Abstract
A rapid and sensitive colorimetric assay is described for Salmonella typhimurium (S. typhimurium) detection using urea/phenol red impregnated test paper. Aptamer-modified Fe3O4@Ag multifunctional hybrid nanoprobes (apt-Fe3O4@Ag NPs) were used to specifically captured S. typhimurium; the nanoprobes were quickly etched by H2O2 to form Ag+. The generated Ag+ can inhibit the urease-catalyzed hydrolysis reaction of urea to produce NH4+. Consequently, the as-prepared test paper displayed a yellow color. In the presence of S. typhimurium, the target bacteria can cause aggregation of apt-Fe3O4@Ag NPs, and the deposited Ag on the nanoprobe’s surface is shielded against H2O2-induced oxidative decomposition leading to reduced Ag+ production. The catalytic activity of urease cannot be inhibited completely by inadequate amount of Ag+. An obvious color change from yellow to pink can be monitored directly using our test paper as a result of increased NH4+. The entire assay procedure could be completed within 1 h. A limit of detection of 48 cfu/mL is achieved with a linear range of 1 × 102 to 1 × 106 cfu/mL. The recoveries of S. typhimurium spiked in pure milk samples were 92.48–94.05%.
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Introduction
Foodborne diseases have been considered among the most important public health problems worldwide [1], and the number of foodborne disease incidences rises significantly in recent years [2]. Salmonella is widely known as one of the most prevalent pathogens causing foodborne illness outbreaks [3]. Salmonella contaminates food products, like eggs, fruits, vegetables, meat, poultry, and milk, typically through animal fecal contamination [4]. According to the World Health Organization, diarrheal diseases are the most common illnesses resulting from unsafe food, 550 million people falling ill each year, including 220 million children under the age of 5 years. Salmonella is 1 of the 4 key global causes of diarrheal diseases [5]. So there is an urgent need to detect Salmonella at pre-infectious levels. At present, traditional culture-based methods for the detection of S. typhimurium are laborious and time-consuming, often taking 3–5 days to obtain a result [6]. The need for expensive equipment and trained lab personnel increases detecting costs, making large-scale studies of Salmonella epidemiology hard [7]. To achieve the rapid and sensitive requirements for S. typhimurium detection, numerous culture-independent techniques have been developed including polymerase chain reaction (PCR) [8], fluorescence [9], electrochemistry [10], surface plasmon resonance (SPR) [11], and so on. Although all the methods mentioned above are accuracy and sensitive, they need expensive and sophisticated equipment and complicated sample preparation while having time-consuming steps. Accordingly, it is crucial to develop simple, inexpensive, and effective methods to detect S. typhimurium in contaminated food samples.
Over the past decade, paper-based analytical devices (PADs) have been successfully developed. The properties of PADs are small sample, reagent consumption, disposability, and portability [12]. PADs hold great potential for using as analytical tools in remote areas. These advantages make PADs attractive for detection in fields such as environmental monitoring, medical diagnostics, point-of-care testing, and food safety control [13]. However, there have been only a few reports on using PADs for rapid detection of bacteria. Although different PAD methods possess their own features and gives the different insights, these methods usually suffer from some inevitable defects such as complicated test paper preparation and time-consuming. For example, paper-based ELISA are often employed for point-of-care diagnostic analysis of bacteria, but most of paper-based ELISA still tolerate their expensive antibody, complicated paper preprocessing and background interference [14, 15]. PADs based on species-specific enzyme of bacteria are of limited use for on-site applications as they are time-consuming on pretreatment sample process and rely on bacterial activity [16]. PAD based on bacterial glucose metabolism is nonspecific, and the color change of this PAD is indistinguishable because of the method used starch-iodide paper as substrate [17]. Therefore, the development of simple and legible test paper for bacteria detection is strongly desired.
Magnetic composite microspheres have been extensively explored because of their applications in the biomedical field [18]. In particular, magnetic composite microspheres possess strong magnetic responsiveness owing to their micro-scale magnetic core, which is more suitable than magnetic nanoparticles for bio-separation [19]. Magnetic nanoparticles are not easily modified by aptamer or antibody because they have few modifiable sites and magnetic attraction often brings in aggregation among particles to lose magnetic properties [20]. In order to overcome this limitation, the magnetic Fe3O4@Ag nanocomposites have been developed. Due to the multifunction of the nanocomposites, Fe3O4@Ag not only possesses magnetic separation ability but also is prone to modification. The Fe3O4@Ag with fast response and high sensitivity has been served as the target capture tool and the SERS or electrochemical signal amplification platform [21, 22]. But up to now, to our knowledge, the Fe3O4@Ag nanocomposites have not been applied in bacteria colorimetric detection.
