Abstract
Bactrocera (Tetradacus) minax Enderlein is a major pest to wild and cultivated species of citrus. Bactrocera minax produces one generation per year with a long pupal diapause period of over 6 months, which hinders efforts to obtain vast numbers of insects under standard room conditions. Determining the mechanisms of diapause is significantly important for obtaining large quantities of these insects. To characterize the heat shock protein (Hsp) genes of B. minax and to unravel their potential contribution to diapause, we performed 3′ and 5′ RACE to isolate the complementary DNA (cDNA) sequences, bioinformatics to examine the phylogenetic relationships, and real-time quantitative PCR to detect the expression patterns of three Hsp genes during various developmental stages. These results represent the first characterization of the three Hsp genes of B. minax; the open reading frames of Bmhsp23, Bmhsp70, and Bmhsp90 were 510, 1,911, and 1,089 bp, encoding 170, 636, and 363 amino acids, respectively. BmHsp70 and BmHsp90 displayed high identity to previously identified Hsp70 and Hsp90 genes, respectively. BmHsp23 displayed varying similarity, from 28 to 83%, to previously identified small Hsps. Bmhsp23 messenger RNA (mRNA) expression was found to be upregulated during diapause initiation, maintenance, and termination. Bmhsp70 mRNA expression peaked during diapause initiation. Bmhsp90 mRNA expression remained at a relatively low level during deep diapause. Our present results suggest that Bmhsp70 might play an important role in diapause initiation, while Bmhsp23 in diapause initiation and maintenance and Bmhsp90 in diapause regulation. These results improve our understanding of the mechanism of diapause in B. minax at the molecular level.
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Introduction
Bactrocera (Tetradacus) minax Enderlein (Diptera: Tephritidae; Chinese citrus fruit fly) is unique with respect to its feeding behavior and its reproductive rate of one generation per year (van Schoubroeck 1999). Bactrocera minax has been causing considerable losses in commercial citrus for more than half a century in China (Wang & Luyi 1995). A series of strategies, including spraying of chemical pesticides and food attractants (Yang et al 1994, Wang & Luyi 1995, van Schoubroeck 1999), has been used to manage this pest. However, these measures have not effectively reduced its population density. Studies have revealed that the sterile insect/male technique (SIT) (Wang & Zhang 1993) and the genetic transformation technique play important roles in the prevention and control of fruit fly pests (Wimmer 2003, Vreysen et al 2007). The SIT and the genetic transformation technique have good potential to prevent and control B. minax, as the pest is unique with respect to its feeding behavior and its reproductive rate of one generation per year. However, B. minax exhibits a long period for pupa development (more than 6 months), which hinders the production of large quantities of these insects. Therefore, understanding and breaking diapause is a key step to obtain vast numbers of insects by producing two or more generations per year, which is important for the development of new techniques to control this pest.
Diapause is a common developmental strategy used by insects to survive winter and other periods of seasonal adversity (Xu 2008, Denlinger et al 2007). Bactrocera minax survives winter via pupa diapause from late October to late April or even early May (Wang & Luyi 1995). The mechanism of insect diapause is complex, and understanding the molecular mechanism involved in diapause initiation and regulation will provide the basic information required to break diapause. Insect diapause may be regulated by environmental, hormonal, and molecular factors, and understanding this molecular regulation remains in its infancy (Denlinger 2002, Xu 2008).
A number of diapause-specific genes have been identified based on their expression patterns during early, mid- and/or late diapause (Denlinger 2002, Xu 2008). Regulation of a subset of heat shock protein (Hsp) genes may be related to different types of insect diapause (Denlinger 2002, MacRae 2010, Xiao et al 2011). Hsps are a highly conserved superfamily of molecular chaperones that facilitate appropriate protein folding and localization while preventing protein aggregation (Feder & Hofmann 1999, Hartl & Hayer-Hartl 2002). Previous studies have demonstrated that Hsps play a major role in diapause regulation in a wide range of organisms (Yuan et al 1996, Denlinger et al 2001, Qiu & MacRae 2008a, b, MacRae 2010). During diapause, Hsps are thought to contribute to cell cycle arrest and increased stress resistance (Denlinger et al 2001, Rinehart et al 2007, MacRae 2010). Hsp gene expression patterns during diapause may be highly variable between species (Rinehart & Denlinger 2000, Denlinger et al 2001, Yocum 2001, Tungjitwitayakul et al 2008). Different classes of Hsps can play distinct roles in diapause within a species (Goto et al 1998, Rinehart & Denlinger 2000, Rinehart et al 2000, 2007, Goto & Kimura 2004, Aruda et al 2011). The characteristics of Hsp genes and their mRNA expression profiles in B. minax, as well as the relationship between Hsp gene expression and diapause, remain unknown.
