Ikeda F, Okamoto K, Nakajima A, Matsumoto T, Ishii R, Amano A, Matsuzaki K, Matsumoto S (2016) In vitro antimicrobial activity of ozenoxacin against methicillin-susceptible Staphylococcus aureus, methicillin-resistant S. aureus and Streptococcus pyogenes isolated from clinical cutaneous specimens in Japan. J Infect Chemother. 22(10):720–723
Kim KJ, Yu HH, Cha JD, Seo SJ, Choi NY, You YO (2005) Antibacterial activity of Curcuma longa L. against methicillin-resistant Staphylococcus aureus. Phytother Res 19(7):599–604
Kollef M (2005) Antibiotic management of ventilator-associated pneumonia due to antibiotic-resistant gram-positive bacterial infection. Eur J Clin Microbiol Infect Dis 24(12):794–803
Kumar S, Singh S, Kumar V, Datta S, Dhanjal DS, Sharma P, Singh J (2020) Pathogenesis and antibiotic resistance of Staphylococcus aureus. Model organisms for microbial pathogenesis, biofilm formation and antimicrobial drug discovery. Springer, Singapore, pp 99–115
Lee AS, de Lencastre H, Garau J, Kluytmans J, Malhotra-Kumar S, Peschel A, Harbarth S (2018a) Methicillin-resistant Staphylococcus aureus. Nat Rev Dis Primers 4(1):1–23
Lee SR, Roh H-S, Lee S, Park HB, Jang TS, Ko Y-J, Baek K-H, Kim KH (2018b) Bioactivity-guided isolation and chemical characterization of antiproliferative constituents from morel mushroom (Morchella esculenta) in human lung adenocarcinoma cells. J Funct Foods 40:249–260
Li W, Cai Z-N, Mehmood S, Liang L-L, Liu Y, Zhang H-Y, Chen Y, Lu Y-M (2019) Anti-inflammatory effects of Morchella esculenta polysaccharide and its derivatives in fine particulate matter-treated NR8383 cells. Int J Biol Macromol 129:904–915
Ligon BL (2004) Penicillin: its discovery and early development. Semin Pediatr Infect Dis 15(1):52–7
Lindequist U, Niedermeyer TH, Jülich W-D (2005) The pharmacological potential of mushrooms. Evid Based Complement Alternat Med 2(3):285–299
Liu J, Liu G (2018) Analysis of secondary metabolites from plant endophytic fungi. In: Ma Wenbo, Wolpert Thomas (eds) Plant pathogenic fungi and oomycetes. Springer, NY, pp 25–38
Lowy FD (1998) Staphylococcus aureus infections. New Engl J Med 339(8):520–532
McClure J-AM, Lakhundi S, Kashif A, Conly JM, Zhang K (2018) Genomic comparison of highly virulent, moderately virulent, and avirulent strains from a genetically closely-related MRSA ST239 sub-lineage provides insights into pathogenesis. Front Microbiol 9:1531
Mussagy CU, Winterburn J, Santos-Ebinuma VC, Pereira JFB (2019) Production and extraction of carotenoids produced by microorganisms. Appl Microbiol Biotechnol 103(3):1095–1114
Newman DJ, Cragg GM (2016) Natural products as sources of new drugs from 1981 to 2014. J Nat Prod 79(3):629–661
Niederman MS (2001) Impact of antibiotic resistance on clinical outcomes and the cost of care. Crit Care Med 29(4):N114–N120
Niego AG, Rapior S, Thongklang N, Raspé O, Jaidee W, Lumyong S, Hyde KD (2021) Macro fungi as a nutraceutical source: promising bioactive compounds and market value. J Fungi 7(5):397
Nitha B, Janardhanan K (2008) Aqueous-ethanolic extract of morel mushroom mycelium Morchella esculenta, protects cisplatin and gentamicin induced nephrotoxicity in mice. Food Chem Toxicol 46(9):3193–3199
Organization WH (2017) Global priority list of antibiotic-resistant bacteria to guide research, discovery, and development of new antibiotics. Geneva: WHO; 2017. (Google Scholar there is no corresponding record for this reference)
