Skip to main content

Isolation of Mitochondria from Model and Crop Plants

  • Protocol
  • First Online:
Plant Respiration and Internal Oxygen

Part of the book series: Methods in Molecular Biology ((MIMB,volume 1670))

Abstract

The ability to isolate intact and functional mitochondria has greatly deepened our understanding of mitochondrial structure and function. With the advancement of molecular biology techniques and progression into omics-based research over recent decades, mitochondrial research has shifted from crop species such as wheat, pea, and potato to genetically sequenced models such as Arabidopsis thaliana and rice. Although there are many attributes that make model species particularly appealing for plant research, they are often less than ideal for conducting biochemical investigations and as such, considerable modification to mitochondrial isolation methods has been made.

As the cost of genome sequencing continues to decrease however, an increasing number of crop species are now being sequenced and with these new resources it appears that the research community is turning back toward crop research. In this chapter we present mitochondrial isolation methods using density gradient centrifugation for both model species such as Arabidopsis thaliana, rice, and Medicago and crop species including wheat, potato, and pea. In addition, we present a number of marker enzyme assays to confirm mitochondrial purity as well as respiratory assays to determine outer membrane integrity and respiratory function of isolated mitochondria.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Subscribe and save

Springer+ Basic
$34.99 /Month
  • Get 10 units per month
  • Download Article/Chapter or eBook
  • 1 Unit = 1 Article or 1 Chapter
  • Cancel anytime
Subscribe now

Buy Now

Protocol
USD 49.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 119.00
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 159.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD 169.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

Similar content being viewed by others

References

  1. Ernster L, Schatz G (1981) Mitochondria: a historical review. J Cell Biol 91:227s–255s

    Article  CAS  PubMed  Google Scholar 

  2. Millerd A, Bonner J, Axelrod B et al (1951) Oxidative and phosphylative activity of plant mitochondria. PNAS 37:855–862

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  3. Neuburger M, Journet E-P, Bligny R et al (1982) Purification of plant mitochondria by isopycnic centrifugation in density gradients of Percoll. Arch Biochem Biophys 217:312–323

    Article  CAS  PubMed  Google Scholar 

  4. Eubel H, Lee CP, Kuo J et al (2007) Free-flow electrophoresis for purification of plant mitochondria by surface charge. Plant J 52:583–594

    Article  CAS  PubMed  Google Scholar 

  5. Sweetlove LJ, Taylor NL, Leaver CJ (2007) Isolation of intact, functional mitochondria from the model plant Arabidopsis thaliana. In: Leister D, Hermann JM (eds) Mitochondria: practical protocols, vol 372. Humana, Totowa, NJ, pp 125–136

    Chapter  Google Scholar 

  6. Day DA, Neuburger M, Douce R (1985) Biochemical characterization of chlorophyll-free mitochondria from pea leaves. Funct Plant Biol 12:219–228

    CAS  Google Scholar 

  7. Keech O, Dizengremel P, Gardeström P (2005) Preparation of leaf mitochondria from Arabidopsis thaliana. Physiol Plant 124:403–409

    Article  CAS  Google Scholar 

  8. Huang S, Taylor NL, Narsai R et al (2009) Experimental analysis of the rice mitochondrial proteome, its biogenesis, and heterogeneity. Plant Physiol 149:719–734

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  9. Dubinin J, Braun H-P, Schmitz U et al (2011) The mitochondrial proteome of the model legume Medicago truncatula. Biochim Biophys Acta 1814:1658–1668

    Article  CAS  PubMed  Google Scholar 

  10. Millar AH, Knorpp C, Leaver CJ et al (1998) Plant mitochondrial pyruvate dehydrogenase complex: purification and identification of catalytic components in potato. Biochem J 334:571–576

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  11. Jacoby RP, Millar AH, Taylor NL (2010) Wheat mitochondrial proteomes provide new links between antioxidant defense and plant salinity tolerance. J Proteome Res 9:6595–6604

    Article  CAS  PubMed  Google Scholar 

  12. Taylor NL, Day DA, Millar AH (2002) Environmental stress causes oxidative damage to plant mitochondria leading to inhibition of glycine decarboxylase. J Biol Chem 277:42663–42668

    Article  CAS  PubMed  Google Scholar 

  13. Aebersold R, Burlingame AL, Bradshaw RA (2013) Western blots versus selected reaction monitoring assays: time to turn the tables? Mol Cell Proteomics 12:2381–2382

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  14. Taylor NL, Millar AH (2015) Plant mitochondrial proteomics. In: Whelan J, Murcha WM (eds) Plant mitochondria: methods and protocols. Springer, New York, NY, pp 83–106

    Google Scholar 

  15. Sew YS, Ströher E, Holzmann C et al (2013) Multiplex micro-respiratory measurements of Arabidopsis tissues. New Phytol 200:922–932

    Article  CAS  PubMed  Google Scholar 

  16. Trapphoff T, Beutner C, Niehaus K et al (2009) Induction of distinct defense-associated protein patterns in Aphanomyces euteiches (Oomycota)–elicited and -inoculated Medicago truncatula cell-suspension cultures: a proteome and phosphoproteome approach. Mol Plant-Microbe Interact 22:421–436

    Article  CAS  PubMed  Google Scholar 

Download references

Acknowledgements

This work was supported by the ARC Centre of Excellence in Plant Energy Biology (CE140100008) and N.L.T. as an Australian Research Council Future Fellow (FT13010123). SMK is supported by an Australian Postgraduate Award and Grains research and Development Corporation (GRDC) Graduate Research Scholarship.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Nicolas L. Taylor .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2017 Springer Science+Business Media LLC

About this protocol

Cite this protocol

Kerbler, S.M., Taylor, N.L. (2017). Isolation of Mitochondria from Model and Crop Plants. In: Jagadis Gupta, K. (eds) Plant Respiration and Internal Oxygen. Methods in Molecular Biology, vol 1670. Humana Press, New York, NY. https://doi.org/10.1007/978-1-4939-7292-0_12

Download citation

  • DOI: https://doi.org/10.1007/978-1-4939-7292-0_12

  • Published:

  • Publisher Name: Humana Press, New York, NY

  • Print ISBN: 978-1-4939-7291-3

  • Online ISBN: 978-1-4939-7292-0

  • eBook Packages: Springer Protocols

Publish with us

Policies and ethics