To unravel the potential contribution of Hsp genes to diapause in B. minax, we hypothesized that different Hsp genes play distinct roles in regulating B. minax diapause. In this study, we isolated cDNA sequences from three Hsp genes, and examined the expression patterns of these Hsp genes during various developmental stages. We also examined the phylogenetic relationships between these Hsps by comparing them with Hsps from other insect taxa. This study represented the first characterization of Hsp genes in B. minax and their expression patterns during different stages of diapause. The present results improve our understanding of the mechanism of diapause in B. minax at the molecular level.
Material and Methods
Insects
Bactrocera (Tetradacus) minax eggs were collected from citrus plants in Zhangjiachong cun Jingzhou, Hubei province in August 2011. The eggs in the citrus plants were placed at 26 ± 1°C with a 12L:12D photoperiod for hatching. Newly hatched larvae were reared in citrus plants in the laboratory. The late third instars jumped into bottles filled with fine sand containing a moisture content of 10–15%. The third late instars pupated in the fine sand and were then transferred to 17 ± 1°C with a 12 L:12D photoperiod until adult eclosion.
Sampling at various developmental stages
Diapause is generally separated into three stages: prediapause, diapause, and postdiapause (Denlinger 2002, Xu 2008). Prediapause includes the induction and preparation phases. First, it was generally considered based on our observations that prediapause in B. minax corresponded to organisms from second instars to 30-day pupa. We regarded the period from about the second instar to the first pupal day as the induction phase and the period from about the first to the 30th pupal day as the preparation phase. Diapause included the initiation, maintenance, and termination phases. Diapause of B. minax was about from 30- to 150-day pupa. It was considered that diapause initiation occurred at about day 30, diapause maintenance occurred from day 30 to day 120, and diapause termination occurred from day 120 to day 150. Based on these considerations, we choose every tenth day during the diapause termination phase to measure the exact termination time based on the dynamics of Hsp gene expression. Finally, postdiapause comprised organisms from approximately 150- to 160-day-old pupae. Collectively, based on the various possible time points corresponding to each diapause stage, and to reveal the exact timing of each diapause stage at the molecular level, the following time points were chosen to examine the expression profile of Hsp genes: eggs and first, second, and third instars; 1, 7, 30, 60, 90, 120, 130, 140, 150, and 160-day-old pupae; and newly emerged adults (<24 h). Three replicates were performed for each time point.
Reverse transcription PCR and rapid amplification of cDNA ends
Total RNA was isolated using the RNeasy Mini Kit (QIAGEN, Valencia, CA, USA), and 2 μg RNA was used to generate the cDNA using the oligo(dT)15 primer according to the instructions provided with the reverse transcription system (Invitrogen Life Technologies, Burlington, ON, Canada). Degenerate primers (Table 1) were used to amplify partial segments of the Hsp genes. Then, 5′ and 3′ rapid amplification of cDNA ends (RACE) were performed to obtain full-length cDNAs according to the manufacturer’s instructions (Rapid Amplification of cDNA Ends System, version 2.0, Invitrogen, Carlsbad, CA, USA) using gene-specific primers corresponding to GSP1 and GSP2 (Table 1). To ensure that the 5′ and 3′ fragments were derived from the same gene, specific primer sets flanking the open reading frames (ORFs) were designed and used to amplify the full-length cDNAs.
