Abstract
The Three Sites Exchange Model (3SEM) was properly used to describe Proton (1H) Magnetic Relaxation Dispersion (1HMRD) in intracellular samples of hemoglobin A (HbA) and hemoglobin S (HbS) at 310 K. The HbA and HbS samples were obtained from whole blood of voluntary donors and patients, respectively, and processed by classical methods (centrifugation, decanting and freezing–thawing cycles). The 1HMRD profiles (20 kHz–60 MHz) were obtained using a Fast Field Cycling NMR Relaxometer (Stelar FFC 2000 Spinmaster) and Minispec relaxometers (Mq20, Mq60). The 3SEM used includes the contribution of labile protons from the structure of the protein; and the contribution of the cross relaxation to dispersion was estimated as: at least one order of magnitude lower than the total dispersion. Two dispersions were found: one of them properly describing the hemoglobin rotational correlation time and another one probably related to internal and/or hydrated water molecules with effective correlation times higher than 1 ns and main residence times less than the rotational correlation time of the protein. The use of the 3SEM creates the conditions to properly explain proton magnetic relaxation during the HbS polymerization process.
Similar content being viewed by others
Avoid common mistakes on your manuscript.
1 Introduction
Proton (1H) Magnetic Relaxation has been successfully used to develop medical applications [1,2,3,4] in Sickle Cell Disease(SCD) [5,6,7,8,9,10]. The behaviors of the transverse (T2) and longitudinal (T1) relaxation times in intracellular hemoglobin (Hb) solutions have allowed to determine the delay time of the hemoglobin S (HbS) polymerization process [1, 2]; giving the possibility of to differentiate the crisis and the steady state in SCD patients [2], as well as to evaluate a potential treatment [1, 2, 4]. To explain these T1 and T2 behaviors a two sites water exchange model (2SWEM) [11,12,13,14,15,16,17] was used (see appendix 1) considering an increasing of the Hb rotational correlation time (τR) from 50 to 98 ns [1, 2]. Nevertheless, the τR values obtained for intracellular Hb solutions do not match with the expected values according to the Debye and Mooney models (~ 172 ns) [18], moreover, this analysis does not consider the behavior of the bound water fraction (Pb) during HbS polymerization [15]. On the other hand, the 2SWEM has received a lot of criticism related with its reduced capacity to describe proton relaxation in protein solutions due to the low numbers of sites available for water binding to the protein (nws) obtained using this approach; and because of, this model, predicts a Lorentzian dispersion which is not reproduced experimentally [15, 19]. Additionally, the performed analysis does not take into account the contribution to 1H magnetic relaxation due to cross-relaxation neither the contribution from labile protons at the protein structure which exchange with the solvent.
According to what was discussed above, to explain the T1 and T2 behaviors during HbS polymerization we need another experimental method to determine τR and, at least, to estimate the Pb behavior. Also we need another physical approach to describe relaxation, which must includes the cross relaxation and labile protons contributions.
In this work we have used the 1H Magnetic Relaxation Dispersion (1HMRD) experiment to evaluate τR, and other parameters directly related to Pb, in intracellular Hb samples. A three sites exchange model (3SEM), including the contributions of labile protons and cross relaxation, was used as physical approach to describe 1H magnetic relaxation. The obtained results create the conditions to perform a proper analysis during HbS polymerization.
2 Materials and Methods
Samples of whole blood were obtained from voluntary healthy donors and SCD patients (residual samples from the ULB Brussels University Hospital obtained after routine blood tests were finished). The hemoglobin A (HbA) and HbS samples were prepared from whole blood using classical methods [11, 12, 18, 20, 21] and 500 µl of Hb solution were transferred to a NMR tube for the measurements.
A Fast Field Cycling NMR Relaxometer (Stelar FFC 2000 Spinmaster) was used, in the range from 20 kHz to 10 MHz, to obtain the 1HMRD profiles at 310 K, which were represented as semilog plots of R1 (1/T1) versus the Larmour frequency (ω0) divided by 2π. Additional points at 20 MHz and 60 MHz were added after measuring the samples in the Mq20 and Mq60 NMR analyzers (Minispec) from Bruker. For each sample at least five 1HMRD profiles were measured and the values of the obtained parameters reported as: ū ± SD. Here ū and SD represent the main value and the standard deviation of the performed measurements.
