Volume 9, issue 1, December 2013
48 articles in this issue
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An efficient immunodetection method for histone modifications in plants
Authors (first, second and last of 5)
- Geovanny Nic-Can
- Sara Hernández-Castellano
- Clelia De-la-Peña
- Content type: Methodology
- Open Access
- Published: 16 December 2013
- Article: 47
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High-level diterpene production by transient expression in Nicotiana benthamiana
Authors
- Kathleen Brückner
- Alain Tissier
- Content type: Methodology
- Open Access
- Published: 12 December 2013
- Article: 46
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A device for single leaf labelling with CO2 isotopes to study carbon allocation and partitioning in Arabidopsis thaliana
Authors (first, second and last of 4)
- Katharina Kölling
- Antonia Müller
- Samuel C Zeeman
- Content type: Methodology
- Open Access
- Published: 19 November 2013
- Article: 45
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An R package for SNP marker-based parent-offspring tests
Authors (first, second and last of 4)
- Hussein Abdel-Haleem
- Pengsheng Ji
- Zenglu Li
- Content type: Software
- Open Access
- Published: 19 November 2013
- Article: 44
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Validation of doubled haploid plants by enzymatic mismatch cleavage
Authors (first, second and last of 7)
- Bernhard J Hofinger
- Owen A Huynh
- Bradley J Till
- Content type: Methodology
- Open Access
- Published: 13 November 2013
- Article: 43
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Dissecting organ-specific transcriptomes through RNA-sequencing
Authors
- Shan Guan
- Yingqing Lu
- Content type: Methodology
- Open Access
- Published: 25 October 2013
- Article: 42
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Vacuum Seed Sowing Manifold: a novel device for high-throughput sowing of Arabidopsis seeds
Authors (first, second and last of 4)
- Richard Barker
- Benjamin Cox
- Patrick Masson
- Content type: Methodology
- Open Access
- Published: 22 October 2013
- Article: 41
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Cell surface and cell outline imaging in plant tissues using the backscattered electron detector in a variable pressure scanning electron microscope
Authors
- Mark J Talbot
- Rosemary G White
- Content type: Methodology
- Open Access
- Published: 17 October 2013
- Article: 40
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Plant genome editing made easy: targeted mutagenesis in model and crop plants using the CRISPR/Cas system
Authors (first, second and last of 4)
- Khaoula Belhaj
- Angela Chaparro-Garcia
- Vladimir Nekrasov
- Content type: Review
- Open Access
- Published: 11 October 2013
- Article: 39
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An online database for plant image analysis software tools
Authors
- Guillaume Lobet
- Xavier Draye
- Claire Périlleux
- Content type: Database
- Open Access
- Published: 09 October 2013
- Article: 38
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Novel applications of motif-directed profiling to identify disease resistance genes in plants
Authors (first, second and last of 8)
- Jack H Vossen
- Sara Dezhsetan
- C Gerard van der Linden
- Content type: Methodology
- Open Access
- Published: 07 October 2013
- Article: 37
This is part of 1 collection: -
Methanol fixation of plant tissue for Scanning Electron Microscopy improves preservation of tissue morphology and dimensions
Authors
- Mark J Talbot
- Rosemary G White
- Content type: Methodology
- Open Access
- Published: 02 October 2013
- Article: 36
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Analysing complex Triticeae genomes – concepts and strategies
Authors (first, second and last of 5)
- Manuel Spannagl
- Mihaela M Martis
- Klaus FX Mayer
- Content type: Review
- Open Access
- Published: 06 September 2013
- Article: 35
This is part of 1 collection: -
A valid strategy for precise identifications of transcription factor binding sites in combinatorial regulation using bioinformatic and experimental approaches
Authors (first, second and last of 5)
- Hailong Wang
- Shan Guan
- Yingqing Lu
- Content type: Methodology
- Open Access
- Published: 24 August 2013
- Article: 34
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Controlled vocabularies for plant anatomical parts optimized for use in data analysis tools and for cross-species studies
Authors (first, second and last of 7)
- Rasa Meskauskiene
- Oliver Laule
- Philip Zimmermann
- Content type: Software
- Open Access
- Published: 06 August 2013
- Article: 33
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A high-throughput seed germination assay for root parasitic plants
Authors (first, second and last of 7)
- Jean-Bernard Pouvreau
- Zachary Gaudin
- Philippe Simier
- Content type: Methodology
- Open Access
- Published: 06 August 2013
- Article: 32
