Abstract
Ovarian clear cell carcinoma (OCCC) is a subtype of epithelial ovarian cancer with characteristic biological features and aggressive clinical behavior. OCCCs show a pattern of gene mutations different from other type I ovarian malignancies, notably a higher frequency of PIK3CA mutations. In low grade serous ovarian cancer, KRAS and BRAF mutations are frequent, but little data are available on the mutational status of these genes in OCCCs. To clarify this issue, we designed a clinicopathological study with the aim to establish the incidence of KRAS, NRAS, and BRAF hot spot mutations in OCCC. Between December 2006 and June 2012, 22 patients with a proven diagnosis of OCCC were admitted to our Institutions. In all cases, final diagnosis was established according to FIGO and WHO criteria. All women received complete surgical staging. The PyroMark Q24 system (Qiagen GmbH, Hilden, Germany) was used for pyrosequencing analysis of KRAS, NRAS, and BRAF hot spot regions on 2.5-μm sections of formalin-fixed paraffin-embedded tissue from primary OCCC. Pyrosequencing analysis of KRAS, NRAS, and BRAF hot spot regions revealed the presence of mutations only at codon 12 in exon 2 of KRAS in 3 of 22 (14 %) cases. We found no mutations in the hot spot regions of NRAF (exons 2, 3, 4) or BRAF (exon 15). The median age of women with a KRAS mutated OCCC was 74 years. These OCCC were unilateral FIGO stage IA lesions in two cases associated with foci of endometriosis. We conclude that in 14 % of OCCCs, a KRAS mutation occurs in codon 2 exon 2. NRAS and BRAF mutations were not found.
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Introduction
Epithelial ovarian cancer (EOC) accounts for approximately 90 % of primary malignant ovarian tumors. It is a heterogeneous tumor category, classified in serous, mucinous, endometrioid, and clear cell histotypes, each with specific molecular characteristics and clinical outcome [1].
This classical histopathological classification of EOC has been recently revised, and currently, two broad categories are distinguished. Type I EOC (including low-grade serous, mucinous, endometrioid, and clear cell carcinoma) are confined to the ovary at diagnosis, grow slowly and are chemoresistant. Type II EOC (high-grade serous, undifferentiated carcinomas, carcinosarcomas) typically show poor histological differentiation, early extra-ovarian spread and respond well to platinum-based chemotherapy [2, 3]. Type I tumors often harbor somatic mutations of genes encoding protein kinases including KRAS, BRAF, PI3KCA, and ERRB2, along with other signaling molecules, such as CTNNB1 and PTEN. In contrast, Type II tumors generally lack these mutations but are characterized by chromosomal instability and high frequency of TP53 mutations [4–8].
In this complex scenario, ovarian clear cell carcinoma (OCCC) is considered an entity distinct from the above cited type I EOCs, due to its specific biological behavior. Recent findings have demonstrated that OCCCs typically show a higher frequency of PIK3CA mutations [9], which suggests that aberrations in telomere biology may play an important role in the pathogenesis of OCCC [10]. On the other hand, KRAS and BRAF mutations have been recognized as a frequent event in low grade serous ovarian cancer, but only few data are currently available on the mutational status of these genes in OCCCs. For these reasons, we designed a clinicopathological study with the aim to evaluate the incidence of KRAS, NRAS, and BRAF hot spot mutations in a consecutive single Institution series of patients with OCCC.
Material and methods
Patients
Between December 2006 and June 2012, 22 patients with a proven diagnosis of OCCC were admitted to the Gynecologic Oncology Unit of the Catholic University of the Sacred Heart. In all cases, histological diagnosis was established at the Department of Pathology of our Institution after an extensive and careful evaluation of tumor specimens by an experienced gynecological pathologist. In all cases, a final diagnosis of primary clear cell carcinoma of the ovary was made according to FIGO and WHO criteria [11]. All women received complete surgical staging, including the following: peritoneal washing, total hysterectomy, bilateral salpingo-oophorectomy, total omentectomy, peritoneal biopses, and pelvic/para-aortic lymphadenectomy up to the renal vessels. Patients gave written informed consent for clinical data to be collected and analyzed for research purposes. The study was approved by the local institutional review board.
Molecular analysis
The PyroMark Q24 system (Qiagen GmbH, Hilden, Germany) was used for pyrosequencing analysis of KRAS, NRAS, and BRAF hot spot regions on 2.5-μm sections of formalin-fixed paraffin-embedded tissue from primary OCCC.
In brief, all the slides were reviewed by a pathologist to evaluate the percentage of cancer cells (>50 % tumor cells was the base line requirement) before performing manual dissection of the tumor to avoid areas with tumor necrosis or few neoplastic cells. From these samples, DNA was extracted using QIAamp MinElute spin columns (Qiagen, GmbH, Hilden, Germany), according to the manufacturer’s protocol and the sequence of interest was amplified by PCR (Veriti 96 well Fast Thermal Cycler, Applied Biosystems Inc., Foster City CA). Using therascreen KRAS, NRAS and BRAF Pyro Kits CE (Qiagen GmbH, Hilden, Germany), all hot spot regions were analyzed and samples with a potential low-level mutation were reexamined in duplicates to arrive at a specificity of 0.98 and sensitivity of 0.99 [12–14]. The PyroMark TM Q24 software (Qiagen, GmbH, Hilden, Germany) was used for data analysis.