3 Results and Discussion
Figure 1 shows the typical 1HMRD profile obtained in intracellular Hb solutions at 310 K. The 1HMRD profiles were fitted using the Eqs. (1) and (2) corresponding to the 2SWEM and the 3SEM [16, 22,23,24,25,26], respectively (see appendix 1 and 2):
Here \(R_{1w}^{bulk}\) is the longitudinal magnetic relaxation rate of the 1H in the solvent, γ is the 1H gyromagnetic ratio, \(\hbar\) is the Planck’s constant divided by 2π, μ0 is the magnetic permeability of the vacuum and r is the inter proton distance. In Eq. (2) α (characterizing the high-frequency relaxation rate plateau) is ascribed to the hydrated water molecules at the protein surface and β (characterizing the magnitude of the relaxation dispersion) is ascribed to the internal water molecules and the labile protons at the protein structure [22].
The parameters resulting from the fit of the experimental 1HMRD profiles to Eq. (2) appear summarized in Table 1.
The values of α, β and τR obtained for intracellular HbA and HbS samples are one order of magnitude bigger than those obtained in previous works for diluted solutions of Bovine Pancreatic Trypsin Inhibitor (BPTI, 6511 Da) by Bertil Halle and co-workers using the same approach [16, 22]. This is a coherent result because Hb is a 64,500 Da protein, which has a major size and a major surface, and also this macromolecule should has a major amount of cavities and deep crevices. These differences could increase the number of water molecules bound to the protein molecule at its surface and in small cavities and deep crevices; as well as the number of labile protons at the macromolecular structure; giving place to the increment of α and β (see appendix 2). The increasing of τR could be explained by the increment in size and also by the increasing of protein–protein interactions considering the HbA and HbS concentration [13, 22]. β includes the contribution of the labile protons at the protein structure, which has been estimated as 4 times the contribution of internal water molecules for pH values as used in this work (pH = 7.4) [22].
To evaluate the contribution of the cross-relaxation, a negative term (− βcrossτRFcross(ω0τR)) was added to the Eq. (2) (see appendix 2) [22], where Fcross is a dispersion function. The fitting of the experimental 1HMRD profiles to this modified equation allowed to obtain the values of the dispersion magnitude corresponding to the contribution of the cross-relaxation (βcross), these values appear summarized in Table 2 for all the studied samples. The values of βcross are, at least, one order of magnitude lower than the values of β (Table 1). Which means that the contribution of cross-relaxation to dispersion can be neglected and Eq. (2) can be used to properly describe 1HMRD experimental profiles as in Fig. 1 and Table 1.
The 2SWEM clearly fail to fit the experimental 1HMRD profiles (see Fig. 1, adjusted r square ~ 0.7–0.8). To solve this inconvenient, suitable mathematical approaches were developed by Lindstrom and Koenig (LK) [15] and Hallenga and Koenig (HK) [19]:
where B represents the magnitude of the proton dipolar interaction and E includes the relaxation of bulk water as well as other high-frequency contributions to relaxation. G, λ, ε, H and νc are parameters obtained from the fit [15, 19]. In the HK approach τR = \(\sqrt{3}\)/(6πνC) and in the case of LK model τR is obtained directly from the fit. The HK model is the most used approach and is commonly known as Cole–Cole expression [19, 27]. Despite its really good description of the 1HMRD experimental profiles (see Fig. 2, adjusted r square ~ 0.99), the LK and HK methods have received a lot of criticism because of those models are not properly based on proton magnetic relaxation theory [27].
