Abstract
A recombinant putative β-galactosidase from Thermoplasma acidophilum was purified as a single 57 kDa band of 82 U mg−1. The molecular mass of the native enzyme was 114 kDa as a dimer. Maximum activity was observed at pH 6.0 and 90°C. The enzyme was unstable below pH 6.0: at pH 6 its half-life at 75°C was 28 days but at pH 4.5 was only 13 h. Catalytic efficiencies decreased as p-nitrophenyl(pNP)-β-d-fucopyranoside (1067) > pNP-β-d-glucopyranoside (381) > pNP-β-d-galactopyranoside (18) > pNP-β-d-mannopyranoside (11 s−1 mM−1), indicating that the enzyme was a β-glycosidase.
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Introduction
β-Glucosidase (EC 3.2.1.21) is a key enzyme for carbohydrate metabolism in bacteria, fungi, and yeast. The enzyme catalyzes the hydrolysis of β-glucosidic bond of cellulose to degrade cello-oligosaccharides to glucose. β-Glucosidase plays in many biological processes such as the release of aromatics from flavorless glucosidic precursors, detoxification of cyanogenic glycosides, and synthesis of useful β-glucosides (Bhat and Bhat 1997; Bhatia et al. 2002; Chuankhayan et al. 2007).
Although many β-glucosidases have been isolated from fungi, relatively few have been extracted from archaebacteria. Due to their inherent thermostability, hyperthermophilic β-glucosidases from archaebacteria are more useful for glucose production from cello-oligosaccharides than the enzymes from mesophilic and thermophilic bacteria. The gene sequences of hyperthermophilic β-glycosidases from archaebacteria including Pyrococcus horikoshii (Matsui et al. 2000), P. furiosus (Kengen et al. 1993), Sulfolobus solfataricus (D’Auria et al. 1996), Thermotoga maritima (Gabelsberger et al. 1993), and Thermotoga neapolitana (Zverlov et al. 1997) have been cloned and their expressed enzymes have been characterized. Family 1 glycoside hydrolases from archaeabacteria exhibit broad substrate specificity (Bhatia et al. 2002). To find a new thermostable β-glucosidase, gene sequences within this family were searched for a β-glycosidase gene, and then we obtained a non-characterized bglA gene from Thermoplasma acidophilum. However, upon evaluation of substrate specificity, its expressed enzyme (TaBglA) was identified as a β-glycosidase.
In this study, TaBglA was purified and its biochemical properties, including optimum pH and temperature, pH stability, thermostability, and substrate specificity, were investigated.
Materials and methods
Microorganisms, culture conditions, and media
Thermoplasma acidophilum DSM 1728, used as gene source, was cultivated in medium containing 10 g glucose l−1, 1 g yeast extract l−1, 2 g (NH4)2SO4 l−1, 3 g KH2PO4 l−1, 0.5 g MgSO4 · 7H2O l−1, and 0.25 g CaCl2 · 2H2O l−1. The pH of the medium was adjusted to two with 5M H2SO4. Cultures were grown at 60°C under aerobic conditions for 2 days. Recombinant Escherichia coli for protein expression were cultivated in a LB medium at 37°C with 50 μg ampicillin ml−1 for 24 h.
Gene cloning and enzyme expression
The genomic DNA was isolated from harvested cells of T. acidophilum using genomic DNA buffer set (Qiagene, Hilden, Germany). The bglA gene sequence was obtained from the DNA sequence of T. acidophilum previously proposed as β-galactosidase (GenBank accession number NP 394779). The PCR product was subcloned into the pHCE plasmid vector (Takara, Tokyo, Japan) using restriction enzyme EcoRI and HindI and then transformed into E. coli ER2566 (New England Biolabs, Hertfordshire, UK).
Enzyme assay
The assay of TaBglA was performed in 100 mM citrate/phosphate buffer (pH 6.0) containing 1 mM p-nitrophenyl-β-d-glucopyranoside (pNPGlu) and 0.15 U enzyme ml−1 at 90°C for 5 min. The activity was measured by reading the increase in absorbance at 415 nm as a result of p-nitrophenol (pNP) release. One unit (U) of enzyme activity was defined as the amount of enzyme required to liberate 1 μmol pNP per min at 90°C and pH 6.0.