Results
Genomic profiling was conducted on a consecutive series of 22 women with OCCC. The clinicopathological characteristics of the study patients are summarized in Table 1. Our series confirms the trend toward presentation of OCCC at an early stage, with only 27 % of patients showing late stage disease at diagnosis. Furthermore, only one patient had bilateral ovarian lesions, and in 18 % of patients, OCCC occurred along with foci of endometriosis, an endometriotic ovarian cyst in one patient and pelvic endometrial lesions in another patient (Table 1).
Pyrosequencing analysis of KRAS, NRAS, and BRAF hot spot regions revealed the presence of mutations only at codon 12, exon 2, of KRAS in 3 (14 %) cases. The following mutations were found: p.G12V (gly12 → val12), p.G12A (gly12 → ala12), and p.G12S (gly12 → cys12) (Table 2). Pyrogram traces demonstrating three hot spot KRAS mutations at codon 12 of exon 2 are presented in Fig. 1. No mutations in the hot spot regions of NRAF (exons 2, 3, 4) and BRAF (exon 15) genes were found. Hematoxylin/eosin stained histological images of the three KRAS mutated cases are presented in Fig. 2. Two of the KRAS mutated OCCC showed a tubulocystic pattern, and the remaining case a papillary pattern. The median maximum diameter of KRAS mutated OCCC was 110 mm. The median age was 74 years compared to 49 years in KRAS wild type OCCC. All women with a KRAS mutated OCCC the tumor was unilateral, staged IA according to FIGO classification.
Discussion
OCCC accounts for 5 to 13 % of all epithelial ovarian malignancies [15]. From a clinical point of view, it usually occurs at a younger age than high-grade serous EOC [16]. It often presents as a pelvic mass confined to the ovary [17, 18], often arising in association with foci of endometriosis [17]. Moreover, the clinical behavior of OCCC is aggressive, with a low response rate to standard platinum-based chemotherapy [19–21] and poor prognosis compared to high-grade serous EOC [19].
OCCCs are generally p53 wild-type, with a low frequency of BRCA 1 and 2 germline mutations [22–25], and a low level of chromosomal instability. OCCCs express high levels of HIF1a (hypoxia inducible factor 1 alpha), and phosphoinositide 3-kinase catalytic alpha (PI3KCA) mutations are found in around 40 % of cases [26–29]. The proportion of HER2/neu expressing cases of OCCC is 2.5 to 10-fold higher than that of type I and II ovarian tumors, suggesting a potential role for HER2/neu inhibitors for treatment of this tumor [30].
However, despite these interesting data, the specific pathways involved in driving the aggressive biological features of OCCC are still not completely defined [31–33]. For these reasons, we studied mutational status of KRAS, NRAS, and BRAF in OCCC. The RAS-RAF-MEK-ERK-MAP kinase pathway is often affected in human cancer. KRAS, NRAS, and BRAF are members of the RAS/RAF/MEK/extracellular signal-regulated kinase/mitogen-activated protein kinase pathway, a well-characterized signaling mechanism that mediates cellular responses to growth signals [34]. These three genes are upstream activators of the mitogen-activated protein kinase (MAPK) cascade [35]. KRAS gene shows a missense point mutation in 25 % of all cancers, generally located in codon 12, 13, and 61 [36]. These KRAS mutations lead to constitutive activation of the protein, increasing GDP/GTP exchange or decreasing GTPase activity of the protein, which ultimately increases cell proliferation [37].
Mutations of KRAS and BRAF genes in noninvasive and invasive carcinomas of the ovary have been reported previously, and KRAS mutations are found in around 75 % of mucinous ovarian tumors [6, 9, 35, 38–41]. Furthermore, activating mutations of KRAS and BRAF are present in over half of type I EOC and serous borderline tumors. In contrast, they are very uncommon in high-grade serous [6] and endometrioid carcinomas [40, 42–45]. As regards OCCCs, few and contrasting data have been reported until now regarding the mutational status of KRAS and BRAF [40, 46]. Jones S et al, and Auner V et al, reported KRAS mutations in 4.7 and 26 % of OCCCs, respectively [47, 48] while Rechsteiner M. et al failed to observe KRAS mutations in a large cohort of OCCCs [49].
We observed a KRAS gene mutation in 14 % of OCCCs which seems significantly lower than in other ovarian carcinoma subtypes, especially mucinous tumors. This frequency of KRAS mutation is similar to that reported for ovarian endometrioid carcinomas (7 %), which supports the hypothesis of a common origin of these two tumor types [2, 3, 6, 9, 50, 51]. Interestingly, we found KRAS mutations only in codon 12, exon 2, but not in codon 13, exon 2 nor in NRAS or BRAF. These mutations correspond to the following amino acid substitutions: p.G12V (gly12 → val12), p.G12A (gly12 → ala12), and p.G12S (gly12 → cys12), in agreement with other studies [12, 48, 49, 52–54]. Interestingly, the commonly described p.G12D mutation was not found in our series, which emphasizes the specific biological features of OCCCs. Finally, we confirmed the absence of BRAF hot spot mutations in OCCCs [40, 49, 55, 56], making BRAF alterations a very rare event in ovarian cancer.
In conclusion, we found a KRAS mutation in codon 2 exon 2 in 14 % of OCCCs. Our findings confirm that EOC, is a heterogeneous group of entities characterized by different molecular signatures.
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Zannoni, G.F., Improta, G., Chiarello, G. et al. Mutational status of KRAS, NRAS, and BRAF in primary clear cell ovarian carcinoma. Virchows Arch 465, 193–198 (2014). https://doi.org/10.1007/s00428-014-1599-1
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DOI: https://doi.org/10.1007/s00428-014-1599-1