Skip to main content

Advertisement

Log in

An IL-7 splicing-defect lymphopenia mouse model revealed by genome-wide mutagenesis

  • Published:
Journal of Biomedical Science

An Erratum to this article was published on 17 May 2007

Abstract

Homeostasis of the hematopoietic system is tightly regulated by an array of cytokines that control proliferation, differentiation and apoptosis of various cell lineages. To identify genes that are essential for hematopoietic homeostasis, we screened C57BL/6 mice that had been genome-wide mutagenized by N-ethyl-N-nitrosourea (ENU) to produce altered blood cell composition. We identified a mutant mouse line with a drastic reduction in the number of T and B cell lineages in lymphatic tissues and peripheral blood, as well as severe atrophy of the thymus and lymph nodes. Genotyping with a genome-wide single nucleotide polymorphism (SNP) marker set mapped the mutant phenotype to chromosome 3A and subsequent direct DNA sequencing revealed a G-to-A point mutation in the splicing donor site of the third exon of the candidate gene for IL-7, a lymphocyte survival cytokine. Such mutation resulted in skipping of exon 3 and production of an internally truncated IL-7 (ΔE3-IL7). Furthermore, using recombinant proteins produced in a baculoviral system, we demonstrated that ΔE3-IL7 had no detectable anti-apoptotic activity even at a dose that was 30 times more than that required for a wild-type protein to manifest a full activity in a naïve T cell survival assay. Our data suggest that this mutant mouse line␣provides an alternative animal model for the study of severe combined immunodeficiency (SCID) syndrome in humans.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Subscribe and save

Springer+ Basic
$34.99 /Month
  • Get 10 units per month
  • Download Article/Chapter or eBook
  • 1 Unit = 1 Article or 1 Chapter
  • Cancel anytime
Subscribe now

Buy Now

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  1. Waterston R.H., Lindblad-Toh K., Birney E., Rogers J., Abril J.F., Agarwal P., Agarwala R., Ainscough R., Alexandersson M., An P., Antonarakis S.E., Attwood J., Baertsch R., Bailey J., Barlow K., Beck S., Berry E., Birren B., Bloom T., Bork P., Botcherby M., Bray N., Brent M.R., Brown D.G., Brown S.D., Bult C., Burton J., Butler J., Campbell R.D., Carninci P., Cawley S., Chiaromonte F., Chinwalla A.T., Church D.M., Clamp M., Clee C., Collins F.S., Cook L.L., Copley R.R., Coulson A., Couronne O., Cuff J., Curwen V., Cutts T., Daly M., David R., Davies J., Delehaunty K.D., Deri J., Dermitzakis E.T., Dewey C., Dickens N.J., Diekhans M., Dodge S., Dubchak I., Dunn D.M., Eddy S.R., Elnitski L., Emes R.D., Eswara P., Eyras E., Felsenfeld A., Fewell G.A., Flicek P., Foley K., Frankel W.N., Fulton L.A., Fulton R.S., Furey T.S., Gage D., Gibbs R.A., Glusman G., Gnerre S., Goldman N., Goodstadt L., Grafham D., Graves T.A., Green E.D., Gregory S., Guigo R., Guyer M., Hardison R.C., Haussler D., Hayashizaki Y., Hillier L.W., Hinrichs A., Hlavina W., Holzer T., Hsu F., Hua A., Hubbard T., Hunt A., Jackson I., Jaffe D.B., Johnson L.S., Jones M., Jones T.A., Joy A., Kamal M., Karlsson E.K., Karolchik D., Kasprzyk A., Kawai J., Keibler E., Kells C., Kent W.J., Kirby A., Kolbe D.L., Korf I., Kucherlapati R.S., Kulbokas E.J., Kulp D., Landers T., Leger J.P., Leonard S., Letunic I., Levine R., Li J., Li M., Lloyd C., Lucas S., Ma B., Maglott D.R., Mardis E.R., Matthews L., Mauceli E., Mayer J.H., McCarthy M., McCombie W.R., McLaren S., McLay K., McPherson J.D., Meldrim J., Meredith B., Mesirov J.P., Miller W., Miner T.L., Mongin E., Montgomery K.T., Morgan M., Mott R., Mullikin J.C., Muzny D.M., Nash W.E., Nelson J.O., Nhan M.N., Nicol R., Ning Z., Nusbaum C., O’Connor M.J., Okazaki Y., Oliver K., Overton-Larty E., Pachter L., Parra G., Pepin K.H., Peterson J., Pevzner P., Plumb R., Pohl C.S., Poliakov A., Ponce T.C., Ponting C.P., Potter S., Quail M., Reymond A., Roe B.A., Roskin K.M., Rubin E.M., Rust A.G., Santos R., Sapojnikov V., Schultz B., Schultz J., Schwartz M.S., Schwartz S., Scott C., Seaman S., Searle S., Sharpe T., Sheridan A., Shownkeen R., Sims S., Singer J.B., Slater G., Smit A., Smith D.R., Spencer B., Stabenau A., Stange-Thomann N., Sugnet C., Suyama M., Tesler G., Thompson J., Torrents D., Trevaskis E., Tromp J., Ucla C., Ureta-Vidal A., Vinson J.P., Von Niederhausern A.C., Wade C.M., Wall M., Weber R.J., Weiss R.B., Wendl M.C., West A.P., Wetterstrand K., Wheeler R., Whelan S., Wierzbowski J., Willey D., Williams S., Wilson R.K., Winter E., Worley K.C., Wyman D., Yang S., Yang S.P., Zdobnov E.M., Zody M.C., Lander E.S. (2002) Initial sequencing and comparative analysis of the mouse genome. Nature 420:520–562