The 3SEM improved the description of the experimental 1HMRD profiles in intracellular Hb solutions (see Fig. 1, adjusted r square ~ 0.95) with respect to the 2SWEM, obtaining a performance comparable with the LK and HK approaches. The cause of the similitude between the 3SEM and the suitable mathematical approaches (LK and HK models) is the presence, in all of these models, of three contributions to relaxation: the bulk water contribution, a non-dispersive term and a dispersive contribution. In the Eq. (3) E can be divided in bulk water contribution and others high-frequency contributions (non-dispersive term) and in the Eq. (4) G is the non-dispersive term. Moreover, \(BP_{b} \sqrt 3\) and H can be considered dispersion magnitudes in Eqs. (3) and (4), respectively. On the other hand, the main handicaps of the 2SWEM are do not consider a non-dispersive term and to locate the bound water only at the protein surface considering that this water provokes the dispersion.
Table 3 includes the values of τR obtained for our HbA and HbS samples using the LK and HK approaches as well as the 2SWEM, these values are in the same order of magnitude of those obtained using the 3SEM (Table 1). Here is remarkable the coincidence between the 3SEM and the LK method. Nevertheless, as in the case of Saturation Transfer Electronic Paramagnetic Resonance (ST-EPR) measurements [18], all of these values do not match with the theoretical prediction performed by the Debye and Mooney models (~ 172 ns) for intracellular concentration and 310 K.
In spite of the increased quality of the fit achieved using the 3SEM, it is clear that it needs to be improved. For that purpose we have suggested to consider two dispersions as follow:
Here the subscripts 1 and 2 refer to each dispersion and τC is the effective correlation time of the proton population provoking the dispersion of magnitude β. Figure 3 shows the fits of the typical 1HMRD experimental profile, obtained in intracellular Hb solutions (310 K), to the 3SEM with one dispersion (Eq. (2)) and two dispersions (Eq. (5)), the parameters resulting of the fit to the Eq. (5) appear summarized in Table 4.
Clearly the 3SEM with two dispersions fitted the experimental 1HMRD profiles more proper than the 3SEM with only one dispersion. Two dispersions were found: one of them in the interval of frequencies from 0.3 MHz to 0.6 MHz and with correlation times in the range between 141.2 ns and 321.0 ns; and another dispersion in the interval of frequencies from 4.6 MHz to 8.4 MHz and with correlation times in the range between 11.0 ns and 20.3 ns. The correlation times associated to the first dispersion really match with the theoretical prediction for τR according to the Mooney and Debye models (~ 172 ns), nevertheless, the origin of the second dispersion is unclear. In the 1HMRD profiles obtained in concentrated protein solutions, two dispersions are usually associated to the protein–protein interactions [13], nonetheless, these interactions should give place to one increased correlation time and not to one minor value as is the case in the second dispersion. Dissolved oxygen also could give place to one additional dispersion in 1HMRD [13], but this dispersion usually appear around 20 MHz and require an improved sensitivity to be observed. We suggest the second dispersion could be related to internal water molecules with \(\tau_{res}^{in} < \tau_{R}\), where \(\tau_{res}^{in}\) dominates the effective correlation time (\(\frac{1}{{\tau_{c}^{in} }} = \frac{1}{{\tau_{res}^{in} }} + \frac{1}{{\tau_{R} }}_{{}}\)) of the dispersion. Something similar could occur with a small population of hydrated water molecules at the protein surface: more extensively hydrogen bonded than the majority of the hydrated water molecules [16], with effective correlation times higher than 1 ns and dispersing (when these molecules are present) in our frequency range of study. In any case, more deep experimental and theoretical analysis are required to define the origin of this second dispersion and this must be the subject of future works.
The Eq. (2), including or not the modification suggested in Eq. (5), is more adequate to analyze 1H magnetic relaxation during HbS polymerization than the Eq. (1) used in previous works [1, 2, 11, 12]. This physical approach describe more properly the Hb + water solution and the 1H magnetic relaxation inside it, particularly the 3SEM with two dispersions allows the proper evaluation of τR. On the other hand, the α and β values could be useful to estimate Pb behavior.
4 Conclusions
The three Sites Exchange Model, including the contribution of labile protons from the structure of the protein, showed to be more adequate than the two Sites Water Exchange Model to describe the 1HMRD profiles in intracellular hemoglobin solutions; the cross-relaxation contribution to the dispersion magnitude was, at least, one order of magnitude lower than the total dispersion magnitude. Two dispersions were found: one of them properly describing the hemoglobin rotational correlation time and another one probably related to internal and/or hydrated water molecules with effectives correlation times higher than 1 ns and main residence times less than the protein rotational correlation time. The use of the three Sites Exchange Model creates the conditions to properly explain proton magnetic relaxation during HbS polymerization.