Pfaller MA, Mendes RE, Duncan LR, Flamm RK, Sader HS (2018) Activity of dalbavancin and comparator agents against Gram-positive cocci from clinical infections in the USA and Europe 2015–16. J Antimicrob Chemother 73(10):2748–2756
Qin H-L, Liu J, Fang W-Y, Ravindar L, Rakesh K (2020) Indole-based derivatives as potential antibacterial activity against methicillin-resistance Staphylococcus aureus (MRSA). Eur J Med Chem 194:112245
Rai A, Prabhune A, Perry CC (2010) Antibiotic mediated synthesis of gold nanoparticles with potent antimicrobial activity and their application in antimicrobial coatings. J Mater Chem 20(32):6789–6798
Rai MK, Gaikwad S, Nagaonkar D, dos Santos CA (2015) Current advances in the antimicrobial potential of species of genus Ganoderma (higher Basidiomycetes) against human pathogenic microorganisms. Int J Med Mushrooms 17(10):921–932
Shameem N, Kamili AN, Ahmad M, Masoodi F, Parray JA (2017) Antimicrobial activity of crude fractions and morel compounds from wild edible mushrooms of north western Himalaya. Microb Pathog 105:356–360
Sher H, Aldosari A, Bussmann RW (2015) Morels of Palas Valley, Pakistan: a potential source for generating income and improving livelihoods of mountain communities. Econ Bot 69(4):345–359
Smith TL, Pearson ML, Wilcox KR, Cruz C, Lancaster MV, Robinson-Dunn B, Tenover FC, Zervos MJ, Band JD, White E (1999) Emergence of vancomycin resistance in Staphylococcus aureus. New Engl J Med 340(7):493–501
Su C-a, Xu X-y, Liu D-y, Wu M, Zeng F-q, Zeng M-y, Wei W, Jiang N, Luo X (2013) Isolation and characterization of exopolysaccharide with immunomodulatory activity from fermentation broth of Morchella conica. DARU J Pharm Sci 21(1):1–6
Sulej J, Osińska-Jaroszuk M, Jaszek M, Grąz M, Kutkowska J, Pawlik A, Chudzik A, Bancerz R (2019) Antimicrobial and antioxidative potential of free and immobilised cellobiose dehydrogenase isolated from wood degrading fungi. Fungal Biol 123(12):875–886
Tacconelli E, Carrara E, Savoldi A, Harbarth S, Mendelson M, Monnet DL, Pulcini C, Kahlmeter G, Kluytmans J, Carmeli Y (2018) Discovery, research, and development of new antibiotics: the WHO priority list of antibiotic-resistant bacteria and tuberculosis. Lancet Infect Dis 18(3):318–327
Tickell KD, Sharmin R, Deichsel EL, Lamberti LM, Walson JL, Faruque A, Pavlinac PB, Kotloff KL, Chisti MJ (2020) The effect of acute malnutrition on enteric pathogens, moderate-to-severe diarrhea, and associated mortality in the Global Enteric Multicenter Study cohort: a post-hoc analysis. Lancet Glob Health 8(2):e215–e224
Vargas-Sinisterra AF, Ramírez-Castrillón M (2021) Yeast carotenoids: production and activity as antimicrobial biomolecule. Arch Microbiol 203(3):873–888
Vieira V, Fernandes Â, Barros L, Glamočlija J, Ćirić A, Stojković D, Martins A, Soković M, Ferreira IC (2016) Wild Morchella conica Pers. from different origins: a comparative study of nutritional and bioactive properties. J Sci Food Agric 96(1):90–98
Vincent J-L, Bihari DJ, Suter PM, Bruining HA, White J, Nicolas-Chanoin M-H, Wolff M, Spencer RC, Hemmer M (1995) The prevalence of nosocomial infection in intensive care units in Europe: results of the European Prevalence of Infection in Intensive Care (EPIC) study. JAMA 274(8):639–644
Volcão LM, Halicki PB, Bilibio D, Ramos DF, Bernardi E, Da Silva Júnior FMR (2021) Biological activity of aqueous extracts of Southern Brazilian mushrooms. Int J Environ Health Res 31(2):148–159