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Protocol: Optimised methodology for isolation of nuclei from leaves of species in the Solanaceae and Rosaceae families
Authors (first, second and last of 5)
- Sidona Sikorskaite
- Minna-Liisa Rajamäki
- Jari PT Valkonen
- Content type: Methodology
- Open Access
- Published: 26 July 2013
- Article: 31
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Diel leaf growth of soybean: a novel method to analyze two-dimensional leaf expansion in high temporal resolution based on a marker tracking approach (Martrack Leaf)
Authors (first, second and last of 4)
- Michael Mielewczik
- Michael Friedli
- Achim Walter
- Content type: Methodology
- Open Access
- Published: 25 July 2013
- Article: 30
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The advantages and limitations of trait analysis with GWAS: a review
Authors
- Arthur Korte
- Ashley Farlow
- Content type: Review
- Open Access
- Published: 22 July 2013
- Article: 29
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A Narcissus mosaic viral vector system for protein expression and flavonoid production
Authors (first, second and last of 6)
- Huaibi Zhang
- Lei Wang
- Kevin Davies
- Content type: Methodology
- Open Access
- Published: 13 July 2013
- Article: 28
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Quantifying remobilization of pre-existing nitrogen from cuttings to new growth of woody plants using 15N at natural abundance
Authors
- Lee A Kalcsits
- Robert D Guy
- Content type: Methodology
- Open Access
- Published: 12 July 2013
- Article: 27
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The value and use of social media as communication tool in the plant sciences
Authors
- Anne Osterrieder
- Content type: Commentary
- Open Access
- Published: 11 July 2013
- Article: 26
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Genetic transformation of western clover (Trifolium occidentale D. E. Coombe.) as a model for functional genomics and transgene introgression in clonal pasture legume species
Authors (first, second and last of 4)
- Kim A Richardson
- Dorothy A Maher
- Greg Bryan
- Content type: Methodology
- Open Access
- Published: 10 July 2013
- Article: 25
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Wax ester profiling of seed oil by nano-electrospray ionization tandem mass spectrometry
Authors (first, second and last of 8)
- Tim Iven
- Cornelia Herrfurth
- Ivo Feussner
- Content type: Methodology
- Open Access
- Published: 06 July 2013
- Article: 24
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Frontiers of torenia research: innovative ornamental traits and study of ecological interaction networks through genetic engineering
Authors (first, second and last of 4)
- Masahiro Nishihara
- Takeshi Shimoda
- Gen-ichiro Arimura
- Content type: Review
- Open Access
- Published: 26 June 2013
- Article: 23
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A simple in vitro method to measure autophosphorylation of protein kinases
Authors (first, second and last of 4)
- Isaiah Taylor
- Kati Seitz
- John C Walker
- Content type: Methodology
- Open Access
- Published: 26 June 2013
- Article: 22
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A fluorometric assay for trehalose in the picomole range
Authors (first, second and last of 8)
- Petronia Carillo
- Regina Feil
- John Edward Lunn
- Content type: Methodology
- Open Access
- Published: 20 June 2013
- Article: 21
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A light in the shadow: the use of Lucifer Yellow technique to demonstrate nectar reabsorption
Authors (first, second and last of 4)
- Poliana Cardoso-Gustavson
- João Marcelo Robazzi Bignelli Valente Aguiar
- Fábio de Barros
- Content type: Methodology
- Open Access
- Published: 19 June 2013
- Article: 20
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Simple extraction methods that prevent the artifactual conversion of chlorophyll to chlorophyllide during pigment isolation from leaf samples
Authors
- Xueyun Hu
- Ayumi Tanaka
- Ryouichi Tanaka
- Content type: Methodology
- Open Access
- Published: 19 June 2013
- Article: 19
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Improved techniques for measurement of nanolitre volumes of phloem exudate from aphid stylectomy
Authors (first, second and last of 5)
- Lachlan J Palmer
- Lyndon T Palmer
- James CR Stangoulis
- Content type: Methodology
- Open Access
- Published: 17 June 2013
- Article: 18
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High throughput quantitative phenotyping of plant resistance using chlorophyll fluorescence image analysis
Authors (first, second and last of 10)
- Céline Rousseau
- Etienne Belin
- Tristan Boureau
- Content type: Methodology
- Open Access
- Published: 13 June 2013
- Article: 17
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High-throughput sequencing of cytosine methylation in plant DNA
Authors
- Thomas J Hardcastle
- Content type: Review
- Open Access
