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In Vivo Imaging of Axonal Organelle Transport in the Mouse Brain

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Axonal Transport

Abstract

Visualization and analysis of axonal organelle transport has been mostly conducted in vitro, using primary neuronal cell cultures, although more recently, intravital organelle imaging has been established in model organisms such as drosophila, zebrafish, and mouse. In this chapter, we describe a method to visualize axonal transport of cellular organelles such as dense core vesicles or mitochondria in the living mouse brain in order to study organelle transport in its native environment. We achieve this goal by injecting adeno-associated viruses expressing fluorescently tagged marker proteins into thalamic nuclei of mice, thereby transducing neurons that project to the surface of the brain. Axonal projections and trafficking of organelles can be imaged with a 2-photon microscope through a chronically implanted window in the mouse skull in anesthetized as well as awake mice.

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References

  1. Vitet H, Brandt V, Saudou F (2020) Traffic signaling: new functions of huntingtin and axonal transport in neurological disease. Curr Opin Neurobiol 63:122–130. https://doi.org/10.1016/j.conb.2020.04.001

    Article  CAS  PubMed  Google Scholar 

  2. Li XJ, Orr AL, Li S (2010) Impaired mitochondrial trafficking in Huntington’s disease. Biochim Biophys Acta 1802(1):62–65. https://doi.org/10.1016/j.bbadis.2009.06.008

    Article  CAS  PubMed  Google Scholar 

  3. Wang ZX, Tan L, Yu JT (2015) Axonal transport defects in Alzheimer’s disease. Mol Neurobiol 51(3):1309–1321. https://doi.org/10.1007/s12035-014-8810-x

    Article  CAS  PubMed  Google Scholar 

  4. Sorbara CD, Wagner NE, Ladwig A, Nikic I, Merkler D, Kleele T, Marinkovic P, Naumann R, Godinho L, Bareyre FM, Bishop D, Misgeld T, Kerschensteiner M (2014) Pervasive axonal transport deficits in multiple sclerosis models. Neuron 84(6):1183–1190. https://doi.org/10.1016/j.neuron.2014.11.006

    Article  CAS  PubMed  Google Scholar 

  5. Mattedi F, Vagnoni A (2019) Temporal control of axonal transport: the extreme case of organismal ageing. Front Cell Neurosci 13:393. https://doi.org/10.3389/fncel.2019.00393

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  6. Vagnoni A, Bullock SL (2016) A simple method for imaging axonal transport in aging neurons using the adult Drosophila wing. Nat Protoc 11(9):1711–1723. https://doi.org/10.1038/nprot.2016.112

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  7. Drerup CM, Nechiporuk AV (2016) In vivo analysis of axonal transport in zebrafish. Methods Cell Biol 131:311–329. https://doi.org/10.1016/bs.mcb.2015.06.007

    Article  PubMed  Google Scholar 

  8. Misgeld T, Kerschensteiner M, Bareyre FM, Burgess RW, Lichtman JW (2007) Imaging axonal transport of mitochondria in vivo. Nat Methods 4(7):559–561. https://doi.org/10.1038/nmeth1055

    Article  CAS  PubMed  Google Scholar 

  9. Takihara Y, Inatani M, Eto K, Inoue T, Kreymerman A, Miyake S, Ueno S, Nagaya M, Nakanishi A, Iwao K, Takamura Y, Sakamoto H, Satoh K, Kondo M, Sakamoto T, Goldberg JL, Nabekura J, Tanihara H (2015) In vivo imaging of axonal transport of mitochondria in the diseased and aged mammalian CNS. Proc Natl Acad Sci U S A 112(33):10515–10520. https://doi.org/10.1073/pnas.1509879112

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  10. Lewis TL Jr, Turi GF, Kwon SK, Losonczy A, Polleux F (2016) Progressive decrease of mitochondrial motility during maturation of cortical axons in vitro and in vivo. Curr Biol 26(19):2602–2608. https://doi.org/10.1016/j.cub.2016.07.064

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  11. Smit-Rigter L, Rajendran R, Silva CA, Spierenburg L, Groeneweg F, Ruimschotel EM, van Versendaal D, van der Togt C, Eysel UT, Heimel JA, Lohmann C, Levelt CN (2016) Mitochondrial dynamics in visual cortex are limited in vivo and not affected by axonal structural plasticity. Curr Biol 26(19):2609–2616. https://doi.org/10.1016/j.cub.2016.07.033