Sequence analysis of hsp cDNA
The hsp cDNAs from other species were used as query sequences to search for alternative insect Hsp genes in the GenBank database using the BLAST software available on the NCBI website (http://www.ncbi.nlm.gov/BLAST/). Sequence alignment and identity analyses were performed using DNAMAN (version 5.0, Lynnon BioSoft, Quebec, Canada). The ORFs were identified using ORF Finder (http://www.ncbi.nlm.nih.gov/gorf/gorf.html). The amino acid sequences and the molecular weight of the proteins were calculated using DNASTAR. The accession numbers of Bmhsp23, Bmhsp70, and Bmhsp90 are KJ541737, KJ541738, and KJ541739, respectively.
Homology and phylogenetic analyses
To evaluate the molecular evolutionary relationship of Hsps from various insects, phylogenetic trees were constructed based on their protein sequences. Sequence homology searches were performed using BLAST, and all sequences were retrieved from GenBank using BLAST-N and BLAST-X. The retrieved sequences were aligned using the multiple alignment tool of the ClustalX program. Gaps and missing data were excluded from the data analysis. MEGA 5.1 was used to perform the tree calculations. The tree constructions were performed using the maximum parsimony method. Support for the nodes was assessed as a proportion of 1,000 bootstrap replicates to derive the confidence values of the phylogeny analysis.
Real-time quantitative PCR
Total RNA from the samples was extracted using the RNeasy Mini Kit (QIAGEN, Valencia, CA, USA), and the RNase-Free Set (QIAGEN, USA) was used to remove genomic DNA. The quantity and quality of the RNA were assessed via spectrophotometry (Beckman Du 650 spectrophotometer, Fullerton, CA, USA), and the A260/A280 ratios were typically above 1.8. The RNA quality was also evaluated via 1% agarose gel electrophoresis. According to the manufacturer’s instructions, 2 μg total RNA was used to synthesize cDNAs using the SuperScriptTM III Reverse transcriptase kit (Invitrogen Life Technologies, Burlington, ON, Canada). The cDNA was stored at −80°C until further analysis.
The mRNA expression levels of hsp23, hsp70, and hsp90 from eggs, larvae, pupae, and adults were examined via quantitative real-time PCR analysis. The sequences of the primers are listed in Table 1. The reactions were performed using an iQTM 5 real-time PCR detection system (BioRad, Foster City, CA, USA). The amplification volume was 20 μL, including 0.5 μL of the forward primer (10 mM/μL), 0.5 μL of the reverse primer (10 mM/μL), 10.0 μL of SYBR Mix, 0.4 μL of Rox, 1.0 μL of the cDNA sample, and 7.6 μL of ultra-pure water. The PCR cycle conditions were as follows: 94°C for 5 min, followed by 40 cycles of amplification consisting of 94°C for 30 s, 58°C for 30 s, and 72°C for 1 min, and then 72°C for 10 min. After the amplification phase, a dissociation curve was generated to ensure that there was only one product. A control without any template was included in all batches. The amplification efficiency of each gene was validated by constructing a standard curve using five serial dilutions of cDNA. The data were analyzed based on the Cp method according to the mathematical model of Pfaffl (2001), simplified to 2△△Ct as follows:
Eggs were used as a control, and alpha-tubulin (α-TUB) was used as the reference gene based on our preliminary experiments, which revealed that α-TUB was stably expressed throughout the various developmental stages (unpublished data). The relative expression level of each hsp mRNA was defined as the fold-change normalized to the amount of α-TUB. Each sample was assessed in triplicate.
Statistical analyses
Statistical analyses were performed using the SPSS software package (version 13). Prior to all statistical analyses, the data were examined with respect to assumptions of normality using the Kolmogorov-Smirnov test. The Hsp gene expression levels on the different development stages were analyzed using one-way ANOVA followed by the least significant difference (LSD) test (p values ≤0.05).
Results and Discussion
Cloning, characterization and homology, phylogenetic, and expression profile analyses of Bmhsp23
The full-length cDNA of B. minax hsp23 (Bmhsp23) is 805 bp, including a 5′-terminal UTR of 136 bp, a 3′-terminal UTR of 164 bp containing a poly(A) tail, and an ORF of 510 bp encoding a polypeptide of 170 amino acids with a predicted molecular mass of 19.03 kDa and a theoretical isoelectric point of 6.10 (Fig 1). The typical α crystal domains of sHsps were located from amino acid positions 49 to 131. In addition, homology analysis revealed that the deduced amino acid sequence of BmHsp23 displayed varying similarity, from 28 to 83%, to previously identified sHsps (Supplementary Material Table 1). Furthermore, as shown in Fig 2, Hsps in the order Diptera are differentiated into two clusters, and an orthologous cluster contained several sHsps from different insect orders, which suggested that these sHsps evolved prior to species divergence (Kokolakis et al 2008, Liu et al 2012).