Data availability
The datasets generated during and/or analyzed during the current study are available from the corresponding author on reasonable request.
References
M.A. Lores-Guevara, J.C. García-Naranjo, C.A. Cabal-Mirabal, Appl. Magn. Reson. 50, 541 (2019). https://doi.org/10.1007/s00723-018-1104-0
C.A. Cabal-Mirabal, A. Fernández-García, M.A. Lores-Guevara, E. González-Dalmau, L. Oramas-Díaz, Appl. Magn. Reson. 49, 589 (2018). https://doi.org/10.1007/s00723-018-0985-2
C.A. Cabal-Mirabal, M.A. Lores-Guevara, V.I. Chizhik, S.O. Rabdano, J.C. García-Naranjo, Appl Magn Reson. (2020). https://doi.org/10.1007/s00723-020-01241-x
N. Archer, F. Galacteros, C. Brugnara, Am. J. Hematol. 90, 934 (2015). https://doi.org/10.1002/ajh.24116
L. Gravitz, S. Pincock, Nature (2014). https://doi.org/10.1038/515S1a
F.B. Piel, M.H. Steinberg, D.C. Rees, N. Engl, J. Med. 376, 1561 (2017). https://doi.org/10.1056/NEJMra1510865
E.A. Ajjack, H.A. Awooda, S.E. Adalla, Int. J. Hematol. Disord. 1, 8 (2014). https://doi.org/10.12691/ijhd-1-1-2
L.V. Parise, N. Berliner, Blood 127, 789 (2016). https://doi.org/10.1182/blood-2015-12-674606
E.I. Obeagu, K.C. Ochei, B.N. Nwachukwu, B.O. Nchuma, Sch. J. App. Med. Sci. A3, 2244 (2015)
A. Nowogrodzki, Nature 596, S13 (2021). https://doi.org/10.1038/d41586-021-02143-z
M.A. Lores-Guevara, C.A. Cabal-Mirabal, Appl. Magn. Reson. 28, 79 (2005). https://doi.org/10.1007/BF03166995
Y. Cabrales, M.A. Lores-Guevara, Y. Machado, Appl. Magn. Reson. 33, 207 (2008). https://doi.org/10.1007/s00723-008-0074-z
S. Kiihne, R.G. Bryant, Biophys. J. 78, 2163 (2000). https://doi.org/10.1016/S0006-3495(00)76763-4”
I.R. Kleckner, M.P. Foster, Biochim. Biophys. Acta 1814, 942 (2011). https://doi.org/10.1016/j.bbapap.2010.10.012
T.R. Lindstrom, S.H. Koenig, J. Magn. Reson. A15, 344 (1974)
B. Halle, Phil. Trans. R. Soc. Lond. B. 359, 1207 (2004). https://doi.org/10.1098/rstb.2004.1499
M.A. Lores-Guevara, Y. Mengana-Torres, J.C. García-Naranjo, N. Rodríguez-Suárez, L.C. Suáres-Beyries, M.A. Marichal-Feliu, T. Simón-Boada, I.C. Rodríguez-Reyes, J. Phillipé, Appl. Magn. Reson. 49, 1075 (2018). https://doi.org/10.1007/s00723-018-1026-x
M.A. Lores-Guevara, C.A. Cabal-Mirabal, O. Nascimento, A.M. Gennaro, Appl. Magn. Reson. 30, 121 (2006). https://doi.org/10.1007/BF03166986
K. Hallenga, S.H. Koenig, Biochemistry A15, 4255 (1976)
M.A. Lores-Guevara, Y.M. Mengana-Torres, J.C. García-Naranjo, A. Ramírez-Aguilera, L.C. Suáres-Beyries, M.A. Marichal-Feliu, T. Simón-Boada, J. Philippé, J. Biosci. Med. 4, 152 (2016). https://doi.org/10.4236/jbm.2016.412019
M.A. Lores-Guevara, J.C. García-Naranjo, Y.M. Mengana-Torres, J. Pereira, Adv. Biol. Chem. 4, 388 (2014). https://doi.org/10.4236/abc.2014.46044
K. Venu, V.P. Denisov, B. Halle, J. Am. Chem. Soc. 119, 3122 (1997). https://doi.org/10.1021/ja963611t
V.P. Denisov, B. Halle, Faraday Discuss. 103, 227 (1996). https://doi.org/10.1039/FD9960300227