Results and discussion
Enzyme expression and purification
The enzyme investigated in this study was expressed in Escherichia coli by a bglA gene of 1,452 bp (GenBank accession number NP 394779) from T. acidophilum. The amino acid sequence of the resulting enzyme exhibited 49, 48, 47, and 46% identity with those of Picrophilus torridus β-galactosidase, Caldivirga maquilingensis family 1 glycoside hydrolase, S. solfataricus β-galactosidase, and P. furiosus β-glycosidase, respectively. These results indicate that the enzyme had no significant similarities with any other glycoside hydrolases isolated from archaeabacteria. The enzyme was purified with a specific activity of 82 U mg−1 (Table 1) and as a single band of 57 kDa in SDS-PAGE (Fig. 1a). Using MALDI-TOF-MS (AXIMA-CFR, Shimadzu, Kyoto, Japan) equipped with a 337-nm N2 laser and calibrated with aldolase (39,212 Da) and albumin (66,429 Da), the subunit molecular mass of the protein was estimated as 57,071 ± 65 Da. The native enzyme existed as a dimer with a molecular mass of 114 kDa as determined by gel filtration (Fig. 1b).
Effects of pH and temperature on enzyme stability
The maximum activity of TaBglA at 75°C was initially at pH 4.5 but after 1 h at 75°C was at pH 6.0 (Fig 2a), indicating a relative instability below pH 6.0. Temperature effects were investigated at pH 4.5 and 6.0, with maximum activities observed at 80 and 90°C, respectively (Fig 2b). The decrease of optimum temperature occurred under destabilizing conditions at pH 4.5. Thus, enzyme activity was maximized at pH 6.0 and 90°C.
The amino acid sequence of S. solfataricus β-glycosidase exhibited 47% identity with enzyme herein, and the active site residues of both enzymes were highly conserved. The thermostability of β-glycosidase from S. solfataricus is determined by a network of ion pairs, located on the tetrameric surface, which results in destabilization of the enzyme under the basic conditions (D’Auria et al. 1997, 1998; Cobucci-Ponzano et al. 2002). Similarly, the destabilization of the enzyme isolated in this study below pH 6.0 may be due to ion pair interactions on the surface of the dimer.
The half-lives of the enzyme for incubation at pH 6.0 were 675, 58, 3.5, and 0.4 h at 75, 80, 85, and 90°C, respectively. These parameters changed significantly at pH 4.5, and were 167, 66, 13, and 0.5 h at 70, 75, 80, and 85°C, respectively (Fig. 3). The half-life of the enzyme at 75°C was decreased from 28 days to 13 h by shifting the pH from 6.0 to 4.5, indicating a significant decrease in thermostability. The half-lives of thermostable β-glycosidases from P. furiosus, S. solfataricus (Petzelbauer et al. 1999), Thermus sp. (Takase and Horikoshi 1988), Thermus thermophilus (Dion et al. 1999), Thermoascus aurantiacus (Leite et al. 2007), and Chaetomium thermophilum var. coprophilum (Venturi et al. 2002) have been reported as 60 days at 70°C, 10 days at 70°C, 5 days at 75°C, 30 min at 80°C, and 75 min at 70°C, respectively. Therefore, with the exception of β-glycosidase from P. furiosus, the enzyme described here exhibited the highest thermostability. Furthermore, the enzyme was not activated by the presence of monovalent or divalent cations and was not inhibited by EDTA (data not shown).
Substrate specificity
Table 2 shows the specific activities and kinetic parameters of the enzyme for aryl-β-glycosides. The hydrolyzing activity of the enzyme was much higher with substrates containing β-1-4 linkages, such as pNPF and pNPGlu, than with substrates containing β-1-2 linkages, such as oNPF and oNPGlu. Catalytic efficiencies decreased as pNPF (1067) > pNPGlu (381) > pNPM (18) > pNPGal (11 s−1 mM−1). The values of k cat/K m for pNPF and pNPGlu were 97- and 35-fold higher than that obtained with pNPGal, respectively, indicating that the enzyme investigated herein was not a β-galactosidase as previously proposed, but rather a β-glycosidase.
In conclusion, the non-characterized bglA gene from T. acidophilum was cloned and expressed. The values of k cat/K m of the enzyme with pNPF and pNPGlu were 97- and 35-fold higher than that obtained with pNPGal, respectively, indicating that the enzyme was a β-glycosidase. Because the enzyme was unstable below pH 5.5, its half-life at 75°C decreased from 28 days to 13 h upon shifting the pH from 6.0 to 4.5. Thus, TaBglA, when stabilized at pH 6.0, can be used effectively for degradation of cello-oligosaccharides to glucose.
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Acknowledgments
This study was carried out with the support of ‘Forest Science and Technology Projects (Project No. S210707L010120)’ provided by Korea Forest Service, by the 21C Frontier Project for Microbial Genomics, Ministry of Science and Technology, and by the Korea Research Foundation Grant (MOEHRD) (KRF-2006-351-D00012).
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Kim, HJ., Park, AR., Lee, JK. et al. Characterization of an acid-labile, thermostable β-glycosidase from Thermoplasma acidophilum . Biotechnol Lett 31, 1457–1462 (2009). https://doi.org/10.1007/s10529-009-0018-1
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DOI: https://doi.org/10.1007/s10529-009-0018-1