The small heat shock protein gene is an important diapause regulatory gene. A possible role for sHsp genes in diapause is their involvement in the regulation of cell cycle arrest (Tammariello & Denlinger 1998). It was reported that sHsps were upregulated during diapause in a variety of insect species (Rinehart et al 2007), which suggested that sHsps are key players in the overwintering response of many insects (Gkouvitsas et al 2008). The sHsp mRNA expression level peaked in diapause pupae of Plutella xylostella Linnaeus and Lactuca sativa Linnaeus (Sonoda et al 2006, Huang et al 2009). Aruda et al (2011) found that the hsp22 expression level was elevated during deep diapause in Calanus finmarchicus Gunnerus. The Hsp23 gene was highly upregulated during Sarcophaga crassipalpis diapause and was implicated in diapause entry (Rinehart et al 2007). Different sHsp genes displayed distinct functions in Sesamia nonagrioides Lefèbvre, and it was found that SnoHsp19.5 mRNA was consistently expressed throughout diapause, whereas SnoHsp20.8 mRNA was downregulated during mid-diapause and was upregulated upon diapause termination (Gkouvitsas et al 2008). In the present study, Bmhsp23 mRNA expression was significantly different among the developmental stages of B. minax studied (F 14,71 = 2.519, p = 0.007) (Fig 3 a). Bmhsp23 expression was upregulated during diapause initiation, maintenance, and termination, suggesting it plays a key role during diapause.
Cloning, characterization and homology, phylogenetic, and expression profile analyses of Bmhsp70
The full-length cDNA of the Bmhsp70 was 2262 bp long, including a 5′-UTR of 178 bp, a 3′-UTR of 180 bp containing a poly(A) tail, and an ORF of 1,911 bp encoding a polypeptide of 636 amino acids with a predicted molecular mass of 69.42 kDa and a theoretical isoelectric point of 5.36 (Fig 4). The IDLGTTYS and DLGGGTFD motifs were located at amino acid positions 6–13 and 196–203, respectively. The nonorganellar conserved motif RARFEEL was located at amino acid positions 297 to 303. The end of BmHsp70 was characteristic of the cytosolic Hsp70-specific EEVD motif. The predicted ATP-GTP binding domain was AEAYLGTT, which was located at amino acid positions 128 to 135 (Fig 4). Additionally, homology analysis revealed that the deduced amino acid sequence of BmHsp70 displayed high identity, from 70 to 96%, to the previously identified inducible Hsp70 (Supplementary Material Table 2) and that the sequence was highly conserved. Furthermore, as shown in Fig 5, the inducible Hsp70 from insects of the same order were clustered into the same group, which was consistent with traditional taxonomy.
The role of hsp70 in mediating diapause varied greatly among insect taxa. For example, changes in hsp70 expression were not a factor in Lucilia sericata Wiedemann larval diapauses (Tachibana et al 2005), Helicoverpa zea Boddie pupal diapause (Zhang & Denlinger 2009) or Drosophila triauraria Bock & Wheeler adult diapause (Goto et al 1998).
Hsp70 mRNA expression decreased upon diapause initiation in Omphisa fuscidentalis Hampson and remained lower at the pupal stage, which indicated that hsp70 was not associated with O. fuscidentalis diapause (Tungjitwitayakul et al 2008). In S. nonagrioides, hsp70 expression was downregulated during larval diapause (Gkouvitsas et al 2009). However, hsp70 expression was strongly induced during Megachile rotundata Fabricius pupal diapause (Yocum et al 2005). In the present study, we found that Bmhsp70 expression was significantly different between various developmental stages (F 14,69 = 12.225, p < 0.001) (Fig 3 b). Bmhsp70 expression peaked during diapause initiation in third instars, which suggested that Bmhsp70 might play an important role in diapause induction in B. minax.