V.P. Denisov, J. Peters, H.D. Hōrlein, B. Halle, Nature Struct. Biol. 3, 505 (1996). https://doi.org/10.1038/nsb0696-505
K. Modig, E. Liepinsh, G. Otting, B. Halle, J. Am. Chem. Soc. 126, 102 (2004). https://doi.org/10.1021/ja038325d
B. Halle, V.P. Denisov, Meth. Enzymol. 338, 178 (2001). https://doi.org/10.1016/s0076-6879(02)38220-x
B. Halle, H. Johanneson, K. Venu, J. Magn. Reson. 135, 1 (1998). https://doi.org/10.1006/JMRE.1998.1534
Acknowledgements
This work was supported by the FNRS (FONDS NATIONAL DE LA RECHERCHÉ SCIENTIFIQUE) from Belgium, and the researchers of the NMR LABORATORY OF THE UNIVERSITY OF MONS. The authors also want to thanks to the ULB BRUSSELS UNIVERSITY HOSPITAL for its support. At the same time we want to recognize the contribution of Lissett Lores Meléndez, Cuban Student of Medicine at the INSTITUTO SUPERIOR DE CIENCIAS MÉDICAS DE SANTIAGO DE CUBA, during data processing and the writing of the manuscript. On the other hand, we really appreciate the opinions and suggestions of Professor Pascal H. Fries during manuscript revision.
Author information
Authors and Affiliations
Corresponding author
Additional information
Publisher's Note
Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.
Appendices
Appendix 1
The two sites water exchange model (2SWEM) for 1H magnetic relaxation in protein solutions.
This approach [11,12,13,14,15] considers a fast exchange of water molecules between the solvent and the nws reduced amount of sites at the protein surface available for water binding. The water is considered irrotationally bound to these sites and the 1H-1H intramolecular dipolar interaction is defined as the main contribution to 1H water relaxation. Moreover, a mono-exponential autocorrelation function is used to describe the dipolar couplings and the interacting spins are considered as included in one spherical molecule rotating isotropically in a continuous media.Thus, the 1H water magnetic relaxation can be described as:
In the Eq. (6), R2 = 1/T2 and \(R_{2w}^{bulk}\) is the transverse proton magnetic relaxation rate in the solvent.τC is the effective correlation time of the bound water, which includes the contributions of the bound water residence time (τres) and τR according to [16]:
As the bound water has been considered irrotationally bound to the protein (τres > > τR), then τC = τR. Pb is a function of nws, the molar concentration of Hb (NHb), the molarity of water (Nw) and the volume fraction occupied by the macromolecules (V) [11, 13, 17]:
Assuming nws ≤ 10, as suggested by several authors [16], Pb is in the order of 10–4 for intracellular Hb (NHb = 5 mM/l) and the fraction of free water (solvent), which appears multiplying to \(R_{1w}^{bulk}\) and \(R_{2w}^{bulk}\) in the Eq. (6), can be considered equal to one.
Appendix 2
The three sites exchange model (3SEM) for 1H magnetic relaxation in protein solutions.
