Abstract
Whole-mount in situ hybridization (WISH) is a reliable and specific method to study three-dimensional patterns of gene expression. A labeled nucleic acid probe anneals to a complementary target sequence and is visualized and localized in the embryo. This chapter describes a sensitive method for WISH on mouse embryos using digoxigenin-labeled RNA probes. The technique can be used for the analysis of gene expression patterns during early stages of odontogenesis and in tooth explants.
Access this chapter
Tax calculation will be finalised at checkout
Purchases are for personal use only
Similar content being viewed by others
References
Rosen B. and Beddington R.S.P. (1993) Whole-mount in situ hybridization in the mouse embryo: gene expression in three dimensions. Trends in Genetics 9, 162–167.
Speel E. J. M., Ramaekers F. C. S., and Hopman A. H. N. (1997) Sensitive multicolor fluorescence in situ hybridization using catalyzed reporter deposition (CARD) amplification. J Histochem Cytochem 45, 1439–1446.
Clay H. and Ramakrishnan L. (2005) Multiplex fluorescent in situ hybridization in zebrafish embryos using tyramide signal amplification. Zebrafish 2, 105–111.
Hargrave M., Bowles J., and Koopman P. (2006) In situ hybridization of whole-mount embryos. Methods Mol Biol 326, 103–113.
Lowe L. A. and Kuehn M. R. (2000) Whole mount in situ hybridization to study gene expression during mouse development. Methods Mol Biol 137, 125–137.
Heiskanen M., Peltonen L., and Palotie A. (1996) Visual mapping by high resolution FISH. Trends in Genetics 12, 379–382.
Herrington C. S., Graham A. K., and McGee J. O’D. (1991) Interphase cytogenics J Clin Pathol 44, 33–38.
Correia K. M. and Conlon R. A. (2001) Whole-mount in situ hybridization to mouse embryos. Methods 23, 335–338.
Jowett T., Mancera M., Amores A., and Yan Y. (1996) In situ hybridization to embryo whole mounts and tissue sections: mRNA detection and application to developmental studies. In Situ Hybridization (Clark M., ed.), Chapman and Hall, London, UK, 91–121.
Piette D., Hendrickx M., Willems E., Kemp C. R., and Leyns L. (2008) An optimized procedure for whole-mount in situ hybridization on mouse embryos and embryoid bodies. Nature Protocols 3, 1194–1201.
Author information
Authors and Affiliations
Corresponding author
Editor information
Editors and Affiliations
Rights and permissions
Copyright information
© 2012 Springer Science+Business Media, LLC
About this protocol
Cite this protocol
Kyryachenko, S., Kyrylkova, K., Leid, M., Kioussi, C. (2012). Determination of Gene Expression Patterns by Whole-Mount In Situ Hybridization. In: Kioussi, C. (eds) Odontogenesis. Methods in Molecular Biology, vol 887. Humana Press. https://doi.org/10.1007/978-1-61779-860-3_2
Download citation
DOI: https://doi.org/10.1007/978-1-61779-860-3_2
Published:
Publisher Name: Humana Press
Print ISBN: 978-1-61779-859-7
Online ISBN: 978-1-61779-860-3
eBook Packages: Springer Protocols