Summary
As an aid to the fission yeast genome project, we describe a database for Schizosaccharomyces pombe consisting of both genetic and physical information. As presented, it is therefore both an updated gene list of all the nuclear genes of the fission yeast, and provides an estimate of the physical distance between two mapped genes. Additionally, a field indicates whether the sequence of the gene is available. Currently, sequence information is available for 135 of the 501 known genes.
Article PDF
Similar content being viewed by others
Avoid common mistakes on your manuscript.
References
Wolf K, Burger G, Lang B, Kaudewitz F (1976) Mol Gen Genet 144:67–73
Fluri R, Coddington A, Flury U (1976) Mol Gen Genet 147:271–282
Nakanishi N, Yamamoto M (1984) Mol Gen Genet 195:164–169
Vassarotti A, Boutry M, Colson AM, Goffeau A (1984) J Biol Chem 259:2845–2849
Boutry M, Vassarotti A, Ghislain M, Douglas M, Goffeau A (1984) J Biol Chem 259:2840–2844
Toda T, Adachi Y, Hiraoka Y, Yanagida M (1984) Cell 37:233–242
Hiraoka Y, Toda T, Yanagida M (1984) Cell 39:349–358
Hindley J, Phear GA (1984) Gene 31:129–134
Uemura T, Yanagida M (1984) EMBO J 3:1737–1744
Vassarotti A, Friesen JD (1985) J Biol Chem 260:6348–6353
Aves SJ, Durkacz BW, Carr A, Nurse P (1985) EMBO J 4:457–463
Shimoda C, Hirata A, Kishida M, Hashida T, Tanaka K (1985) Mol Gen Genet 200:252–257
Thuriaux P (1985) Mol Gen Genet 199:365–371
Amstutz H, Munz P, Heyer WD, Leupold U, Kohli J (1985) Cell 40:879–886
Krupp G, Thuriaux P, Willis I, Gamulin V, Soll D (1985) Mol Gen Genet 201:82–87
Maundrell K, Wright AP, Piper M, Shall S (1985) Nucleic Acids Res 13:3711–3722
Fluri R, Kinghorn JR (1985) J Gen Microbiol 131:527–532
Maundrell K, Nurse P, Schonholzer F, Schweingruber ME (1985) Gene 39:223–230
Russell PR (1985) Gene 40:125–130
Balzi E, Di Pietro A, Goffeau A, van Heerikhuizen H, Klootwijk J (1985) Gene 39:165–172
Matsumoto S, Yanagida M (1985) EMBO J 4:3531–3538
Choe J, Schuster T, Grunstein M (1985) Mol Cell Biol 5:3261–3269
Lang BF, Ahne F, Bonen L (1985) J Mol Biol 184:353–366
Heyer WD, Sipiczki M, Kohli J (1986) Mol Cell Biol 5:80–89
Ulaszewski S, Coddington A, Goffeau A (1986) Curr Genet 10:359–364
Hayles J, Beach D, Durkacz B, Nurse P (1986) Mol Gen Genet 202:291–293
Kishida M, Shimoda C (1986) Curr Genet 10:443–447
Elliott S, Chang CW, Schweingruber ME, Schaller J, Rickli EE, Carbon J (1986) J Biol Chem 261:2936–2941
Sackett DL, Lederberg S (1986) Exp Cell Res 163:467–476
Ogden JE, Fantes PA (1986) Curr Genet 10:509–514
Adachi Y, Toda T, Niwa O, Yanagida M (1986) Mol Cell Biol 6:2168–2178
Gancedo C, Llobell A, Ribas JC, Luchi F (1986) Eur J Biochem 159:171–174
Russell P, Nurse P (1986) Cell 45:145–153
Stotz A, Linder P (1990) Gene 95:91–98
Yang JW, Schweingruber ME (1990) Curr Genet 18:269–272