The longitudinal magnetic relaxation of the 1H in aqueous solutions of proteins is dominated by the R1 of the water protons (R1w) and the labile protons at the protein structure (R1p) [1, 11, 13, 15, 16, 22]. In aqueous solutions of proteins there are three types of water: internal (in), hydrated (hy) and free (bulk) water [16, 22]. The internal water is extensively bounded to the protein, through hydrogen bonds, in small cavities and deep crevices localized at the macromolecular structure [23, 24], having main residence times (\(\tau_{res}^{in}\)) from10−10 s to 10−3 s [22,23,24,25], and rotational correlation times (\(\tau_{c}^{in}\)) greater than 10−9 s [26]. The hydrated water is bounded to the external protein surface through hydrogen bonds, having main residence times (\(\tau_{res}^{hy}\)) and rotational correlation times (\(\tau_{c}^{hy}\)) in the range from 10−11 s to 10−10 s [23, 25]. The free water is characterized by rotational correlation times (\(\tau_{c}^{bulk}\)) in the order of 10−12 s [16]. The labile protons are short lived protons (low values of residence times:\(\tau_{res}^{p}\)) located in specific residues at the protein structure. The internal and hydrated water, as well as the labile protons, exchange fast with the solvent (\(\tau_{res}^{in} ,\tau_{res}^{hy} ,\tau_{res}^{p} < < R_{1}^{ - 1}\)). The 1HMRD profiles in aqueous solutions of proteins can be described using the following equation system [22]:
where \(R_{1w}^{hy}\) is the longitudinal magnetic relaxation rate of the 1H at the hydrated water molecules and the symbol < > AV is used to indicate average value. Nhy and Nin are the numbers of hydrated and internal water molecules per protein molecule. A is a generalized orientational order parameter and D is the dipole coupling constant [22]. \(A_{\mu }^{{{\text{int}} ra}}\) and \(D_{\mu }^{{{\text{int}} ra}}\) correspond to the intramolecular dipolar interaction between the protons belonging to the internal water molecules. \(A_{\mu 1i}^{{{\text{int}} er}}\),\(A_{\mu 2i}^{{{\text{int}} er}}\), \(D_{\mu 1i}^{{{\text{int}} er}}\) and \(D_{\mu 2i}^{{{\text{int}} er}}\) correspond to the intermolecular dipolar interactions between the protons belonging to the internal water molecules and the ith proton at the macromolecular structure. Here has been considered that the R1 of the protons at the internal water molecules and the R1 of the labile protons disperse with the same effective correlation time: τC.
In the Eq. (9), the μ sum is over the Nin internal water molecules, the i sum is over all protons partners in long-lived intermolecular dipole couplings, the k sum is over all labile protons groups and subscripts 1 and 2 refer to the two protons at the internal water molecule [22]. NT is the total number of bound water molecules per protein molecule (NT = Nin + Nhy), Np is the total number of labile protons per protein molecule and Npk is the number of labile protons in each group. For intermolecular dipole couplings within the cluster of the internal water molecules ki is a function of ω0 and τR, and for intermolecular dipole couplings with protein protons ki = 1 [22]. ωα is a resonance frequency at the high-frequency relaxation rate plateau. The Eq. (9) is strictly valid for an isolated pair of dipole-coupled equivalent I = 1/2 nuclei.
To take into account the contribution from cross-relaxation, a negative term is added to the first equation of the Eq. (9) to obtain:
Here Fcross(ω0τC) is obtained for the particular case in which the protons of the bound water interact with only one proton belonging to the protein structure [22]. More general and inclusive cases give place to much more complex terms describing cross-relaxation contribution with non-analytical solutions [22].
If \(\tau_{res}^{in} ,\tau_{res}^{p}\) > > τR, then τC = τR in the equations for R1, βp and Fcross at the Eqs. (9) and (10) considering that:
where the superscript i can be referred to the internal water molecules, or to labile protons at the protein structure. In the specific case of α (Eq. (9)), the second term corresponds to intermolecular dipole couplings of the internal water molecules, in which τC=\(\tau_{c}^{in}\) is lower than 1 ns, thus contributing to the non-dispersive relaxation.
Rights and permissions
About this article
Cite this article
Guevara, M.A.L., Mirabal, C.A.C., Muller, R.N. et al. Proton MRD Profile Analysis in Intracellular Hemoglobin Solutions: A Three Sites Exchange Model Approach. Appl Magn Reson 53, 387–399 (2022). https://doi.org/10.1007/s00723-021-01452-w
Received:
Revised:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s00723-021-01452-w