Wu G, Sun Y, Deng T, Song L, Li P, Zeng H, Tang X (2020) Identification and functional characterization of a novel immunomodulatory protein from Morchella conica SH. Front Immunol. https://doi.org/10.3389/fimmu.2020.559770
Wu H, Chen J, Li J, Liu Y, Park HJ, Yang L (2021) Recent advances on bioactive ingredients of Morchella esculenta. Appl Biochem Biotechnol 193(12):4197–4213
Xu Z (2020) 1, 2, 3-Triazole-containing hybrids with potential antibacterial activity against methicillin-resistant Staphylococcus aureus (MRSA). Eur J Med Chem 206:112686
Xu N, Lu Y, Hou J, Liu C, Sun Y (2018) A polysaccharide purified from Morchella conica Pers. prevents oxidative stress induced by H2O2 in human embryonic kidney (HEK) 293T cells. Int J Mol Sci 19(12):4027
Xu W-C, Silverman MH, Yu XY, Wright G, Brown N (2019) Discovery and development of DNA polymerase IIIC inhibitors to treat Gram-positive infections. Biorg Med Chem 27(15):3209–3217
Yagnik D, Ward M, Shah AJ (2021) Antibacterial apple cider vinegar eradicates methicillin resistant Staphylococcus aureus and resistant Escherichia coli. Sci Rep 11(1):1–7
Yang C, Meng Q, Zhou X, Cui Y, Fu S (2019) Separation and identification of chemical constituents of Morchella conica isolated from Guizhou Province China. Biochem Syst Ecol 86:103919
Zhang D, Qian Y, Zhang S, Ma P, Zhang Q, Shao N, Qi F, Xie J, Dai C, Zhou R (2019) Alpha-beta chimeric polypeptide molecular brushes display potent activity against superbugs-methicillin resistant Staphylococcus aureus. Sci China Mater 62(4):604–610
Zhu H, Swierstra J, Wu C, Girard G, Choi YH, Van Wamel W, Sandiford SK, van Wezel GP (2014) Eliciting antibiotics active against the ESKAPE pathogens in a collection of actinomycetes isolated from mountain soils. Microbiology 160(8):1714–1725
Zhu F, Du B, Bian Z, Xu B (2015) Beta-glucans from edible and medicinal mushrooms: characteristics, physicochemical and biological activities. J Food Compost Anal 41:165–173
Acknowledgements
We acknowledge with thanks Iftekhar Ahmad and Kashif Ahmad for their help and support. The collaboration of the Pharmacology Department of the institute and those who helped us in this research work is appreciated.
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This study was supported by Department of Microbiology, University of Health Sciences Lahore Pakistan.
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FUH and MI designed study and developed the original idea and wrote the manuscript; FUH performed the experiments and wrote the manuscript. MI, SS, UA, and AG contributed with the experiment’s setup. All the authors read and approved the final draft.
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The research project was approved by the University of Health Sciences Lahore, Pakistan Ethical review committee (No: UHS/Reg-21/ERC/1481).
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Communicated by Erko Stackebrandt.
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Haq, F.U., Imran, M., Saleem, S. et al. Investigation of Morchella esculenta and Morchella conica for their antibacterial potential against methicillin-susceptible Staphylococcus aureus, methicillin-resistant Staphylococcus aureus and Streptococcus pyogenes. Arch Microbiol 204, 391 (2022). https://doi.org/10.1007/s00203-022-03003-8
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DOI: https://doi.org/10.1007/s00203-022-03003-8