Hudson JD, Feilotter H, Young PG (1990) Genetics 126:309–315
Yamamoto M (1986) Microbiol Sci 3:234–237
Levin DE, Bishop JM (1990) Proc Natl Acad Sci U S A 87:8272–8276
Kawasaki I, Adachi N, Ikeda H (1990) Nucleic Acids Res 18:5888
Ghislain M, Goffeau A, Halachmi D, Eilam Y (1990) J Biol Chem 265:18400–18407
Kinghorn JR, Fluri R (1984) Curr Genet 8:99–106
Vissers S, Thuriaux P (1985) Curr Genet 9:561–565
Kohli J, Hottinger H, Munz P, Strauss A, Thuriaux P (1977) Genetics 87:471–489
Strauss A (1979) J Gen Microbiol 113:172–176
Strauss A (1979) Mol Gen Genet 172:233–241
Vassarotti A, Boutry M, Colson AM (1982) Arch Microbiol 133:131–136
Roy D, Fantes PA (1982) Curr Genet 6:195–202
Fantes PA, Creanor J (1984) J Gen Micro 130:3265–3274 3265-3270
Gygax A, Thuriaux P (1984) Curr Genet 8:85–92
Nurse P, Thuriaux P (1984) Mol Gen Genet 196:332–338
Beach DH (1983) Nature 305:682–688
Shimoda C, Uehira M (1985) Mol Gen Genet 201:353–356
Iino Y, Yamamoto M (1985) Mol Gen Genet 198:416–421
Nasim A, Smith BP (1975) Genetics 79:573–582
Nurse P (1985) Mol Gen Genet 198:497–502
Fukui Y, Kaziro Y (1985) EMBO J 4:687–691
Schweingruber ME, Shcweingruber AM, Schupbach ME (1982) Curr Genet 5:109–117
Durkacz B, Beach D, Hayles J, Nurse P (1985) Mol Gen Genet 201:543–545
Toda T, Nakaseko Y, Niwa O, Yanagida M (1984) Curr Genet 8:93–98
Heyer WD, Thuriaux P, Kohli J, Ebert P, Kersten H, Gerhke C, Kuo KC, Agris PF (1984) J Biol Chem 259:2856–2862
Munz P, Dorsch-Häsler K, Leupold U (1983) Curr Genet 7:101–108
Girgsdies O (1982) Curr Genet 6:223–228
Hottinger H, Leupold U (1981) Curr Genet 3:133–143
Barben H (1966) Genetica 37:109–148
Sumner-Smith M, Hottinger H, Willis I, Koch TL, Arentzen R, Söll D (1984) Mol Gen Genet 197:447–452
Gutz H, Schmidt H (1985) Curr Genet 9:325–332
Thuriaux P, Heyer WD, Strauss A (1982) Curr Genet 6:13–18
Nakaseko Y, Niwa O, Yanagida M (1983) J Bact 157:334–336
Meade JH, Gutz H (1978) Genetics 88:235–238
Schaack J, Mao J, Söll D (1982) Nucl Acid Res 10:2851–2864
Richter R, Heslot H (1982) Curr Genet 5:233–244
Hill JE, Fernandez S, Henry S (1986) Yeast 2:s156-s150
Durkacz B, Carr A, Nurse P (1986) EMBO J 5:369–373
Lang BF (1984) EMBO J 3:2129–2136
Lang BF, Ahne F, Distler S, Trinkl H, Kaudewitz F, Wolf, K. 1983. Berlin:Walter de Gruyter, Mitochondria.
Burger G, Wolf K (1981) Mol Gen Genet 181:134–139
Gross T, Nischt R, Käufer NF (1986) Mol Gen Genet 204:543–544
Ahne F, Merlos-Lange AM, Lang BF, Wolf K (1984) Curr Genet 8:517–524
Nurse P, Thuriaux P, Nasmyth KA (1976) Mol Gen Genet 146:167–178
Nurse P (1975) Nature 256:547–551
Maundrell K, Hutchinson A, Shall S (1986) Yeast 2:s233-s230
Gordon CB, Fantes PA (1986) EMBO J 5:2981–2986
Hirano T, Funahashi S, Uemura T, Yanagida M (1986) EMBO J 5:2973–2980
Gutz H, Heslot H, Leupold U, Loprieno, N. 1974. Plenum, Handbook of Genetics, vol. 1.