- Published: 07 June 2013
- Article: 16
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Simultaneous molecular formula determinations of natural compounds in a plant extract using 15 T Fourier transform ion cyclotron resonance mass spectrometry
Authors (first, second and last of 9)
- Kyu Hwan Park
- Min Sun Kim
- Hyun Sik Kim
- Content type: Methodology
- Open Access
- Published: 30 May 2013
- Article: 15
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An efficient flat-surface collar-free grafting method for Arabidopsis thaliana seedlings
Authors (first, second and last of 6)
- Nayelli Marsch-Martínez
- John Franken
- Elena R Alvarez-Buylla
- Content type: Methodology
- Open Access
- Published: 04 May 2013
- Article: 14
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A selective pretreatment method for determination of endogenous active brassinosteroids in plant tissues: double layered solid phase extraction combined with boronate affinity polymer monolith microextraction
Authors (first, second and last of 4)
- Jun Ding
- Li-Jing Mao
- Yu-Qi Feng
- Content type: Methodology
- Open Access
- Published: 18 April 2013
- Article: 13
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Using an ensemble of statistical metrics to quantify large sets of plant transcription factor binding sites
Authors
- Parsa Hosseini
- Ivan Ovcharenko
- Benjamin F Matthews
- Content type: Software
- Open Access
- Published: 11 April 2013
- Article: 12
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Visualizing water-filled versus embolized status of xylem conduits by desktop x-ray microtomography
Authors (first, second and last of 4)
- Jussi-Petteri Suuronen
- Marko Peura
- Ritva Serimaa
- Content type: Methodology
- Open Access
- Published: 08 April 2013
- Article: 11
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Emission spectra profiling of fluorescent proteins in living plant cells
Authors (first, second and last of 4)
- Evelien Mylle
- Mirela-Corina Codreanu
- Eugenia Russinova
- Content type: Methodology
- Open Access
- Published: 03 April 2013
- Article: 10
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Rapid separation of developing Arabidopsis seeds from siliques for RNA or metabolite analysis
Authors
- Philip David Bates
- Jeremy Burke Jewell
- John Browse
- Content type: Methodology
- Open Access
- Published: 26 March 2013
- Article: 9
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Recovering complete plant root system architectures from soil via X-ray μ-Computed Tomography
Authors (first, second and last of 7)
- Stefan Mairhofer
- Susan Zappala
- Tony Paul Pridmore
- Content type: Software
- Open Access
- Published: 20 March 2013
- Article: 8
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A novel system for in situ determination of heat tolerance of plants: first results on alpine dwarf shrubs
Authors (first, second and last of 4)
- Othmar Buchner
- Matthias Karadar
- Gilbert Neuner
- Content type: Methodology
- Open Access
- Published: 14 March 2013
- Article: 7
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Advances in plant gene-targeted and functional markers: a review
Authors (first, second and last of 7)
- Péter Poczai
- Ildikó Varga
- Jaakko Hyvönen
- Content type: Review
- Open Access
- Published: 13 February 2013
- Article: 6
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Accounting for variation in designing greenhouse experiments with special reference to greenhouses containing plants on conveyor systems
Authors (first, second and last of 4)
- Chris J Brien
- Bettina Berger
- Mark Tester
- Content type: Methodology
- Open Access
- Published: 08 February 2013
- Article: 5
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Protocol: optimising hydroponic growth systems for nutritional and physiological analysis of Arabidopsis thaliana and other plants
Authors (first, second and last of 12)
- Simon J Conn
- Bradleigh Hocking
- Matthew Gilliham
- Content type: Methodology
- Open Access
- Published: 05 February 2013
- Article: 4
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Rhizo-lysimetry: facilities for the simultaneous study of root behaviour and resource use by agricultural crop and pasture systems
Authors (first, second and last of 5)
- Philip L Eberbach
- Jeffrey Hoffmann
- Leslie A Weston
- Content type: Methodology
- Open Access
- Published: 31 January 2013
- Article: 3
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Synchronous high-resolution phenotyping of leaf and root growth in Nicotiana tabacum over 24-h periods with GROWMAP-plant
Authors
- Tom Ruts
- Shizue Matsubara
- Achim Walter
- Content type: Methodology
- Open Access
- Published: 23 January 2013
- Article: 2
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Novel scanning procedure enabling the vectorization of entire rhizotron-grown root systems
Authors
- Guillaume Lobet
- Xavier Draye
- Content type: Methodology
- Open Access
- Published: 04 January 2013
- Article: 1