Volume 17, supplement issue 1, January 2016
Selected articles from the Fourteenth Asia Pacific Bioinformatics Conference (APBC 2016): Genomics
- Issue editor
-
- Phoebe Chen
15 articles in this issue
-
-
A maximum-likelihood approach for building cell-type trees by lifting
Authors (first, second and last of 7)
- Nishanth Ulhas Nair
- Laura Hunter
- Bernard M. E. Moret
- Content type: PROCEEDINGS
- Open Access
- Published: 11 January 2016
- Article: 14
-
Comprehensive prediction of lncRNA–RNA interactions in human transcriptome
Authors (first, second and last of 5)
- Goro Terai
- Junichi Iwakiri
- Kiyoshi Asai
- Content type: PROCEEDINGS
- Open Access
- Published: 11 January 2016
- Article: 12
-
NMFP: a non-negative matrix factorization based preselection method to increase accuracy of identifying mRNA isoforms from RNA-seq data
Authors
- Yuting Ye
- Jingyi Jessica Li
- Content type: PROCEEDINGS
- Open Access
- Published: 11 January 2016
- Article: 11
-
SOHSite: incorporating evolutionary information and physicochemical properties to identify protein S-sulfenylation sites
Authors (first, second and last of 6)
- Van-Minh Bui
- Shun-Long Weng
- Tzong-Yi Lee
- Content type: Proceedings
- Open Access
- Published: 11 January 2016
- Article: 9
-
Identification of miRNA-mRNA regulatory modules by exploring collective group relationships
Authors (first, second and last of 4)
- S. M. Masud Karim
- Lin Liu
- Jiuyong Li
- Content type: Research
- Open Access
- Published: 11 January 2016
- Article: 7
-
Medoidshift clustering applied to genomic bulk tumor data
Authors
- Theodore Roman
- Lu Xie
- Russell Schwartz
- Content type: PROCEEDINGS
- Open Access
- Published: 11 January 2016
- Article: 6
-
RDDpred: a condition-specific RNA-editing prediction model from RNA-seq data
Authors
- Min-su Kim
- Benjamin Hur
- Sun Kim
- Content type: PROCEEDINGS
- Open Access
- Published: 11 January 2016
- Article: 5
-
Identifying micro-inversions using high-throughput sequencing reads
Authors (first, second and last of 5)
- Feifei He
- Yang Li
- Huaiqiu Zhu
- Content type: Proceedings
- Open Access
- Published: 11 January 2016
- Article: 4
-
Power estimation and sample size determination for replication studies of genome-wide association studies
Authors
- Wei Jiang
- Weichuan Yu
- Content type: Methodology
- Open Access
- Published: 11 January 2016
- Article: 3
-
A Bayesian approach for estimating allele-specific expression from RNA-Seq data with diploid genomes
Authors (first, second and last of 5)
- Naoki Nariai
- Kaname Kojima
- Masao Nagasaki
- Content type: PROCEEDINGS
- Open Access
- Published: 11 January 2016
- Article: 2
-
Locating rearrangement events in a phylogeny based on highly fragmented assemblies
Authors
- Chunfang Zheng
- David Sankoff
- Content type: Research
- Open Access
- Published: 11 January 2016
- Article: S1
-
Mapping the genomic architecture of adaptive traits with interspecific introgressive origin: a coalescent-based approach
Authors
- Hussein A. Hejase
- Kevin J. Liu
- Content type: PROCEEDINGS
- Open Access
- Published: 11 January 2016
- Article: S8
-
Epigenome overlap measure (EPOM) for comparing tissue/cell types based on chromatin states
Authors
- Wei Vivian Li
- Zahra S. Razaee
- Jingyi Jessica Li
- Content type: PROCEEDINGS
- Open Access
- Published: 11 January 2016
- Article: S10
-
Transcriptome sequencing based annotation and homologous evidence based scaffolding of Anguilla japonica draft genome
Authors (first, second and last of 12)
- Yu-Chen Liu
- Sheng-Da Hsu
- Hsien-Da Huang
- Content type: Proceedings
- Open Access
- Published: 11 January 2016
- Article: S13