Young, PG, Fantes PA. 1984. Clifton:Humana, Growth, cancer and the cell cycle.
Goldman SL, Gutz H (1974). New York:Plenum, Mechanisms in recombination.
Fecke HC. (1985) PhD. Thesis, TU Braunschweig
Michael H. (1985) PhD. Thesis, TU Braunschweig
Leupold U. (1987) Unpublished
Munz, P. (1987) Unpublished
Amstutz H, Deiss V, Kohli J (1987) Unpublished
Hottinger H. (1980) PhD. Thesis, University of Bern
Yanagida M, Hiraoka Y, Uemura T, Miyake S, Hirano T. 1985. New York: Alan Liss, Yeast cell biology.
Lang B.F. (1987) Unpublished
Lieberman HB, Riley R, Martel M (1989) Mol Gen Genet 218:554–558
Oraler G, Olgun A, Karaer S (1990) Curr Genet 17:543–545
Hoffmann A, Horikoshi M, Wang CK, Schroeder S, Weil PA, Roeder RG (1990) Gene Dev 4:1141–1148
Maundrell K (1990) J Biol Chem 265:10857–10864
Kitamura K, Nakagawa T, Shimoda C (1990) Curr Genet 18:315–321
Small K, Brennwald P, Skinner H, Schaefer K, Wise JA (1989) Nucl Acid Res 17:9483–9480
Fukui Y, Miyake S, Satoh M, Yamamoto M (1989) Mol Cell Biol 9:5617–5622
Young D, Riggs M, Field J, Vojtek A, Broek D, Wigler M (1989) P N A S 86:7989–7993
Dandekar T, Tollervey D (1989) Gene 81:227–235
Ponticelli AS, Smith GR (1989) Genetics 123:45–54
Potashkin J, Frendewey D (1989) Nucl Acid Res 17:7821–7831
Langan TA, Gautier J, Lohka M, Hollingsworth R, Moreno S, Nurse P, Maller J, Sclafani RA (1989) Mol Cell Biol 9:3860–3868
Yamawaki-Kataoka Y, Tamaoki T, Choe HR, Tanaka H, Kataoka T (1989) P N A S 86:5693–5697
Fawell E, Hook S, Armstrong J (1989) Nucl Acid Res 17:4373–4370
Ohkura H, Kinoshita N, Miyatani S, Toda T, Yanagida M (1989) Cell 57:997–1007
Fukui Y, Yamamota M (1988) Mol Gen Genet 215:26–31
Adachi Y, Yanagida M (1989) J Cell Biol 108:1195–1207
Szankasi P, Heyer WD, Kotyk A (1988) J Mol Biol 204:917–925
Sipiczki M (1988) Mol Gen Genet 213:529–534
Nadin-Davis SA, Nasim A (1988) EMBO J 7:985–993
Rogers DT, Hiller E, Mitsock L, Orr E (1988) J Biol Chem 263:6051–6057
McKenzie R, Schuchert P, Kilbey B (1987) Curr Genet 12:591–597
Bach ML (1987) Curr Genet 12:527–534
Lund PM, Hasegawa Y, Kitamura K, Shimoda C, Fukui Y, Yamamoto M (1987) Mol Gen Genet 209:627–629
Uemura T, Morino K, Uzawa S, Shiozaki K, Yanagida M (1987) Nucl Acid Res 15:9727–9739
Takeda T, Yamamoto M (1987) P N A S 84:3580–3584
Hindley J, Phear G, Stein M, Beach D (1987) Mol Cell Biol 7:504–511
Nischt R, Gross T, Gatermann K, Swida U, Kaufer N (1987) Nucl Acid Res 15:1477–1492
Shimoda C, Uehira M, Kishida M, Fujioka H, Iino Y, Watanabe Y, Yamamoto M (1987) J Bact 169:93–96
Johnston LH, Barker DG, Nurse P (1986) Gene 41:321–325
Nadin-Davis SA, Yang RC, Narang SA, Nasim A (1986) J Mol Evol 23:41–51
