Abstract
Soil microbes constitute an important control on nitrogen (N) turnover and retention in arctic ecosystems where N availability is the main constraint on primary production. Ectomycorrhizal (ECM) symbioses may facilitate plant competition for the specific N pools available in various arctic ecosystems. We report here our study on the N uptake patterns of coexisting plants and microbes at two tundra sites with contrasting dominance of the circumpolar ECM shrub Betula nana. We added equimolar mixtures of glycine-N, NH +4 –N and NO −3 –N, with one N form labelled with 15N at a time, and in the case of glycine, also labelled with 13C, either directly to the soil or to ECM fungal ingrowth bags. After 2 days, the vegetation contained 5.6, 7.7 and 9.1% (heath tundra) and 7.1, 14.3 and 12.5% (shrub tundra) of the glycine-, NH +4 - and NO −3 –15N, respectively, recovered in the plant–soil system, and the major part of 15N in the soil was immobilized by microbes (chloroform fumigation-extraction). In the subsequent 24 days, microbial N turnover transferred about half of the immobilized 15N to the non-extractable soil organic N pool, demonstrating that soil microbes played a major role in N turnover and retention in both tundra types. The ECM mycelial communities at the two tundras differed in N-form preferences, with a higher contribution of glycine to total N uptake at the heath tundra; however, the ECM mycelial communities at both sites strongly discriminated against NO −3 . Betula nana did not directly reflect ECM mycelial N uptake, and we conclude that N uptake by ECM plants is modulated by the N uptake patterns of both fungal and plant components of the symbiosis and by competitive interactions in the soil. Our field study furthermore showed that intact free amino acids are potentially important N sources for arctic ECM fungi and plants as well as for soil microorganisms.
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Introduction
Soil microbial biomass may constitute an important control on nutrient availability, turnover and retention in many ecosystems where nitrogen (N) availability is the main constraint on primary production and the proportion of microbial to plant biomass N is high (Jonasson et al. 1999; Lipson et al. 1999; Grogan and Jonasson 2003). Several studies have shown a large initial microbial immobilization of N added to nutrient-deficient soils in arctic and alpine tundra (Schimel and Chapin 1996; Grogan and Jonasson 2003; Nordin et al. 2004) and in boreal and temperate forest (Näsholm et al. 1998; McFarland et al. 2002; Finzi and Berthrong 2005). The high microbial N sequestration in these studies was irrespective of whether the added N was in amino acid, NH +4 or NO −3 form. Short-term microbial immobilization of added N, however, did not appear to lead to longer term increases of N bound in microbial biomass (Fisk and Schmidt 1996). A slow accumulation of N in plants has been observed in a few longer term studies over weeks to months (Schimel and Chapin 1996; McFarland et al. 2002; Grogan and Jonasson 2003). This accumulation was considered to be a likely consequence of the uptake of microbial re-cycled N (Kaye and Hart 1997; Hodge et al. 2000), but given the apparently superior competitive abilities of soil microbes, the mechanisms behind plant access to adequate amounts of nutrients for annual growth are still poorly understood (Schimel and Bennett 2004; Jones et al. 2005a).
The growing body of evidence on plant uptake capacity for low-molecular organic N (Kielland 1994; Näsholm et al. 1998; Svennerstam et al. 2007) demonstrates that many plants can short-circuit the microbial mineralization step and—to some degree—compete with the microbes for free amino acids that are often equally abundant as NH +4 and NO −3 in organogenic soils (Nordin et al. 2004). It has been suggested that differences in microbial and plant uptake capacities for specific N compounds may be complementary and, thus, provide specialized niches for coexisting plants and microbes (Lipson and Näsholm 2001). In northern ecosystems, the presence of mycorrhizal symbioses in most plant species complicates the studies of pathways for nutrient partitioning between plants and soil microbes (Lindahl et al. 2002). The most abundant mycorrhizal symbioses in arctic ecosystems are ericoid mycorrhiza (ERM) in ericoid dwarf shrubs and ectomycorrhiza (ECM) in shrubs and herbs belonging to the genera Salix, Betula, Alnus, Dryas, Polygonum and Kobresia (Michelsen et al. 1998; Clemmensen and Michelsen 2006). Most of the ERM and ECM fungal species release exo-enzymes to hydrolyse N from more complex organic molecules, such as chitin and protein (Leake and Read 1997), and possess cell membrane transporters for oligopeptides and amino acids as well as for NH +4 and NO −3 (Smith and Read 1997; Benjdia et al. 2006). Thus, plants with ERM and ECM mycorrhizal associations have a clear advantage over non-mycorrhizal plants in terms of being able to access N. This advantage is particularly pronounced in ecosystems where most of the N originates from decaying microorganisms and plant material and enters the soil in complex forms, such as protein (Weintraub and Schimel 2005) or chitin (Gooday 1990).
In comparison with ERM fungi, ECM fungi generally have a more widely distributed network of external mycelium extending from the mycorrhizal structures on the root tips and forming about 75% of the absorptive surface area in ECM plant roots (Smith and Read 1997; Simard and Durall 2004). Their comparable growth pattern, physiology, small size, high surface–volume ratio and rapid growth rates allow ECM fungi to compete strongly with saprotrophic fungi for limiting soil nutrients throughout the heterogeneous soil environment (Leake et al. 2002). The timing of ECM fungal transport of N to plants, however, may depend on the strengths of both the mycelial and plant sinks (Simard and Durall 2004), and N retention within the hyphal network may partly explain slow plant accumulation of added N in nutrient-deficient ecosystems (Aber et al. 1998). Furthermore, the abilities to access different inorganic and organic N pools differ among the large number of ECM fungal species (Leake and Read 1997), and associations with different ECM fungal communities in different ecosystem types may facilitate the broad ecological amplitudes observed in some ECM plant species (van der Heijden and Vosatka 1999). Thus, more focus on mycorrhizal N uptake patterns is needed to understand plant–microbial N partitioning in ecosystems where mycorrhizal plants dominate the vegetation (Chalot and Brun 1998).
In the study reported here, we explored soil microbial and plant N uptake throughout the growing season at two subarctic tundra sites of contrasting soil nutrient availability and abundance of the ECM shrub Betula nana. At both sites, we measured soil pools of total dissolved N (TDN), amino acids, NH +4 and NO −3 and performed 15N-tracer studies in which three main aspects were varied in a factorial design: 15N form added (glycine, NH +4 or NO3), duration of 15N incubation (48 h or 26 days) and method of 15N addition (15N added to soil or to ECM mycelial ingrowth bags). We hypothesized: (1) that microbes would be superior competitors in the short term but that plants would access part of the added N in the longer term; (2) that the availability of different N forms at the two sites would, at least partly, explain N uptake patterns in plants; (3) that the ECM B. nana would access different proportions of the three N forms at the two sites as a consequence of an association with ECM fungal communities with site-dependent N-form preferences.
Material and methods
Study sites
The study was conducted during the summer of 2003 at two treeless tundra sites located just below the forest line near Abisko in Northern Sweden. Based on vegetation characteristics, the two sites, designated heath and shrub tundra, respectively, were chosen to represent different soil nutrient availability levels. The heath tundra was located approximately 0.5 km south of Abisko on the upper part of a gentle eastward-facing slope (68°20,786′N, 18°49,515′E; approx. 415 m a.s.l.). The organic layer was about 10 cm deep, well drained and resting on rocky mineral soil (Table 1). The vegetation was up to 15 cm high and dominated by ericoid dwarf shrubs, mainly Vaccinium uliginosum L., Andromeda polifolia L. and Empetrum hermaphroditum Hagerup, and with low-statured Betula nana L. and herbs, mainly Carex spp., Equisetum spp., Tofieldia pusilla (Michx) Pers., Silene acaulis (L.) Jacq. and Astragalus frigidus (L.) A., as sub-dominants [Electronic Supplementary Material (ESM) S1]. The shrub tundra was located approximately 2 km SE of Abisko in a northward-facing, sloping depression (68°20,511′N, 18°50,562′E; approx. 415–422 m a.s.l.). The soil had a loose, moist, 15- to 50-cm-deep organic horizon (Table 1), and there were small tracks with running water between tussocks in the lowest part of the depression. This site was equally dominated by ericoid dwarf shrubs (the same species as at the heath) and deciduous shrubs (B. nana and occasional Salix spp.), the latter forming an up to 50-cm-high canopy layer. The most common herbs were Equisetum spp. and Carex spp. In the bottom layer, moss covered most of the ground, at the heath along with occasional lichens.
The climate is subarctic, with mean summer and winter temperatures of 10 and −9°C, respectively, and with an annual precipitation of approximately 300 mm of which one-third falls as summer precipitation. The snow-free season usually lasts from late May to early October (Royal Swedish Academy of Sciences, Abisko Scientific Research Station, http://www.ans.kiruna.se/ans.htm).
Setup of labelling experiment
On 18–23 June, six approximately 20-m2 replicate blocks of similar vegetation were established at each site. Thirteen separate plots of 0.2 × 0.2 m each, including the rooting point of at least one B. nana ramet, were selected within each block and were randomly assigned to one of 12 treatment combinations (see below) or as an untreated control. The distance between individual plots was 1–3 m. Cylindrical fungal ingrowth bags (Wallander et al. 2001), approximately 8 cm high and 4 cm in diameter, constructed of nylon mesh (50-μm mesh size; Sintab, Sweden) and filled with approximately 120 g acid-washed sand were placed in half of the treatment and the control plots. In each plot, five bags were inserted vertically with the upper end level with the organic soil surface. One bag was placed in the centre of the 0.2 × 0.2-m plot, and one was placed in the centre of each of the four 0.1 × 0.1-m sub-squares. The surface litter and moss layer was replaced over the bags, which were left for fungal ingrowth during the following month.
On 18 and 22 July, the heath and shrub tundra soils were isotopically labelled to investigate N uptake in plants and microbes. We added three different 15N forms, either directly to the soil or to the ingrowth bags, and incubated the soils for either 2 or 26 days before harvest (i.e. at each site, a 3 × 2 × 2 factorial design with n = 6). The three N forms (glycine, NH +4 and NO −3 ) were combined in mixtures to make up equal proportions of N, and one N form was labelled with 15N at a time, with glycine also labelled with 13C (Nordin et al. 2001). The 15N compounds were U–13C–15N-glycine (15N, 96–99 atom%; 13C, 98 atom%; Cambridge Isotope Laboratory, Andover, MA), 15NH4Cl (98 atom%) and K15NO3 (98 atom%). The mixtures were distributed in five points in each treatment plot, corresponding to the positions of the ingrowth bags, by inserting a syringe to a depth of 5 cm in the soil or the bags and pulling it up as the solution was dispensed. Nitrogen was added at rates equivalent to 390 mg N m−2, including 136 mg 15N m−2. The N mixtures were added as a 20 ml solution (54.4 mM 15N) to each of the five points in soil-injected plots and 5 ml of a more concentrated solution (217.6 mM 15N) to each point in bag-injected plots.
Sample processing
Labelled plots were harvested after 2 and 26 days. The five ingrowth bags per plot were retrieved and the contents combined to make up one sample. The entire 20 × 20-cm plots were cut out to a depth of 10 and 15 cm below the soil surface at the heath and shrub tundra, respectively, and all vegetation rooted within the plot was included. Unlabelled control plots were harvested in the same way on 21–23 August. A set of soils for supplementary analyses of nutrient concentrations was sampled on 18 July by harvesting six 10 × 10-cm soil cores at random positions at each site. All samples were kept in separate plastic bags at +2°C until sorted. Sample processing was completed within 2–3 days.
The individuals of B. nana were carefully sorted out of the sample in intact form, whereas the rest of the vegetation was cut at the soil surface and pooled as aboveground plant material. Betula nana was separated into leaves, stems + coarse roots and fine roots; the latter represented the non-woody part of the root system, less than 0.5 mm in diameter. The remaining sample of organic soil, including roots and rhizomes of unseparated species, was homogenized by cutting the soil in approximately 2 × 2 × 2-cm cubes. Roots and rhizomes were sorted out of 20–30 randomly chosen cubes to obtain an approximately 50-g sample of fresh soil and a subsample of belowground plant biomass. All plant samples were immersed in several baths of 0.5 mM CaCl2 to remove any adhering 15N label from the exterior surfaces. The plant samples and the remaining unsorted bulk soil samples were dried at 70°C for 48 h. The sand from the ingrowth bags was extracted in water, and mycelium floating in the water phase was collected on a nylon mesh and freeze-dried.
Soil analyses
Fresh soil samples were mixed thoroughly, and a 10-g subsample was used to determine soil moisture as mass loss after freeze-drying and soil organic matter (SOM) content as loss on ignition at 660°C for 6 h. A 10-g subsample was extracted with 50 ml 0.1 M K2SO4 (for control soils only: another 10 g with 50 ml demineralized water was used for amino acid analysis) for 1 h and filtered through glass fibre filters (Whatman GF/D; 2.7-μm mesh size). Another 10 g fresh soil was fumigated with chloroform for 24 h to release C and N fixed in the microbial biomass before extraction with K2SO4 (Brookes et al. 1985). The extracts were kept frozen until further analyses.
Organic C in the fumigated and nonfumigated extracts was determined on a total organic C analyser (Schimadzu 5000A, Kyoto, Japan), and total N was determined after persulfate digestion (Zhou et al. 2003) followed by the analysis of NO −3 –N using an autoanalyser (Fiastar 5000, Foss Tecator, Sweden). Dissolved total N (DTN) was measured as the N content of digested nonfumigated extracts, i.e. soluble organic N plus inorganic N. Microbial biomass C and N pools were calculated as the differences between fumigated and nonfumigated extracts (Brookes et al. 1985; Vance et al. 1987). We used extractability factors of k EC = 0.45 and k EN = 0.40 to account for the microbial biomass C and N pools that were not chloroform-labile (Schmidt et al. 2002).
In control soils, NH +4 –N and NO −3 –N pools were analysed in K2SO4 and water extracts. Amino acid concentrations were analysed in water extracts using an ion chromatography system from Dionex, equipped with electrochemical detection with a gold amperometry cell and the analytical column AminoPac PA10. Fungal biomass was estimated in freeze-dried, ground soil (approx. 0.3 g) by the ergosterol assay (Nylund and Wallander 1992) as modified by Clemmensen et al. (2006). Ergosterol was quantified on a reverse-phase high-performance liquid chromatography (HPLC) system with UV detection at 282 nm. Fungal biomass C was estimated using conversion factors of 3.5 μg ergosterol and 430 μg C mg−1 fungal biomass (Salmanowicz and Nylund 1988; Montgomery et al. 2000).
15N and 13C isotopic analyses
Dried plant and soil samples were ground to a fine powder, and isotopic 13C:12C and 15N:14N ratios and C and N concentrations were analysed on an isotope ratio mass spectrometer (IRMS; Isoprime, Micromass-GV Instruments) coupled to a Eurovector CN elemental analyser. The mycelia from the ingrowth bags were rinsed under a dissection microscope for removal of organic particles that contaminated samples under bag recovery, while sand particles (containing no C or N) were left in the samples analysed on the IRMS. Mycelial biomass was estimated from measured C mass by assuming 400 μg C mg−1 mycelium (Clemmensen et al. 2006).
Microbial 15N atom% was determined using the acid-trap diffusion technique on digested extracts (Stark and Hart 1996). Five millilitres of fumigated digests or 10 ml nonfumigated digests were transferred to 60 ml HDPE bottles, and nonfumigated samples were spiked with 70 μg N of known 15N:14N ratio to increase the total N contents to the optimum of 100–150 μg N required for the IRMS analyses. Devarda’s Alloy (0.4 g) was added per 10 ml of sample to reduce NO −3 –N to NH +4 –N, and 0.75 g KCl per 10 ml of sample was added to increase the ionic strength of the digests. In order to raise the pH of the samples to above 13, we added 5 M NaOH (1 ml per 10 ml of sample), and the bottles were immediately sealed with a cap suspending an acidified (15 μl 1.5 M H2SO4) quartz filter paper disc over the solution. The samples were incubated for 4 days on a shaking table at 50 rpm to trap all volatilized NH3 on the filter papers, which subsequently were dried in a desiccator and analysed on the IRMS. Standards of known atom% 15N included throughout the procedure showed 75–100% recovery of N. Microbial 13C atom% in control and glycine-labelled soils was determined by freeze-drying of fumigated and nonfumigated K2SO4 extracts (Ryan and Aravena 1994). The freeze-dried volumes were kept as low as possible (0.250 ml of fumigated and 1 ml of nonfumigated extracts, corresponding to 25–100 μg C) to avoid the interference of salt with the IRMS analysis. Isotopic ratios were corrected for the isotopic pool dilutions caused by blank contamination and spiking.
Atom% enrichment for each component was determined by subtracting the natural 13C or 15N abundance of the control samples from the atom% of the labelled samples. Control values for each pool were averaged within each site. The percentage of label recovered in a particular pool was determined by multiplying the 13C or 15N atom% enrichment of the pool by the pool size and dividing this value by the amount of label added; for example, for N: (atom% 15Nlabelled − atom% 15Ncontrol) × N pool size/total added 15N.
Total ecosystem 15N recovery, defined as the sum of 15N recovery in the two complementary pools, bulk soil and total plant biomass, ranged between 40 and 110% in soil-injected plots and between 20 and 100% in bag-injected plots (ESM S2). This estimate of total ecosystem 15N recovery is independent of uncertainties in extractability of microbial biomass 15N, unlike earlier studies of Schimel and Chapin (1996) and Grogan and Jonasson (2003). To explore the proportional partitioning of 15N into major ecosystem pools, the total ecosystem 15N recovery of each plot was set to 100%, and 15N recovery in each pool was rescaled proportionally before mean recoveries were calculated. This rescaling assumes that the relative recovery of 15N is representative of the movement of N from the added N form independently of whether the isotope was under- or over-recovered (Finzi and Berthrong 2005).
Statistical analyses
Data means were compared using analyses of variance (ANOVAs) with type III sums of squares by the GLM procedure, with significant differences evaluated by Tukey’s HSD multiple comparison of means test (SAS Institute v8.02, 2001; SAS Institute, Cary, NC). Results with P < 0.05 were regarded as statistically significant, although marginally significant (P < 0.10) results are also reported. Pool sizes in control soils were analysed with two-factor ANOVAs including site and date as main factors (all samples were taken from separate plots). For each labelling method, treatment effects were analysed with three-factor ANOVAs including site, incubation period and N treatment as main factors. For each site and incubation period, treatment means were compared with one-factor ANOVAs. All multi-factor models were fully factorial. Block was included in models whenever the block effect was below P = 0.20 to account for any underlying gradients at the sites not related to the treatments. Prior to performing the ANOVAs, we analysed the data for homogeneity of variances with Levene’s test and, if necessary, carried out the appropriate root- or log-transformations.
The relationship between 13C and 15N enrichment in microbial biomass, mycelia and plant fractions from the U–13C–15N-glycine treatment was tested with simple linear regressions for each site and time period separately. There were no effects of labelling method (i.e. soil vs. bag injection) on microbial biomass regressions, and data from the two methods were pooled. Regression slopes were compared using two-tailed t tests. A conservative estimate of the fraction of 15N taken up as intact glycine was obtained by dividing the slopes of the regression lines with a slope of 2, the 13C:15N ratio of the added glycine (Näsholm et al. 1998).
Results
Soil C and N pools
The SOM content on a mass basis was similar at the two sites, whereas soil bulk density was much lower at the more moist shrub tundra site (Table 1). Soil microbial biomass C and N concentrations were lower at the heath than at the shrub site, whereas fungal biomass C was higher, indicating that fungi dominated the microbial biomass more at the heath tundra (Table 2).
The concentrations of soluble soil C and N fractions were significantly, or for amino acids non-significantly, higher at the shrub tundra than at the heath tundra, except for the NO −3 concentration, which was marginally significantly higher at the heath tundra (Table 2). The concentration of DTN at the shrub tundra, 91–98 μg g−1 DM soil, was about twofold higher than that at the heath tundra, 43–55 μg g−1 DM soil (Table 2). Generally, NH +4 –N made up approximately 75% (1.4–4.5 μg g−1 DM) of the total available N and amino acids approximately 25% (0.4–1.8 μg g−1 DM), whereas NO −3 –N contributed less than 3% (11–47 ng g−1 DM). At both sites, the concentrations of water-extractable NH +4 –N and total amino acid N increased from July to August, whereas the concentration of DOC decreased (Table 2).
Among the amino acids, arginine made up approximately 46% of the total amino acid N at the shrub tundra and 2 and 68% of total amino acid N at the heath tundra in July and August, respectively. Alanine, glycine, valine, glutamic acid and serine constituted most of the remaining amino acid pool at both sites (ESM S3).
Partitioning of 15N label into major ecosystem pools
Immediately after the addition of tracers, the pools of glycine-, NH +4 - and NO −3 –15N made up, on average, 99.7, 92.3 and 99.7% of the total glycine-, NH +4 - and NO −3 –N pools at the heath tundra and 99.6, 89.6 and 99.9% at the shrub tundra. These 15N amounts corresponded to 16 and 15% of the DTN pools at the heath and shrub tundra, respectively, including the added, unlabelled N. After 2 days, the DT15N constituted less than 0.1% of the DTN pool at both sites.
Ecosystem 15N recovery (i.e. plant + soil) tended to decrease with time in the soil-injected plots, probably because of label movement out of the harvested area (ESM, S2). In contrast, ecosystem 15N recovery increased with time in the bag-injected plots because of the movement of the label out of the bags into the bulk soil. Ecosystem 15N recovery was also significantly affected by the 15N form added both in soil- and bag-injected plots; this is probably related to differences in the mobility of the three N forms combined with methodological uncertainties in the 15N recovery estimate (see discussion in Grogan et al. 2004).
The proportional partitioning of the 15N recovered in the soil–plant system, however, showed a similar pattern for soil- and bag-labelled plots (Fig. 1). Two days after labelling, the proportion of 15N in plants was 5–10% of the recovered 15N at the heath tundra and 8–16% at the shrub tundra; after 26 days, the corresponding proportions were 10–20 and 15–25% (Fig. 1). Two days after labelling, the 15N recovery in the microbial biomass at both sites did not differ from 15N recovery measured in the bulk soil, implying that nearly all 15N in the bulk soil was immobilized by microbes (Fig. 1). Over the following 24 days, the 15N recovery in the microbial biomass decreased to about half (heath) and two-thirds (shrub) of the bulk soil 15N. At both harvests, very small proportions—<0.5% at the heath tundra and 0.5–1% at the shrub tundra—of the recovered 15N were found in the DTN pool (Fig. 1).
Plants acquired a larger proportion of NO −153 N than glycine- and NH +4 –15N when added to the soil. With 15N-label added to the bags, plants showed a similar pattern at the heath, but they acquired more NH +4 –15N than glycine-15N at the shrub tundra (Fig. 1). In contrast, there were no significant differences in the 15N recovered from the three 15N sources in terms of microbial biomass N or DTN pools, with the exception of a marginally significantly higher recovery of glycine- than of NO −3 –15N in microbes after 26 days at the heath tundra (Fig. 1).
ECM mycelial vs. B. nana N uptake patterns
Natural 13C abundance (δ13C) of mycelia extracted from the unlabelled ingrowth bags ranged between −26.9 and −26.6 ‰ at the heath tundra and between −27.7 and −27.0 ‰ at the shrub tundra. These values are well within the range of the 13C abundance of ECM fruit-bodies in a nearby heath (Clemmensen et al. 2006), strongly indicating an ECM origin of the bulk of the mycelia (Wallander et al. 2001). The mycelia showed strong N-form preferences at both sites (Fig. 2). Mycelial net uptake of NH +4 –15N after 26 days was 10.0- and 6.3-fold higher than the net uptake of NO −3 –15N at the heath tundra and shrub tundra, respectively, and the net 15N uptake from the glycine source was 5.1-fold higher than the NO −3 –15N uptake at the heath but similar to the NO −3 –15N uptake at the shrub tundra. The mycelial biomass in the bags was higher at the shrub tundra than at the heath tundra and increased strongly during the incubation period at both sites (Fig. 2). The mycelial biomass did not differ significantly among treatments, but mycelial growth was stimulated by the N additions, as shown by the higher mean biomass in treated bags in August (182 ± 25 at the heath tundra and 255 ± 42 mg m−2 at the shrub tundra) than in untreated control bags (77 ± 24 at the heath tundra and 87 ± 26 mg m−2 at the shrub tundra; P < 0.05, t tests). Net 15N accumulation in the mycelia represented less than 0.5% of the total 15N amount added to the bags. The mycelial C:N ratios of approximately 20 were largely unaffected by the additions of N, but they were marginally higher (P = 0.09) at the heath tundra than at the shrub tundra (Fig. 2).
Betula nana, the dominant ECM plant species at both sites, also showed strong N uptake patterns. When the label was added directly to the soil, 15NH +4 addition lead to a higher 15N concentration in the fine roots than the other two 15N treatments (Fig. 3). When the label was added to the ingrowth bags, the 15N concentrations in the fine roots were generally higher at the shrub tundra than at the heath tundra, and 26 days after labelling the shrub tundra 15N concentrations were 4.5- and 5.3-fold higher in the 15N-glycine and 15NH +4 treatments, respectively, than in the 15NO −3 treatment (Fig. 3). The 15N concentrations were generally two orders of magnitude lower in the fine roots than in the mycelia.
The net 15N accumulation pattern in whole plants generally mirrored fine-root 15N uptake, although net uptake was significantly higher at the shrub tundra than at the heath mainly as a result of the larger biomass of B. nana (Fig. 3). Net 15N uptake increased with time at the shrub tundra but not at the heath, as seen by the significant interaction between site and time in the models. Overall, in the soil-labelled plots, 15N recovery from the 15NH +4 source was higher than that from the 15N-glycine source, whereas the net uptake of 15NO −3 did not differ significantly from the uptake of the other N sources.
Uptake of intact glycine
Uptake of glycine-derived 13C and 15N was correlated in both soil microbial biomass and in ECM mycelia, although not significantly so in mycelia at the heath, presumably because of low replication. The correlation suggests that glycine was absorbed, at least partly, in intact form (Fig. 4). After 2 days, the regression slopes were lower than (microbial biomass) or similar to (mycelia) the ratio of two in the added U–13C–15N-glycine, whereas after 26 days, all regression slopes were significantly lower than 2. The fraction of glycine-derived 15N taken up as intact amino acid estimated after 2 days was 55 and 42% of the total 15N uptake from the labelled glycine source for the microbial biomass and 73 and 67% for mycelia at the heath tundra and shrub tundra sites, respectively. In ECM mycelia, the regression slopes declined strongly with time at both sites (P < 0.05), whereas in the microbial biomass, the slope only declined significantly at the shrub tundra. Similarly, the 13C–15N-ratios decreased strongly with time for mycelia but were unchanged with time for the microbial biomass (ESM, S4). We found no significant 13C–15N-correlations in plant fractions because of the large pool dilution of 13C in plant tissues. However, the plant 13C–15N-ratios were significantly different from zero 2 days after injections at both sites (mean − 95% confidence limit of the mean exceeded 0) (ESM, S4), indicating that plants took up part of the added 13C.
Discussion
Microbial control on growing season N cycling
Our tracer studies at two highly contrasting tundra sites revealed that soil microbial biomass constitutes a major short-term sink for exogenously added N, thereby confirming the few earlier field studies in arctic tussock or forest tundras (Schimel and Chapin 1996; Grogan and Jonasson 2003; Nordin et al. 2004). Both at the heath and shrub tundra, virtually all of the 15N recovered in the bulk soil was immobilized by microbes as early as 2 days following the addition of the 15N pulse, although microbial biomass contained only 6% (heath) and 11% (shrub tundra) of the native soil N pools. The strong decline in the proportion of label incorporated into soil microbes over the subsequent 24 days together with minor changes in 15N recovery in the bulk soil and the dissolved 15N pool indicates fixation of the label into stable soil organic N pools (Fig. 1). A similar pattern of label movement from microbes to bulk soil has been observed in taiga forest soils (McFarland et al. 2002) and in subarctic heath soils (Grogan and Jonasson 2003; Grogan et al. 2004). In the latter study, gaseous and leachate N losses were furthermore shown to be minimal (Grogan et al. 2004). This pattern suggests that microbial biomass turnover paired with the exudation of 15N-containing substances, such as extracellular enzymes, is the most important mechanism of N retention and turnover in the ecosystems studied. In contrast, Kaye et al. (2003) suggested that stable 15N retention in floodplain soils mainly resulted from chemical reactions between added NH +4 and organic matter.
Alternatively, we cannot exclude that the microbial 15N decline could partly have resulted from the methodological procedures applied, as freshly assimilated label may be more chloroform labile than the total microbial N pool, which was used for calibrating the extraction factors. If this was the case, it could have led to an overestimation of 15N recovery in the microbial biomass 2 days after the label addition (Schimel and Chapin 1996). We believe, however, that this explains only a minor part of the change because the decrease in microbial 15N observed by Grogan and Jonasson (2003) occurred in the growing season in the year following 15N additions and could not have been affected by changes in chloroform lability. Furthermore, the 15N recovery in microbes after the longer term incubations may be underestimated because the proportion of label incorporated into recalcitrant cell-wall constituents increase with time after label addition, when uptake of the native soil N pools becomes more important.
The initial 15N net uptake by plants was an order of magnitude lower than the uptake by microorganisms, which is similar to the plant–microbial 15N partitioning found in previous short-term tracer studies in arctic tundra (Schimel and Chapin 1996; Grogan and Jonasson 2003; Nordin et al. 2004). Pulse labelling studies like ours may even overestimate the natural uptake rate by plants, as plants are more competitive for small N compounds at high soil solution concentrations because the uptake capacity of the microbial communities may become saturated (Vinolas et al. 2001; Jones et al. 2005b). Regardless of this uncertainty, our study demonstrates that subarctic plants can potentially take advantage of discrete incidents of increased fluxes of all three forms of available N.
After the initial, rapid N uptake, the plants presumably sequestered additional 15N from the fraction initially immobilized by microbes. Hence, while microbes were efficient competitors for N in the short term, plants gained access to this N over longer term perspectives because of their longer tissue longevity and slower turnover (Hodge et al. 2000). Also, it is highly possible that some of the microbially immobilized 15N was taken up by mycorrhizal fungi and transferred directly to symbiotic plants with some time lapse, as ectomycorrhizal fungi are able to retain N even in situations in which their plant symbiont remains in a state of N limitation (Aber et al. 1998; Simard and Durall 2004). Unfortunately, there are no methods to distinguish label incorporation into functionally different microbial populations, such as the saprotrophic versus the mycorrhizal fungal pools in the soil. Ectomycorrhizal fungi at both of our tundra sites, however, showed great potential for proliferation in nutritional hot spots, as shown by the increased mycelial production in ingrowth bags following the N additions (Fig. 2). This suggests that ECM fungi captured the added N efficiently and transferred some of it to the plants and other parts of the mycelial systems (Perez-Moreno and Read 2000). Thus, it appears that soil microbes govern N transformations and provide plants with N during the arctic growing season, while plants sustain microbial activity and biomass through C-allocation below ground and, on longer terms, through their litter production.
N-form uptake patterns in plants and microbes
In contrast to some earlier studies (Kielland 1994; Nordin et al. 2001, 2004), we found no marked difference in N-form uptake patterns in plants that could be related to N-form prevalence at the two sites, although we cannot exclude that single plant species or functional groups may have shown distinct patterns that were masked by our pooling of plant species. This could be caused by the fact that although the total available N pool was larger at the shrub tundra than at the heath tundra, the proportional contributions by the three N forms were similar at the two sites; NH +4 –N made up about two-thirds of the available N pool, and free amino acids made up the rest, with a minor contribution by NO −3 –N. Furthermore, the high depletion rates of all added 15N forms suggest that the sizes of available soil N pools may be poorly related to N availability in these ecosystems. The sizes of the available N pool may depend more on the production rates of mineralized N together with the abundance and uptake kinetics of the biota present. The endogenous soil pools of all three N forms used in this study probably have very fast turn-over times (hours), as also indicated by studies in other organogenic soils (Stark and Hart 1997; Jones and Kielland 2002).
In both of the tundra types studied, plants generally competed better for added NO −3 than for glycine; to some extent, this was also true for NH +4 (Fig. 1). This result agrees with the only earlier field study of N uptake using N-form mixtures in arctic ecosystems that we are aware of, which showed a larger uptake of inorganic N (mostly NO −3 ) than of amino acid N by most plant species (Nordin et al. 2004). McKane et al. (2002) also found a high acquisition of NO −3 in comparison to other N forms in some tundra plants, although the N forms were not added together. The relatively higher mobility of NO −3 in the soil, as compared to the other N forms, may have contributed to high plant access to NO −3 ; the diffusion rate of NO −3 is fivefold higher than that of NH +4 and amino acids (Jones et al. 2005a).
Our in situ study clearly demonstrated that soil microbial biomass and ECM mycelia took up glycine–at least partly–in intact form. After an initial loss of glycine-derived 13C, the amount of microbial 13C decreased in proportion to or only slightly faster than microbial 15N, as shown by similar regression slopes and 13C:15N ratios at the two sampling dates. This relationship was probably due to the decarboxylation of the U–13C–15N-glycine within the first 2 days following its addition and the products being directly allocated to structural compounds that turned over with the microbial biomass (Vinolas et al. 2001; Persson et al. 2003). In contrast, plants and ECM mycelia lost a larger proportion of assimilated glycine-derived 13C than 15N; in plants, this probably occurred because the glycine was fully metabolized in the mycorrhizal roots before the N was transferred to the rest of the plant (Taylor et al. 2004). The generally lower 13C:15N ratios in all pools at the shrub tundra points to faster and more complete respiratory loss of glycine-derived 13C (Näsholm et al. 1998), which is probably linked to water limitation at the heath (Illeris and Jonasson 1999).
N uptake patterns in ectomycorrhizal fungi and plants
The total amount of 15N accumulated in the ECM mycelia within the ingrowth bags after 26 days corresponded to less than 0.5% of the added 15N pools. Even when the movements of 15N from the bags to the surrounding soil and plants are taken into account, we assume that the amount of label in the bags was much larger than the uptake capacity of the mycelia present and, hence, that mycelial 15N concentrations represent fungal N-form preferences rather than the outcome of competition with other soil organisms.
The ECM mycelia in the ingrowth bags strongly discriminated against NO −3 , which made up about 6% of the total N taken up from the N mixtures at the heath tundra and 12% at the shrub tundra, both in the short- and long-term incubations (Fig. 2). This is corroborated by pure culture studies where most ectomycorrhizal fungi grew better with NH +4 than with NO −3 (Finlay et al. 1992). Also, mycorrhizal roots had four- to 30-fold higher net uptake rates of glycine and NH +4 than of NO −3 at a range of concentrations (Wallander et al. 1997; Gessler et al. 2005). Thus, the low uptake preference for NO −3 compared to other N forms may be a common phenomenon in ECM fungi.
At the heath tundra, the ECM mycelia showed a stronger preference for glycine than for NO −3 , and glycine made up a larger proportion of total mycelial net N uptake here than at the shrub tundra (Fig. 2). Ectomycorrhizal fungal species vary widely in their uptake capacities for different N forms (Finlay et al. 1992; Leake and Read 1997). Hence, the difference in mycelial preference patterns between sites may be caused by different ECM fungi dominating the mycelial communities. At the heath tundra, with its tight N cycle, the ECM fungal community could be adapted to organic N acquisition, whereas at the shrub tundra, with its more open N-cycle, NH +4 seems to be the main N form taken up by the ECM fungal community.
The N-form preferences identified in ECM mycelia were not directly mirrored in the N uptake by B. nana, neither when the label was added directly to the soil nor when ECM mycelia in the ingrowth bags were provided label without competition from other biota. Unfortunately, the 15N enrichment level in B. nana was very low and variable at the heath when label was added to the ingrowth bags because of the low biomass of B. nana and small mass of ECM mycelia in the bags at the time of labelling. At the shrub tundra, however, when label was added to the mycelium, the uptake pattern in B. nana was different, with relatively lower uptake of NO −3 and a higher uptake from the glycine source than when label was added to the soil (Fig. 3). This result suggests that ECM mycelial communities dominated glycine uptake but played a minor role in plant NO −3 uptake. In laboratory studies, B. nana has been shown to depend upon ECM colonization for the utilization of glutamic acid or glycine as a sole N source for growth (Emmerton et al. 2001), which is in accordance with our results from the field. However, B. nana N uptake patterns were probably modified by competition for added 15N by saprotrophic microbes and other plant species, particularly when the label was added directly to the soil. Our results therefore demonstrate that the net N uptake by ectomycorrhizal plants is modulated by N uptake patterns of both fungal and plant symbionts and also affected by N sequestration by the free-living soil microbes.
Conclusion
We conclude that:
-
1.
Soil microbial biomass constituted the major short-term sink for N and played a major role in N turnover and retention in soils of contrasting arctic tundra ecosystems. However, plants slowly accumulated N initially immobilized by microbes.
-
2.
Both plants and microbes took up all added N forms, with plants generally getting access to N types in the order: NO −3 > NH +4 > glycine.
-
3.
ECM mycelia strongly discriminated against NO −3 and mycelial N uptake and transfer to ECM plants appeared to be dominated by glycine and NH +4 .
-
4.
Our study clearly demonstrated that glycine was taken up in intact form by soil microbial biomass, by ectomycorrhizal mycelia (first field evidence) and, to some extent, by plants.
-
5.
N uptake patterns in functionally and structurally different microbial communities and subsequent N transformations in soils should be further studied if we are to fully understand the N cycle of northern ecosystems.
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Acknowledgments
The authors are grateful for the excellent facilities and logistic support provided by the Abisko Scientific Research Station (ANS). We thank Pia Nielsen, Jane Pedersen, Jette Brandt, Anders Tesgaard, Kasper Andersen and Peter Jannerup for help in the field, and Karin Larsen and Esben Nielsen for assistance with laboratory analyses. Inger Kappel Schmidt kindly provided advice on the 15N diffusion technique, and three anonymous reviewers provided valuable critique on the manuscript. This research was funded by ANS, The Faculty of Science, University of Copenhagen and The Danish Natural Science Research Council.
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Communicated by Hakan Wallander.
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Clemmensen, K.E., Sorensen, P.L., Michelsen, A. et al. Site-dependent N uptake from N-form mixtures by arctic plants, soil microbes and ectomycorrhizal fungi. Oecologia 155, 771–783 (2008). https://doi.org/10.1007/s00442-008-0962-9
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DOI: https://doi.org/10.1007/s00442-008-0962-9