    Article  PubMed  CAS  Google Scholar 

  2. Herron B.J., Lu W., Rao C., Liu S., Peters H., Bronson R.T., Justice M.J., McDonald J.D., Beier D.R. (2002) Efficient generation and mapping of recessive developmental mutations using ENU mutagenesis. Nat. Genet. 30:185–189

    Article  PubMed  CAS  Google Scholar 

  3. Hrabe de Angelis M.H., Flaswinkel H., Fuchs H., Rathkolb B., Soewarto D., Marschall S., Heffner S., Pargent W., Wuensch K., Jung M., Reis A., Richter T., Alessandrini F., Jakob T., Fuchs E., Kolb H., Kremmer E., Schaeble K., Rollinski B., Roscher A., Peters C., Meitinger T., Strom T., Steckler T., Holsboer F., Klopstock T., Gekeler F., Schindewolf C., Jung T., Avraham K., Behrendt H., Ring J., Zimmer A., Schughart K., Pfeffer K., Wolf E., Balling R. (2000) Genome-wide, large-scale production of mutant mice by ENU mutagenesis. Nat. Genet. 25:444–447

    Article  PubMed  CAS  Google Scholar 

  4. Kile B.T., Hentges K.E., Clark A.T., Nakamura H., Salinger A.P., Liu B., Box N., Stockton D.W., Johnson R.L., Behringer R.R., Bradley A., Justice M.J. (2003) Functional genetic analysis of mouse chromosome 11. Nature 425:81–86

    Article  PubMed  CAS  Google Scholar 

  5. Nolan P.M., Peters J., Strivens M., Rogers D., Hagan J., Spurr N., Gray I.C., Vizor L., Brooker D., Whitehill E., Washbourne R., Hough T., Greenaway S., Hewitt M., Liu X., McCormack S., Pickford K., Selley R., Wells C., Tymowska-Lalanne Z., Roby P., Glenister P., Thornton C., Thaung C., Stevenson J.A., Arkell R., Mburu P., Hardisty R., Kiernan A., Erven A., Steel K.P., Voegeling S., Guenet J.L., Nickols C., Sadri R., Nasse M., Isaacs A., Davies K., Browne M., Fisher E.M., Martin J., Rastan S., Brown S.D., Hunter J. (2000) A systematic, genome-wide, phenotype-driven mutagenesis programme for gene function studies in the mouse. Nat. Genet. 25:440–443

    Article  PubMed  CAS  Google Scholar 

  6. Hoebe K., Du X., Georgel P., Janssen E., Tabeta K., Kim S.O., Goode J., Lin P., Mann N., Mudd S., Crozat K., Sovath S., Han J., Beutler B. (2003) Identification of Lps2 as a key transducer of MyD88-independent TIR signalling. Nature 424:743–748

