Measuring Fit of Sequence Data to Phylogenetic Model: Gain of Power Using Marginal Tests Peter J. WaddellRissa OtaDavid Penny OriginalPaper 23 October 2009 Pages: 289 - 299
The Repertoire and Evolution of ATP-Binding Cassette Systems in Synechococcus and Prochlorococcus Lijing BuJian XiaoJinyu Wu OriginalPaper 16 September 2009 Pages: 300 - 310
The Complete Chloroplast Genome of Coix lacryma-jobi and a Comparative Molecular Evolutionary Analysis of Plastomes in Cereals Charles H. LesebergMelvin R. Duvall OriginalPaper 24 September 2009 Pages: 311 - 318
Phylogenetic Analysis of the NEEP21/Calcyon/P19 Family of Endocytic Proteins: Evidence for Functional Evolution in the Vertebrate CNS Nagendran MuthusamySanaa A. AhmedClare Bergson OriginalPaper 17 September 2009 Pages: 319 - 332
Using Non-Homogeneous Models of Nucleotide Substitution to Identify Host Shift Events: Application to the Origin of the 1918 ‘Spanish’ Influenza Pandemic Virus Mario dos ReisAlan J. HayRichard A. Goldstein OriginalPaper Open access 29 September 2009 Pages: 333 - 345
Distinct Evolutionary Patterns Between Two Duplicated Color Vision Genes Within Cyprinid Fishes Zhiqiang LiXiaoni GanShunping He OriginalPaper 17 October 2009 Pages: 346 - 359
The Evolution of RecD Outside of the RecBCD Complex Michael MontagueChristian BarnesSanjay Vashee OriginalPaper 20 October 2009 Pages: 360 - 371
Molecular Evolution of the mtDNA Encoded rps3 Gene Among Filamentous Ascomycetes Fungi with an Emphasis on the Ophiostomatoid Fungi Jyothi SethuramanAnna MajerGeorg Hausner OriginalPaper 14 October 2009 Pages: 372 - 385
Search for Primitive Methanopyrus Based on Genetic Distance Between Val- and Ile-tRNA Synthetases Zhiliang YuKen TakaiJ. Tze-Fei Wong OriginalPaper 20 October 2009 Pages: 386 - 394
Characterization of a Novel Tc1-Like Transposon From Bream (Cyprinidae, Megalobrama) and Its Genetic Variation in the Polyploidy Progeny of Bream–Red Crucian Carp Crosses Dong LiuCuiping YouYun Liu OriginalPaper 14 October 2009 Pages: 395 - 403