In this study, we developed a rapid and sensitive colorimetric assay for S. typhimurium detection using multifunctional hybrid nanoprobes and urea/phenol red impregnated paper. To selectively recognize the target, the multifunctional hybrid nanoprobes were synthesized and modified with specific aptamer via Ag-S bond (apt-Fe3O4@Ag NPs). Through etching of silver shell coated on the apt-Fe3O4@Ag NPs to regulate the catalytic activity of urease [23, 24], the multifunctional hybrid nanoprobes conversed the signal of the number of S. typhimurium to the color change of as-prepared test paper as a result of pH value change. Therefore, an obvious color change from yellow to pink can be monitored directly. The entire assay procedure can be completed within 1 h without pre-enrichment and any sophisticated instrument. Herein, apt-Fe3O4@Ag NPs are not only intended for enrich and magnetic separation of S. typhimurium, but also its silver shell can be used as the reaction substrate to realize the output of detection signals. Compared with “sandwich assays” with two or more nanoprobes [25, 26], multifunctional apt-Fe3O4@Ag NPs made the operation simpler and faster. Furthermore, the combination of smartphone technology and colorimetric paper-based sensing platform can enable simple inexpensive diagnostics.
Experimental details
Materials and reagents
Ferric chloride hexahydrate (FeCl3·6H2O), trisodium citrate, sodium acetate (NaAc), acetone, and hydrogen peroxide (H2O2) were from Beijing Chemical Reagent Co., Ltd. (China). Urease and Poly-vinylpyrrolidone (PVPk-30) were from Shanghai Yuanye Bio-Technology Co., Ltd. (China). Ethylene glycol was from Tianjin Fuyu (China). Silver nitrate (AgNO3) and tris (2-carboxyethyl) phosphine hydrochloride (TCEP) were received from Aladdin (China). Urea was purchased from Sigma-Aldrich (USA). Phenol red was from Macklin (China). Thiolated anti-S. typhimurium aptamers were obtained from Sangon Biotech (Shanghai) Co., Ltd. (China) with the following sequences [27]: 5′-SH-(CH2)6-TAT GGC GGC GTC ACC CGA CGG GGA CTT GAC CTT GAC ATT ATG ACA G-3′.
The pH-neutral (pH = 7.2) double distilled water (DDW) and phosphate-buffered saline (PBS, 0.01 mol L−1, pH = 7.4) were prepared by us. The test paper with phenol red and urea was homemade. Briefly, the neutral cotton filter paper (Aoke, China) was completely soaked by a 60% (w/v) ethanol solution containing 0.1% (w/v) phenol red and 0.5 M urea. After drying, the treated paper should be stored in the sealed, cool, dark, and dry condition.
Synthesis of Fe3O4@Ag nanoparticles
Firstly, the Fe3O4 magnetic particles were synthesized through a modified solvothermal reaction as previously reported [28]. FeCl3·6H2O (2.16 g, 8 mmol), trisodium citrate (0.5 g, 1.7 mmol), and sodium acetate (NaAc·3H2O) (3.34 g, 24.4 mmol) were dissolved in ethylene glycol (40 mL) with magnetic stirring. The yellow solution was then transferred into a 100-mL Teflon-lined stainless-steel autoclave, heated at 200 °C for 10 h, and then cooled to room temperature. The black products were washed three times in ethanol and DDW, respectively. Finally, black Fe3O4 nanoparticles were stored in sealed and dry conditions for further use.
Fe3O4@Ag nanoparticles were synthesized by a solution-phase reduction that was adopted to protect growth under PVP on the surface of magnetic microspheres [29]. The prepared Fe3O4 particles (0.2 g) were dispersed in 24 mL of ethylene glycol containing silver nitrate (0.1 g) and PVPk-30 (2.5 g) and then stirred for 12 h at 100 °C. Next, the silver nanoparticle embedded Fe3O4 particles (Fe3O4@Ag) were washed with acetone and DDW several times to remove ethylene glycol and PVPk-30. Finally, the product was resuspended with DDW and stored at 4 °C for further uses.
Preparation of the apt-Fe3O4@Ag nanoprobes
The aptamers against S. typhimurium were modified onto the surface of Fe3O4@Ag based on a procedure reported in literature [30]. First, 10 μL of 10 μM aptamer was incubated with 1 μL of 1-mM TCEP buffer in the dark for 1 h for the reduction of disulfide bond of aptamer. Then, 1 mL of 1 mg·mL−1 Fe3O4@Ag solution was added to the deprotected aptamer and kept for 12 h for the assembling of Fe3O4@Ag to thiol group of aptamer segment. After that, apt-Fe3O4@Ag NPs were washed three times with DDW and resuspended in 500 μL of DDW. Finally, the products were stored at 4 °C without light for further uses.
Culture of bacteria
All the bacterial strains used in this study were provided by the Department of Hygienic Inspection, School of Public Health, Jilin University (Changchun, China). Five foodborne pathogenic bacterial strains stored at − 80 °C were used, including the target bacterium, S. typhimurium (ATCC 14028), and the four non-target bacteria, Staphylococcus aureus (ATCC 23213), Listeria monocytogenes (ATCC 43251), Escherichia coli O157:H7 (ATCC 43888), and Vibrio parahaemolyticus (ATCC 17802).
All of them were revived on Luria-Bertani agar (LA) plates, except Vibrio parahaemolyticus, which was revived on LA plates with 3% (w/v) NaCl. After 24 h of inoculation, a single colony of each strain was picked up and grown in the corresponding medium at 37 °C with shaking at 180 rpm for 10 h. Subsequently, the bacteria were washed three times using sterile PBS by centrifugation at 5000 rpm for 10 min. After pour plate counting, it was diluted by sterile PBS aqueous solution.
Colorimetric detection of S. typhimurium
Bacteria samples with varying concentrations (from 1 × 102 to 1 × 106 cfu/mL) were prepared by diluting the freshly cultured bacteria with sterile PBS. The H2O2 solution was also diluted by sterile PBS. After optimization of experimental conditions, 900 μL of 10-fold serial dilutions of S. typhimurium were respectively added into sterile Eppendorf tubes containing 100 μL of 2 mg·mL−1 apt-Fe3O4@Ag NPs. For the negative control, 900 μL of sterile PBS without bacteria was used. The mixtures were incubated at room temperature shaken for 45 min. After magnetic separating for 2 min, 100 μL of 100 mM H2O2 was added to each tube to etch apt-Fe3O4@Ag-S. typhimurium complexes followed by magnetic separation for 2 min. Next, 5 μL of supernatant in each tube was taken to another one tube containing 10 μL of 50 U/mL urease. After 10 min of incubated at room temperature, the test paper was dipped with 2-μL reaction solution. The color change of test paper was recorded at the designated illuminated position by taking a photograph with a smartphone (Apple, USA).
Detection of S. typhimurium in real samples
Pure milk from the local supermarket was diluted 100-fold with sterile PBS and was artificially spiked with freshly cultured S. typhimurium at different levels (from 1 × 102 to 1 × 106 cfu/mL). The detection protocol was described in the section rapid colorimetric detection of S. typhimurium procedure for S. typhimurium detection, except that pure PBS buffer was replaced with milk samples.
Images and data analysis
The digital images of JPEG format files were imported into ImageJ (NIH, USA) software for further analyzing [31]. The largest “fittable” square was interactively drawn around each paper square in the dipstick image, and the RGB value of each reaction area was captured. Based on the RGB analysis, the gray value was calculated using a weighted average of red, green, and blue components using the eye sensitivity function (gray value = 0.30 ∗ R + 0.59 ∗ G + 0.11 ∗ B) [32]. All the data were expressed as the means ± standard deviations (x ± SD). Student’s t-tests and analysis of variance (ANOVA) were conducted for the statistical analysis using SPSS Statistics software (version 22.0, IBM, USA). The analyses used a two-sided 0.05 significance level.
Results and discussion
The principle of colorimetric detection of S. typhimurium
In this study, a rapid and sensitive colorimetric assay for S. typhimurium detection using apt-Fe3O4@Ag NPs and urea/phenol red impregnated paper was developed. Scheme 1 illustrates the whole procedure. The high specific sequences of thiol-modified ssDNA aptamer against S. typhimurium were obtained from Joshi’s work [27] and further immobilized to the surface of Fe3O4@Ag to form multifunctional hybrid nanoprobes (apt-Fe3O4@Ag NPs) by Ag-S bond. The apt-Fe3O4@Ag NPs is not only intended for enriching and magnetic separation of S. typhimurium, but also its silver shell can be used as the reaction substrate to realize the output of detection signals. The apt-Fe3O4@Ag NPs were specifically captured S. typhimurium as well as quickly were etched by H2O2 to produce Ag+ through autocatalytic oxidation reaction of Ag nanoparticles [23]. The generated Ag+ can inhibit the urease-catalyzed hydrolysis reaction of urea to produce NH4+, because the binding of the silver ions at the edge of the active site channel supposedly blocks the movement of the flap [24]. The urea/phenol red test paper is used as a carrier of colorimetric signal presentation. Consequently, the test paper displayed the original yellow color. In the presence of S. typhimurium, the apt-Fe3O4@Ag NPs can recognize and bound to the target bacteria to form apt-Fe3O4@Ag NPs-S. typhimurium complexes, leading to a large-scale aggregation toward to the target bacteria. Based on this phenomenon, the deposited Ag on the nanoprobes surface is shielded against H2O2-induced oxidative decomposition resulting in few Ag+ production. Herein, the H2O2 is used to etch silver shell coated on the apt-Fe3O4@Ag NPs to regulate the catalytic activity of urease. The catalytic activity of urease is partially inhibited by inadequate amount of Ag+. Different levels of etching of silver shell are corresponding to the different S. typhimurium concentration. Therefore, an obvious color change from yellow to pink could be monitored directly using our test paper as a result of NH4+ increased by urease-mediated the hydrolytic decomposition of urea. For quantitatively, the gray value was proportional to the S. typhimurium logarithm concentration.
Characterization of the apt-Fe3O4@Ag NPs
This core-shell structured apt-Fe3O4@Ag NPs has an Fe3O4 magnetic core and a layer of Ag nanoparticles’ shell. Size analysis of particles in TEM images was carried out using the ImageJ software. We chose three inner diameters of every nanoparticle (total 50 nanoparticles) and take the average value. All the data were expressed as the means ± standard deviations (x ± SD). Figure 1a and b displayed the TEM photograph of Fe3O4 and Fe3O4@Ag microspheres with a mean diameter of about 110 ± 4 nm and 130 ± 5 nm, respectively. As revealed in Fig. 1c, the apt-Fe3O4@Ag NPs microspheres were uniform with a size of approximately 131 ± 5 nm and 10 nm of Ag nanoparticle layer. Finally, the aggregations of apt-Fe3O4@Ag NPs were observed in Fig. 1d, which was due to the specific binding between lots of apt-Fe3O4@Ag NPs and S. typhimurium resulting in forming the apt-Fe3O4@Ag-S. typhimurium complexes [33].
To verify the formation of Ag nanocrystals in the microspheres, the X-ray diffraction (XRD) patterns of apt-Fe3O4@Ag NPs were recorded from 2θ = 20° to 80°. As depicted in Fig. 2a, the position and relative intensities of peaks observed at 2θ of 30.5°, 35.9°, 43.4°, 57.6°, and 63.2° match perfectly to Fe3O4 with an inverse cubic spinal structure according to JCPDS data (card no. 75−1609). Diffraction peaks at 2θ of 38.3°, 44.5°, 65.1°, and 77.5°, which correspond to the (111), (200), (220), and (311) lattice planes of the face-centered cubic (fcc) phase of Ag (JCPDS no.04-0783), respectively [34].
In the UV-Vis spectrum (Fig. 2b), the Fe3O4@Ag microspheres exhibited an absorption peak at 402 nm that corresponds to a typical surface plasmon resonance band of silver nanoparticles. After modifying aptamer on the Fe3O4@Ag microspheres, the absorption peak shifted to 416 nm. The FTIR spectrum of apt-Fe3O4@Ag NPs was demonstrated in Fig. 2c. The obvious characteristic band at 586, 1454, 1612, and 3331 cm−1 could be attributed to the stretching vibration of Fe-O bond, C-N bond, C=O bond of peptide linkages, O-H and N-H bond could be attributed to the stretching vibration of Fe-O bond, C-N bond, C=O bond of peptide linkages, O-H and N-H bond, respectively [35]. The magnetic property of apt-Fe3O4@Ag NPs was examined using VSM magnetometry. As shown in Fig. 2d, the magnetic saturation (MS) value of Fe3O4, Fe3O4@Ag, and apt-Fe3O4@Ag NPs was 65.7 emu/g, 60.7 emu/g, and 57.1 emu/g, respectively. The decrease of MS indicates that silver shell deposited on Fe3O4 nanoparticles as expected. Moreover, the apt-Fe3O4@Ag NPs could be completely separated from the solution by an external magnet within 20 s, indicating that these apt-Fe3O4@Ag NPs had strong magnetic responsivity and were very suitable for efficient separation and enrichment of target molecules in solution.
Optimization of experimental conditions
In order to achieve the best experimental performance, subsequent experimental conditions were optimized, such as the concentration of etching agent, etching time, and incubation time for urease reacted with Ag+. Respective data and figures were given in the ESM (Fig. S1–S3). The following experimental conditions were chosen to give the best results: (a) concentration of H2O2, 100 mM; (b) etching time, 10 min; and (c) incubation time, 2 min. In addition, the lifetime of apt-Fe3O4@Ag NPs and the test paper were investigated (Fig. S4). The results indicated that the apt-Fe3O4@Ag NPs could be used within 1 month after preparation in 4 °C condition, and the test paper was recommended to be used within 9 months in a sealed, cool, dark, and dry condition.
Sensitivity and selectivity of the assay
Under the optimized conditions, varying concentrations of S. typhimurium (from 1 × 102 to 1 × 106 cfu/mL) were prepared by diluting the freshly cultured bacteria with sterile PBS. PBS was employed instead of S. typhimurium as a negative control (NC). Herein, only 80% of the area of the testing spot was considered in the measurement to prevent edge effects [36]. As presented in Fig. 3, with increasing of the concentration of S. typhimurium, the color of the test paper gradually changed from yellow to pink, revealing that the degree of etching of silver shell was reversely dependent on S. typhimurium level (the original image is in Fig. S5). The limit of detection (LOD) for S. typhimurium was determined to be 48 cfu/mL (3σ/slope, where σ is the standard deviation of 10 blank samples) [37]. Also, the RGB value of test papers was measured. Its gray value change could be well fitted by a linear function, y = − 7.249x + 151.5, with a correlation coefficient of R2 = 0.985, where x was the log scale of S. typhimurium count in cfu/mL (Fig. 3).
To investigate the selectivity of our proposed colorimetric method, the concentration of S. typhimurium was tested at 1 × 106 cfu/mL, and 4 other common bacterial strains at the concentration of 1 × 107 cfu/mL were detected as possible interfering species, including E. coli O157:H7, L. monocytogenes, S. aureus, and V. parahaemolyticus, and the sterile PBS sample was used as the reagent blank. First, each interfering bacterial strain was analyzed separately. Then the mixture of four interfering bacterial strain and the mixture of four interfering bacterial strain added S. typhimurium were analyzed. As shown in Fig. 4, a vivid color change from yellow to pink was observed in the presence of S. typhimurium alone and S. typhimurium mixed with other bacteria. As confirmed by the gray value, there was no statistically significant difference between the negative samples and reagent control under the same conditions (F = 0.822, p > 0.05).
All the above results proved that our proposed method could achieve sensitive and selective S. typhimurium detection against potential interference.
