Collection
Microbiome dynamics in diseases
- Submission status
- Closed
The ‘human microbiome’ comprises the complex and diverse, microbial ecosystems that colonize different organs and tissues of the human bodies. The human microbiota consists of bacteria, archaea, viruses as well as eukaryotes (e.g. fungi and protozoa), which significantly impact the physiology, homeostasis and overall health of the human body. Since the microbiome is a complex and variable microbial community that responds to multiple factors, our current understanding of the microbiota dynamics and impact on disease development remains incomplete.
BMC Microbiology announces the launch of the collection “Microbiome dynamics in human diseases“. We invite submissions of manuscripts on research articles and methods addressing the complex role of the human microbiome, especially in the context of human diseases and biological dysfunctions. By acknowledging that ‘human microbiome research’ is rapidly evolving and fundamentally changing the way we study and treat human diseases, the overall goal of the collection is to enhance our knowledge on microbiome diversity and functions, microbiome-host interactions, and the role of microbiomes in health and disease.
Articles (36 in this collection)
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Correlation of gut microbial diversity to sight-threatening diabetic retinopathy
Authors (first, second and last of 5)
- Rehana Khan
- Abhishek Sharma
- Rajiv Raman
- Content type: Research
- Open Access
- Published: 13 September 2024
- Article: 342
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Vaginal microbiome differences between patients with adenomyosis with different menstrual cycles and healthy controls
Authors (first, second and last of 10)
- Zangyu Pan
- Jun Dai
- Guoyun Wang
- Content type: Research
- Open Access
- Published: 27 July 2024
- Article: 281
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Sustained gut dysbiosis and intestinal inflammation show correlation with weight gain in person with chronic HIV infection on antiretroviral therapy
Authors (first, second and last of 6)
- Aya Ishizaka
- Michiko Koga
- Hiroshi Yotsuyanagi
- Content type: Research
- Open Access
- Published: 24 July 2024
- Article: 274
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Adolescent gut microbiome imbalance and its association with immune response in inflammatory bowel diseases and obesity
Authors
- Minjae Joo
- Seungyoon Nam
- Content type: Research
- Open Access
- Published: 19 July 2024
- Article: 268
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Alterations of the bile microbiome is associated with progression-free survival in pancreatic ductal adenocarcinoma patients
Authors (first, second and last of 14)
- Hang Jiang
- Yitong Tian
- Yuhua Zhang
- Content type: Research
- Open Access
- Published: 01 July 2024
- Article: 235
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Taxonomic and phenotypic analysis of bifidobacteria isolated from IBD patients as potential probiotic strains
Authors (first, second and last of 13)
- Sabine Bosselaar
- Lucile Dhelin
- Céline Monnet
- Content type: Research
- Open Access
- Published: 29 June 2024
- Article: 233
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Prebiotic fibre mixtures counteract the manifestation of gut microbial dysbiosis induced by the chemotherapeutic 5-Fluorouracil (5-FU) in a validated in vitro model of the colon
Authors (first, second and last of 15)
- Janine Ziemons
- Lars E. Hillege
- Koen Venema
- Content type: Research
- Open Access
- Published: 26 June 2024
- Article: 222
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Genetic characteristics of chromosomally integrated carbapenemase gene (blaNDM−1) in isolates of Proteus mirabilis
Authors (first, second and last of 5)
- Qingyu Wang
- Kai Dong
- Qianyu Bian
- Content type: Research
- Open Access
- Published: 19 June 2024
- Article: 216
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Interactions between host and gut microbiota in gestational diabetes mellitus and their impacts on offspring
Authors
- Shuxian Wang
- Zifeng Cui
- Huixia Yang
- Content type: Review
- Open Access
- Published: 10 May 2024
- Article: 161
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Microbiome signatures associated with clinical stages of gastric Cancer: whole metagenome shotgun sequencing study
Authors (first, second and last of 17)
- Sohyun Jeong
- Yi-Tyng Liao
- Yi-Hsiang Hsu
- Content type: Research
- Open Access
- Published: 24 April 2024
- Article: 139
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The characteristics of microbiome in the upper respiratory tract of COVID-19 patients
Authors (first, second and last of 6)
- Xilong Zhang
- Nadira Nurxat
- Qian Liu
- Content type: Research
- Open Access
- Published: 24 April 2024
- Article: 138
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Exertional heat stroke-induced changes in gut microbiota cause cognitive impairment in mice
Authors (first, second and last of 7)
- