Skip to main content

Structural and Functional Characterization of Schistosoma mansoni Cathepsin B1

  • Protocol
  • First Online:
Schistosoma mansoni

Part of the book series: Methods in Molecular Biology ((MIMB,volume 2151))

Abstract

Schistosomiasis caused by parasitic blood flukes of the genus Schistosoma is a global health problem with over 200 million people infected. Schistosoma mansoni cathepsin B1 (SmCB1) is a gut-associated protease critical for digestion of host blood proteins as a source of nutrients. SmCB1 is a validated drug target, and inhibitors of SmCB1 represent promising anti-schistosomals. A comprehensive structural and functional characterization of SmCB1 provides a starting point for the rational design of selective and potent SmCB1 inhibitors. Here, we report optimized protocols for (1) the production of recombinant SmCB1 in the Pichia pastoris expression system and its purification, (2) the measurement of SmCB1 activity and inhibition in a kinetic fluorescence assay, and (3) the preparation and crystallization of SmCB1 in complex with a model vinyl sulfone inhibitor, and the determination of its crystal structure.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Subscribe and save

Springer+ Basic
$34.99 /Month
  • Get 10 units per month
  • Download Article/Chapter or eBook
  • 1 Unit = 1 Article or 1 Chapter
  • Cancel anytime
Subscribe now

Buy Now

Protocol
USD 49.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 89.00
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 119.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD 169.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

Similar content being viewed by others

References

  1. Utzinger J, N'goran EK, Caffrey CR, Keiser J (2011) From innovation to application: social-ecological context, diagnostics, drugs and integrated control of schistosomiasis. Acta Trop 120(Suppl 1):S121–S137

    Article  Google Scholar 

  2. Caffrey CR (2007) Chemotherapy of schistosomiasis: present and future. Curr Opin Chem Biol 11(4):433–439

    Article  CAS  Google Scholar 

  3. Caffrey CR, Rohwer A, Oellien F, Marhofer RJ, Braschi S, Oliveira G, McKerrow JH, Selzer PM (2009) A comparative chemogenomics strategy to predict potential drug targets in the metazoan pathogen, Schistosoma mansoni. PLoS One 4(2):e4413

    Article  Google Scholar 

  4. Abdulla MH, Ruelas DS, Wolff B, Snedecor J, Lim KC, Xu F, Renslo AR, Williams J, McKerrow JH, Caffrey CR (2009) Drug discovery for schistosomiasis: hit and lead compounds identified in a library of known drugs by medium-throughput phenotypic screening. PLoS Negl Trop Dis 3(7):e478

    Article  Google Scholar 

  5. Rai G, Sayed AA, Lea WA, Luecke HF, Chakrapani H, Prast-Nielsen S, Jadhav A, Leister W, Shen M, Inglese J, Austin CP, Keefer L, Arner ES, Simeonov A, Maloney DJ, Williams DL, Thomas CJ (2009) Structure mechanism insights and the role of nitric oxide donation guide the development of oxadiazole-2-oxides as therapeutic agents against schistosomiasis. J Med Chem 52(20):6474–6483. https://doi.org/10.1021/jm901021k

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  6. Caffrey CR, McKerrow JH, Salter JP, Sajid M (2004) Blood 'n' guts: an update on schistosome digestive peptidases. Trends Parasitol 20(5):241–248

    Article  CAS  Google Scholar 

  7. Delcroix M, Sajid M, Caffrey CR, Lim KC, Dvorak J, Hsieh I, Bahgat M, Dissous C, McKerrow JH (2006) A multienzyme network functions in intestinal protein digestion by a platyhelminth parasite. J Biol Chem 281(51):39316–39329

    Article  CAS  Google Scholar 

  8. Sajid M, McKerrow JH, Hansell E, Mathieu MA, Lucas KD, Hsieh I, Greenbaum D, Bogyo M, Salter JP, Lim KC, Franklin C, Kim JH, Caffrey CR (2003) Functional expression and characterization of Schistosoma mansoni cathepsin B and its trans-activation by an endogenous asparaginyl endopeptidase. Mol Biochem Parasitol 131(1):65–75

    Article  CAS  Google Scholar 

  9. Abdulla MH, Lim KC, Sajid M, McKerrow JH, Caffrey CR (2007) Schistosomiasis mansoni: novel chemotherapy using a cysteine protease inhibitor. PLoS Med 4(1):e14

    Article  Google Scholar 

  10. Jilkova A, Rezacova P, Lepsik M, Horn M, Vachova J, Fanfrlik J, Brynda J, McKerrow JH, Caffrey CR, Mares M (2011) Structural basis for inhibition of Cathepsin B drug target from the human blood fluke, Schistosoma mansoni. J Biol Chem 286(41):35770–35781. https://doi.org/10.1074/jbc.M111.271304

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  11. Horn M, Jilkova A, Vondrasek J, Maresova L, Caffrey CR, Mares M (2011) Mapping the pro-peptide of the Schistosoma mansoni Cathepsin B1 drug target: modulation of inhibition by heparin and design of mimetic inhibitors. ACS Chem Biol 6(6):609–617. https://doi.org/10.1021/cb100411v

    Article  CAS  PubMed  Google Scholar 

  12. Fanfrlik J, Brahmkshatriya PS, Rezac J, Jilkova A, Horn M, Mares M, Hobza P, Lepsik M (2013) Quantum mechanics-based scoring rationalizes the irreversible inactivation of parasitic Schistosoma mansoni cysteine peptidase by vinyl sulfone inhibitors. J Phys Chem B 117(48):14973–14982. https://doi.org/10.1021/jp409604n

    Article  CAS  PubMed  Google Scholar 

  13. Jilkova A, Horn M, Rezacova P, Maresova L, Fajtova P, Brynda J, Vondrasek J, McKerrow JH, Caffrey CR, Mares M (2014) Activation route of the Schistosoma mansoni cathepsin B1 drug target: structural map with a glycosaminoglycan switch. Structure 22(12):1786–1798. https://doi.org/10.1016/j.str.2014.09.015

    Article  CAS  PubMed  Google Scholar 

  14. Stefanic S, Dvorak J, Horn M, Braschi S, Sojka D, Ruelas DS, Suzuki B, Lim KC, Hopkins SD, McKerrow JH, Caffrey CR (2010) RNA interference in Schistosoma mansoni schistosomula: selectivity, sensitivity and operation for larger-scale screening. PLoS Negl Trop Dis 4(10):e850. https://doi.org/10.1371/journal.pntd.0000850

  15. Caffrey CR, Mathieu MA, Gaffney AM, Salter JP, Sajid M, Lucas KD, Franklin C, Bogyo M, McKerrow JH (2000) Identification of a cDNA encoding an active asparaginyl endopeptidase of Schistosoma mansoni and its expression in Pichia pastoris. FEBS Lett 466(2–3):244–248

    Google Scholar 

Download references

Acknowledgments

This work was supported by the project InterBioMed LO1302 from the Ministry of Education, Youth and Sports of the Czech Republic, grant NV18-05-00345 from the Ministry of Health of the Czech Republic, and the institutional project RVO 61388963.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Adéla Jílková .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2020 Springer Science+Business Media, LLC, part of Springer Nature

About this protocol

Check for updates. Verify currency and authenticity via CrossMark

Cite this protocol

Jílková, A., Horn, M., Mareš, M. (2020). Structural and Functional Characterization of Schistosoma mansoni Cathepsin B1. In: Timson, D.J. (eds) Schistosoma mansoni. Methods in Molecular Biology, vol 2151. Humana, New York, NY. https://doi.org/10.1007/978-1-0716-0635-3_12

Download citation

  • DOI: https://doi.org/10.1007/978-1-0716-0635-3_12

  • Published:

  • Publisher Name: Humana, New York, NY

  • Print ISBN: 978-1-0716-0634-6

  • Online ISBN: 978-1-0716-0635-3

  • eBook Packages: Springer Protocols

Publish with us

Policies and ethics