Cloning, characterization and homology, phylogenetic, and expression profile analyses of Bmhsp90
The partial cDNA sequence of B. minax hsp90 (Bmhsp90) was 1,720-bp long (Fig 6). It was found that the present Hsp90 sequence may represent the second half of the full-length cDNA (including the 3′ end) and consisted of about half of the full-length cDNA. The present Hsp90 cDNA sequence included a 3′-terminal UTR of 180 bp containing a poly(A) tail and an ORF of 1,089 bp encoding a polypeptide of 363 amino acids. The end motif of MEEVD was identified. One characteristic Hsp90 family sequence, GVVDSEDLPLNISRE, was detected. In addition, homology analysis revealed that compared to previously identified Hsp90 genes, the identity of the deduced amino acid sequence of BmHsp90 varied from 76 to 98% (Supplementary Material Table 3), indicating that the Hsp90 sequence is highly conserved. Hsp90 from Orthoptera, Hymenoptera, Hemiptera, Diptera, and Coleoptera were clustered into the same large group, which revealed that Hsp90 from these orders is highly conserved (Fig 7). However, the genetic distance of Hsp90 from Lepidoptera indicated several evolutionary divergences.
Hsp90 displayed a different expression pattern during insect diapause. In the present study, Bmhsp90 mRNA expression was not significantly different between the various diapause stages (F 14,72 = 1.013, p = 0.453) (Fig 3 c). Bmhsp90 mRNA was expressed throughout life and remained at a relatively low level during deep diapause of B. minax. The low expression level of Bmhsp90 mRNA might be attributed to a reduction in the level of ecdysone, leading to an increase in Bmhsp23 mRNA expression (MacRae 2010). It was reported that the hsp90 expression level was downregulated during pupal diapause of S. crassipalpis Macquart (Rinehart & Denlinger 2000), while it was upregulated during diapause termination of L. sericata (Tachibana et al 2005), and it was constantly expressed throughout pupal diapause of M. rotundata (Yocum et al 2005). Fan et al (2013) found that Hsp90, Hsp70, Hsp20.8, and Hsp20.4 were highly expressed in both diapause and nondiapause eggs of Bombyx mori Linnaeus and suggested they may play an important role in initial embryonic development regardless of the occurrence of diapause.
In summary, different Hsp genes play distinct roles in B. mina during the various diapause stages and that these Hsp genes interact with one another. This study represented the first characterization of Hsp genes in B. minax and their mRNA expression profiles during different diapause stages. The unique physiological expression patterns suggested that the Hsp genes play distinct roles in the regulation of diapause in B. minax. Bmhsp70 might play an important role in initiation diapause, Bmhsp23 might play a key role in diapause initiation and maintenance, and Bmhsp90 might play a minor role in the regulation of diapause. Our data improve our understanding of the mechanisms of diapause in B. minax at the molecular level. However, the precise physiological function of these Hsp genes during diapause in B. minax warrants further investigation.
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Acknowledgments
We thank Fu-Lian Wang for her help in the collection of insects. This study was supported by the National Basic Research and Development Program (Grant No. 2009CB119200), the Ministry of Science and Technology, China, and the Commonwealth Special Fund for the Agricultural Industry (no. 200903047).
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Edited by Anne-Nathalie Volkoff – INRA / Univ of Montpellier
Z. C. Lü and L. H. Wang contributed equally to this work.
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Table 1
sHsp sequences used for homology and phylogenetic analysis (DOCX 19 kb)
Table 2
Inducible Hsp70 sequences used for homology and phylogenetic analysis (DOCX 21 kb)
Table 3
Hsp90 sequences used for homology and phylogenetic analysis (DOCX 20 kb)
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Lü, Z.C., Wang, L.H., Zhang, G.F. et al. Three Heat Shock Protein Genes from Bactrocera (Tetradacus) minax Enderlein: Gene Cloning, Characterization, and Association with Diapause. Neotrop Entomol 43, 362–372 (2014). https://doi.org/10.1007/s13744-014-0216-y
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DOI: https://doi.org/10.1007/s13744-014-0216-y