Nischt R, Thuroff E, Kufer NF, (1986) Curr Genet 10:365–370
Beltrame M, Bianchi ME (1987) Nucl Acid Res 15:9089–9080
Mertins P, Gallwitz D (1987) Nucl Acid Res 15:7369–7379
Barker DG, White JH, Johnston LH (1987) Eur J Biochem 162:659–667
Uemura T, Morikawa K, Yanagida M (1986) EMBO J 5:2355–2361
Ares M. Jr. (1986) Cell 47:49–59
Hagan I, Hayles J, Nurse P (1988) J Cell Sci 91:587–595
Molz L, Booher R, Young P, Beach D (1989) Genetics 122:773–782
McLeod M, Stein M, Beach D (1987) EMBO J 6:729–736
Russell P, Nurse P (1987) Cell 49:559–567
Yamagishi M, Nomura M (1988) Gene 247:242–246
Gross T, Nischt R, Gatermann K, Swida U, Kaufer NF (1988) Curr Genet 13:57–63
Kikuchi Y, Kitazawa Y, Shimatake H, Yamamoto M (1988) Curr Genet 14:375–379
Kohli J (1987) Curr Genet 11:575–589
Booher R, Beach D (1989) Cell 57:1009–1016
Johnston LH, Barker DG (1987) Mol Gen Genet 207:161–164
Russell PR, Hall BD (1983) J Biol Chem 258:143–149
Ibrahim MAK, Coddington A (1978) Mol Gen Genet 162:213–219
Ibrahim MAK, Coddington A (1976) Heredity 37:179–191
Coddington A, Fluri R (1977) Mol Gen Genet 158:93–100
Berry HJ, Ibrahim MAK, Coddington A (1978) Mol Gen Genet 167:217–225
Yamamoto M (1980) Mol Gen Genet 180:231–234
Toda T, Umesono T, Hayashi S, Yanagida M (1983) J Mol Biol 168:251–270
Schweingruber ME, Wyssling H (1974) Biochim Biophys Acta 350:319–327
Nasmyth KA, Nurse P (1981) Mol Gen Genet 182:119–124
Nasmyth KA (1977) Cell 12:1109–1120
Russell PR, Hall BD (1982) Mol Cell Biol 2:106–116
Chevallier MR, Lacroute F (1982) EMBO J 1:375–377
Bresch L, Müller G, Egel R (1968) Mol Gen Genet 102:301–306
Egel R (1973) Mol Gen Genet 122:339–343
Strauss A (1379) Genet Res 33:261–268
Munz P (1975) Mutat Res 29:155–157
Tabata S (1981) Nucl Acid Res 9:6429–6438
Mao J, Appel B, Schaack J, Sharp S, Yamada H, Söll D (1982) Nucl Acid Res 10:487–500
Janner R, Vögeli G, Fluri R (1980) J Mol Biol 139:207–220
Thuriaux P, Sipiczki M, Fantes PA (1980) J Gen Micro 116:525–528
Bonatti S, Simili M, Abbondandolo A (1972) J Bact 109:484–491
Sakaguchi J, Yamamoto M (1982) P N A S 79:7819–7823
Losson R, Lacroute F (1983) Cell 32:371–377
Gamulin V, Mao J, Appel B, Sumner-Smith M, Yamao F, Söll D (1983) Nucl Acid Res 11:8537–8546
Bode R (1983) Z Allg Mikrobiol 23:219–224
Colson AM, Labaille F, Goffeau A (1976) Mol Gen Genet 149:101–109
Seitz-Mayr G, Wolf K, Kaudewitz F (1978) Mol Gen Genet 164:309–320
Del Guidice L, Wolf K, Seitz G, Burger G, Lang B, Kaudewitz F (1977) Mol Gen Genet 152:319–324
Massardo DR, Del Guidice L, Manna F, Wolf K (1982) Mol Gen Genet 187:96–100
Fawell E, Hook S, Sweet D, Armstrong J (1990) Nucleic Acids Res 18:4264
Miyake S, Yamamoto M (1990) EMBO J 9:1417–1422