    Article  PubMed  CAS  Google Scholar 

  7. Jun J.E., Wilson L.E., Vinuesa C.G., Lesage S., Blery M., Miosge L.A., Cook M.C., Kucharska E.M., Hara H., Penninger J.M., Domashenz H., Hong N.A., Glynne R.J., Nelms K.A., Goodnow C.C. (2003) Identifying the MAGUK protein Carma-1 as a central regulator of humoral immune responses and atopy by genome-wide mouse mutagenesis. Immunity 18:751–762

    Article  PubMed  CAS  Google Scholar 

  8. Vitaterna M.H., King D.P., Chang A.M., Kornhauser J.M., Lowrey P.L., McDonald J.D., Dove W.F., Pinto L.H., Turek F.W., Takahashi J.S. (1994) Mutagenesis and mapping of a mouse gene, Clock, essential for circadian behavior. Science 264:719–725

    Article  PubMed  CAS  Google Scholar 

  9. Namen A.E., Lupton S., Hjerrild K., Wignall J., Mochizuki D.Y., Schmierer A., Mosley B., March C.J., Urdal D., Gillis S. (1988) Stimulation of B-cell progenitors by cloned murine interleukin-7. Nature 333:571–573

    Article  PubMed  CAS  Google Scholar 

  10. Murray R., Suda T., Wrighton N., Lee F., Zlotnik A. (1989) IL-7 is a growth and maintenance factor for mature and immature thymocyte subsets. Int. Immunol. 1:526–531

    Article  PubMed  CAS  Google Scholar 

  11. Maeurer M.J., Lotze M.T. (1998) Interleukin-7 (IL-7) knockout mice. Implications for lymphopoiesis and organ-specific immunity. Int. Rev. Immunol. 16:309–322

    PubMed  CAS  Google Scholar 

  12. von Freeden-Jeffry U., Vieira P., Lucian L.A., McNeil T., Burdach S.E., Murray R. (1995) Lymphopenia in interleukin (IL)-7 gene-deleted mice identifies IL-7 as a nonredundant cytokine. J. Exp. Med. 181:1519–1526

    Article  Google Scholar 

  13. Peschon J.J., Morrissey P.J., Grabstein K.H., Ramsdell F.J., Maraskovsky E., Gliniak B.C., Park L.S., Ziegler S.F., Williams D.E., Ware C.B., Meyer J.D., Davison B.L. (1994) Early lymphocyte expansion is severely impaired in interleukin 7 receptor-deficient mice. J. Exp. Med. 180:1955–1960

    Article  PubMed  CAS  Google Scholar 

  14. Macchi P., Villa A., Giliani S., Sacco M.G., Frattini A., Porta F., Ugazio A.G., Johnston J.A., Candotti F., O’Shea J.J., et al. (1995) Mutations of Jak-3 gene in patients with autosomal severe combined immune deficiency (SCID). Nature 377:65–68

    Article  PubMed  CAS  Google Scholar 

  15. Noguchi M., Yi H., Rosenblatt H.M., Filipovich A.H., Adelstein S., Modi W.S., McBride O.W., Leonard W.J. (1993) Interleukin-2 receptor gamma chain mutation results in X-linked severe combined immunodeficiency in humans. Cell 73:147–157

    Article  PubMed  CAS  Google Scholar 

  16. Puck J.M., Deschenes S.M., Porter J.C., Dutra A.S., Brown C.J., Willard H.F., Henthorn P.S. (1993) The interleukin-2 receptor gamma chain maps to Xq13.1 and is mutated in X-linked severe combined immunodeficiency, SCIDX1. Hum. Mol. Genet. 2:1099–1104

    Article  PubMed  CAS  Google Scholar 

  17. Puel A., Ziegler S.F., Buckley R.H., Leonard W.J. (1998) Defective IL7R expression in T(−)B(+)NK(+) severe combined immunodeficiency. Nat. Genet. 20:394–397

    Article  PubMed  CAS  Google Scholar 

  18. Russell S.M., Tayebi N., Nakajima H., Riedy M.C., Roberts J.L., Aman M.J., Migone T.S., Noguchi M., Markert M.L., Buckley R.H., O’Shea J.J., Leonard W.J. (1995) Mutation of Jak3 in a patient with SCID: essential role of Jak3 in lymphoid development. Science 270:797–800

    Article  PubMed  CAS  Google Scholar 

  19. Weber J.S., Salinger A., Justice M.J. (2000) Optimal N-ethyl-N-nitrosourea (ENU) doses for inbred mouse strains. Genesis 26:230–233