Detection of S. typhimurium in real samples
The accuracy and applicability of our proposed method were further explored by conducting three replicate analyses of S. typhimurium in milk. The sterility of milk samples was verified by three replications by the plate culture method (Fig. S6). In order to reduce or eliminate matrix interferences completely, milk samples were diluted 100-fold with DDW and artificially spiked with various amounts of S. typhimurium (from 1 × 102 to 1 × 106 cfu/mL) to obtain the calibration curve. As expected, the linear range and the LOD for S. typhimurium were not interfered by matrix components (Fig. S7), which suggested that this method could be applied in milk samples analysis. The recoveries and relative standard derivations (RSDs) were further investigated and summarized in Table 1. Because samples of commercially available milk were uncontaminated, a known amount of S. typhimurium was spiked in each sample. All the average recoveries for different concentrations (1 × 102, 1 × 104, 1 × 106 cfu/mL) of S. typhimurium in milk samples were in the range of 92.48–94.05% with the RSDs lower than 10%. Simultaneously, it should be noted that a bare-eye distinguishable color was observed in all positive samples (Table 1). The LOD for S. typhimurium was determined to be 60 cfu/mL (3σ/slope, where σ is the standard deviation of 10 blank samples) in the milk. These results indicated that the setup method has a strong anti-interference ability for accurately evaluating S. typhimurium levels in complex food matrices.
As illustrated in Table S1, our proposed sensing methodology may be one of the most sensitive colorimetric assays comparable with the previous methods. Yi J et al. presented the CMCS-Apt-AuNP composites as molecular recognition elements to identify of S. typhimurium [37], where the carboxymethyl chitosan (CMCS) was only used as a carrier for target. However, apt-Fe3O4@Ag NPs has dual function involving magnetic separation of target and reaction as substrate in our study. Srisa-Art et al. reported a colorimetric PAD combined with an immunomagnetic separation (IMS) for detecting S. typhimurium [38]. This method is portable and sensitive but more time-consuming (90 min) than our assay method (< 1 h). Our entire analysis procedure could be completed within 1 h, including the incubation of apt-Fe3O4@Ag NPs with sample and magnetic separation (47 min), the etching apt-Fe3O4@Ag NPs’ shell by H2O2 and magnetic separation (2 min), collecting free Ag+ in the supernatant and the incubation of urease with Ag+ (10 min), and coloration using urea/phenol red impregnated paper (about 10 s). However, there are some limitations of this approach. We also conducted a 100-fold interference experiment to explore the specificity with high concentration bacteria. As shown in Fig. S8, there was no significant difference between different bacteria with high concentration. It is due to the non-specific adsorption between excessive concentration of bacteria and nanoprobes that lead to poor specificity. To address this limitation, milk samples must be diluted many times before the method can be applied in practice. Obviously, the specificity of our method was almost not interfered with the proper concentration of other bacteria (Fig. 4). The other restriction is the lack of high resolution of detection system when the color of the test paper had small changes, which is expected to find alternative material of the test paper to make the color change more distinguishable or employ more advanced equipment to obtain images. Overall, this proposed method could be expanded to the application in the other pathogens’ detection by modifying the aptamer against different bacteria on Fe3O4@Ag NPs.
Conclusion
Herein, we have successfully developed a simple, rapid, and reliable colorimetric assay for S. typhimurium detection. Three main highlights were exhibited in this study: (1) The apt-Fe3O4@Ag NPs as multifunctional hybrid nanoprobes are not only intended for enrich and magnetic separation of target, but also its silver shell can be used as the reaction substrate in assay process; (2) the multifunctional hybrid nanoprobe made the operation simpler; and (3) the PADs using urea/phenol red impregnated paper is simple and low-cost. With the resolution of detection system be further improved, this method will be widely applicable for rapid on-site detection of S. typhimurium and other foodborne pathogens to promote food safety and hygiene. In addition, this method provided ideas for the application of apt-Fe3O4@Ag NPs and PADs in the detection of other bacteria. In the future, we will further exploit the potential of apt-Fe3O4@Ag NPs and realize more other target detection.
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Funding
The authors thank the financial support from the National Natural Science Foundation of China (Grant No. 81872668), Jilin Province Development and Reform Commission (Grant No. 2019C049-3), Health commission of Jilin Province (Grant No. 2018Q033), Norman Bethune Health Science Center of Jilin University (Grant No. 2018A05), and Jilin Province Science and Technology Development Plan Item (Grant Nos. 20200602010ZP, 20200403035SF, and 20180201053SF).
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Wei, S., Li, J., He, J. et al. Paper chip-based colorimetric assay for detection of Salmonella typhimurium by combining aptamer-modified Fe3O4@Ag nanoprobes and urease activity inhibition. Microchim Acta 187, 554 (2020). https://doi.org/10.1007/s00604-020-04537-8
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DOI: https://doi.org/10.1007/s00604-020-04537-8