Hengst L, Lehmeier T, Gallwitz D (1990) EMBO J 9:1949–1955
Reynolds P, Koken MHM, Hoeijmakers JHJ, Prakash S, Prakash L (1990) EMBO J 9:1423–1430
Uzawa S, Samejima I, Hirano T, Tanaka K, Yanagida M (1990) Cell 62:913–925
Xu H-P, Riggs M, Rodgers L, Wigler M (1990) Nucl Acid Res 18:5304
de Martin R, Philipson L (1990) Nucleic Acids Res 18:4917
Murray JM, Watts FZ (1990) Nucleic Acids Res 18:4590
Sunnerhagen P, Seaton BL, Nasim A, Subramani S (1990) Mol Cell Biol 10:3750–3760
Beltrame M, Bianchi ME (1990) Mol Cell Biol 10:2341–2348
Potashkin J, Frendewey D (1990) EMBO J 9:525–534
Haubruck H, Engelke U, Mertins P, Gallwitz D (1990) EMBO J 9:1957–1962
Iino Y, Sugimoto A, Yamamoto M (1991) EMBO J 10:221–226
Russell P, Nurse P (1987) Cell 49:569–576
Thuriaux P, Minet M, Hofer F, Leupold U (1975) Mol Gen Genet 142:251–261
Dhamija S, Fluri R, Schweingruber ME (1987) Curr Genet 11:467–473
Nakaseko Y, Adachi Y, Funahashi S, Niwa O, Yanagida M (1986) EMBO J 5:1011–1021
Yamagishi M, Nomura M (1988) Gene 74:503–515
Damagnez V, Tillit J, de Recondo AM, Baldacci G (1991) Mol Gen Genet 226:182–189
Damagnez V, de Recondo AM, Baldacci G (1991) Nucl Acid Res 19:1099–1104
Ottilie S, Chernoff J, Hannig G, Hoffman CS, Erikson RL (1991) P N A S 88:3455–3459
Olesen JT, Fikes JD, Guarente L (1991) Mol Cell Biol 11:611–619
Toda T, Shimanuki M, Yanagida M (1991) Gene Dev 5:60–73
Ohkura H, Yanagida M (1991) Cell 64:149–157
Hagan I, Yanagida M (1990) Nature 347:563–566
Azuma Y, Yamagishi M, Ueshima R, Ishihama A (1991) Nucl Acid Res 19:461–468
Feilotter H, Nurse P, Young PG (1991) Genetics 127:309–318
Choi IS, Kim JB, Hong SH, Park SD (1990) FEMS Micro Lett 61:97–100
Pidoux AL, Fawell EH, Armstrong J (1990) Nucl Acid Res 18:7145
Simanis V (1991) Unpublished
(1990) New Biol 2:929
Yanagida M (1990) Unpublished
Gaillardin C (1988) Unpublished
Gaterman KB, Teletski C, Gross T, Kaüfer NF (1989) Curr Genet 16:361–367
Barel I, Bignell G, Simpson A, MacDonald D (1988) Curr Genet 13:487–494
Falson P, Leterme S, Boutry M (1990) Unpublished
Kinoshita N, Ohkura H, Yanagida M (1990) Cell 63:405–415
Munz P, Wolf K, Kohli J, Leupold U (1989) Genetics Overview. In: Nasim A, Young P, Johnson BF (eds) Molecular Biology of the Fission Yeast. Academic Press, San Diego
Mathez B, Munz P (1989) Unpublished
Author information
Authors and Affiliations
Additional information
Communicated by A. Hinnen
Rights and permissions
About this article
Cite this article
Lennon, G.G., Lehrach, H. Gene database for the fission yeast Schizosaccharomyces pombe . Curr Genet 21, 1–11 (1992). https://doi.org/10.1007/BF00318646
Received:
Issue Date:
DOI: https://doi.org/10.1007/BF00318646