    Article  PubMed  CAS  Google Scholar 

  20. Huang H.M., Li J.C., Hsieh Y.C., Yang-Yen H.F., Yen J.J. (1999) Optimal proliferation of a hematopoietic progenitor cell line requires either costimulation with stem cell factor or increase of receptor expression that can be replaced by overexpression of Bcl-2. Blood 93:2569–2577

    PubMed  CAS  Google Scholar 

  21. Yu Y.L., Chiang Y.J., Yen J.J. (2002) GATA factors are essential for transcription of the survival gene E4bp4 and the viability response of interleukin-3 in Ba/F3 hematopoietic cells. J. Biol. Chem. 277:27144–27153

    Article  PubMed  CAS  Google Scholar 

  22. Pletcher M.T., McClurg P., Batalov S., Su A.I., Barnes S.W., Lagler E., Korstanje R., Wang X., Nusskern D., Bogue M.A., Mural R.J., Paigen B., Wiltshire T. (2002) Use of a dense single nucleotide polymorphism map for in silico mapping in the mouse. PLoS Biol. 2:e393

    Article  CAS  Google Scholar 

  23. Jurinke C., van den Boom D., Cantor C.R., Koster H. (2002a) The use of MassARRAY technology for high throughput genotyping. Adv. Biochem. Eng. Biotechnol. 77:57–74

    CAS  Google Scholar 

  24. Jurinke C., van den Boom D., Cantor C.R., Koster H. (2002b) Automated genotyping using the DNA MassArray technology. Methods Mol. Biol. 187:179–192

    CAS  Google Scholar 

  25. Yuan H.Y., Chen J.J., Lee M.T., Wung J.C., Chen Y.F., Charng M.J., Lu M.J., Hung C.R., Wei C.Y., Chen C.H., Wu J.Y., Chen Y.T. (2005) A novel functional VKORC1 promoter polymorphism is associated with inter-individual and inter-ethnic differences in warfarin sensitivity. Hum. Mol. Genet. 14:1745–1751

    Article  PubMed  CAS  Google Scholar 

  26. Schmittgen T.D., Zakrajsek B.A. (2000) Effect of experimental treatment on housekeeping gene expression: validation by real-time, quantitative RT-PCR. J. Biochem. Biophys. Methods 46:69–81

    Article  PubMed  CAS  Google Scholar 

  27. Wu J.Y., Kao H.J., Li S.C., Stevens R., Hillman S., Millington D., Chen Y.T. (2004) ENU mutagenesis identifies mice with mitochondrial branched-chain aminotransferase deficiency resembling human maple syrup urine disease. J. Clin. Invest. 113:434–440

    Article  PubMed  CAS  Google Scholar 

  28. Rathmell J.C., Farkash E.A., Gao W., Thompson C.B. (2001) IL-7 enhances the survival and maintains the size of naive T cells. J. Immunol. 167:6869–6876

    PubMed  CAS  Google Scholar 

  29. Oliver P.M., Wang M., Zhu Y., White J., Kappler J., Marrack P. (2004) Loss of Bim allows precursor B cell survival but not precursor B cell differentiation in the absence of interleukin 7. J. Exp. Med. 200:1179–1187

    Article  PubMed  CAS  Google Scholar 

Download references

Acknowledgements

We are grateful to Jia-Zu Chen, Wan-Chen Hsieh, Chien-Tsang Sun and Yoo-Hsan Lin for their technical assistance, and to Drs. Yuan-Tsong Chen, Chien-Kuo Lee, and Hsin-Fang Yang-Yen for their critical reading of this manuscript. We thank the ENU mutagenesis core for providing G3 mice and the National Genotyping center for technical support. This work was supported by the Genomics and Proteomics Program from Academia Sinica, Taiwan to JJY.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Jeffrey Jong-Young Yen.

Additional information

An erratum to this article can be found at http://dx.doi.org/10.1007/s11373-007-9174-2

Rights and permissions

Reprints and permissions

About this article

Cite this article

Huang, HW., Chiang, YJ., Hung, SI. et al. An IL-7 splicing-defect lymphopenia mouse model revealed by genome-wide mutagenesis. J Biomed Sci 14, 169–181 (2007). https://doi.org/10.1007/s11373-006-9135-1

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s11373-006-9135-1

Keywords

Navigation