    Article  CAS  PubMed  Google Scholar 

  12. Sleigh JN, Tosolini AP, Schiavo G (2020) In vivo imaging of anterograde and retrograde axonal transport in rodent peripheral nerves. In: Babetto E (ed) Axon degeneration: methods and protocols. Springer, New York, NY, pp 271–292. https://doi.org/10.1007/978-1-0716-0585-1_20

    Chapter  Google Scholar 

  13. Dominguez N, van Weering JRT, Borges R, Toonen RFG, Verhage M (2018) Dense-core vesicle biogenesis and exocytosis in neurons lacking chromogranins A and B. J Neurochem 144(3):241–254. https://doi.org/10.1111/jnc.14263

    Article  CAS  PubMed  Google Scholar 

  14. Kitay BM, McCormack R, Wang Y, Tsoulfas P, Zhai RG (2013) Mislocalization of neuronal mitochondria reveals regulation of Wallerian degeneration and NMNAT/WLD(S)-mediated axon protection independent of axonal mitochondria. Hum Mol Genet 22(8):1601–1614. https://doi.org/10.1093/hmg/ddt009

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  15. Honnappa S, Gouveia SM, Weisbrich A, Damberger FF, Bhavesh NS, Jawhari H, Grigoriev I, van Rijssel FJ, Buey RM, Lawera A, Jelesarov I, Winkler FK, Wuthrich K, Akhmanova A, Steinmetz MO (2009) An EB1-binding motif acts as a microtubule tip localization signal. Cell 138(2):366–376. https://doi.org/10.1016/j.cell.2009.04.065

    Article  CAS  PubMed  Google Scholar 

  16. Knabbe J, Nassal JP, Verhage M, Kuner T (2018) Secretory vesicle trafficking in awake and anaesthetized mice: differential speeds in axons versus synapses. J Physiol 596(16):3759–3773. https://doi.org/10.1113/JP276022

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  17. Protzmann J, Jaiswal A, Rohr K, Kuner T, Cambridge S, Knabbe J (2019) Acute ethanol intoxication induces preferred loss of presynaptic boutons devoid of mitochondria in vivo. bioRxiv:536334. https://doi.org/10.1101/536334

  18. Schwenger DB, Kuner T (2010) Acute genetic perturbation of exocyst function in the rat calyx of held impedes structural maturation, but spares synaptic transmission. Eur J Neurosci 32(6):974–984. https://doi.org/10.1111/j.1460-9568.2010.07391.x

    Article  PubMed  Google Scholar 

  19. Schindelin J, Arganda-Carreras I, Frise E, Kaynig V, Longair M, Pietzsch T, Preibisch S, Rueden C, Saalfeld S, Schmid B, Tinevez JY, White DJ, Hartenstein V, Eliceiri K, Tomancak P, Cardona A (2012) Fiji: an open-source platform for biological-image analysis. Nat Methods 9(7):676–682. https://doi.org/10.1038/nmeth.2019

    Article  CAS  PubMed  Google Scholar 

  20. Dubbs A, Guevara J, Yuste R (2016) Moco: fast motion correction for calcium imaging. Front Neuroinform 10:6. https://doi.org/10.3389/fninf.2016.00006

    Article  PubMed  PubMed Central  Google Scholar 

  21. Holtmaat A, Bonhoeffer T, Chow DK, Chuckowree J, De Paola V, Hofer SB, Hubener M, Keck T, Knott G, Lee WC, Mostany R, Mrsic-Flogel TD, Nedivi E, Portera-Cailliau C, Svoboda K, Trachtenberg JT, Wilbrecht L (2009) Long-term, high-resolution imaging in the mouse neocortex through a chronic cranial window. Nat Protoc 4(8):1128–1144. https://doi.org/10.1038/nprot.2009.89

    Article  CAS  PubMed  PubMed Central  Google Scholar 

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Correspondence to Johannes Knabbe .

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Knabbe, J., Protzmann, J., Kuner, T. (2022). In Vivo Imaging of Axonal Organelle Transport in the Mouse Brain. In: Vagnoni, A. (eds) Axonal Transport. Methods in Molecular Biology, vol 2431. Humana, New York, NY. https://doi.org/10.1007/978-1-0716-1990-2_5

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  • DOI: https://doi.org/10.1007/978-1-0716-1990-2_5

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  • Publisher Name: Humana, New York, NY

  • Print ISBN: 978-1-0716-1989-6

  • Online ISBN: 978-1-0716-1990-2

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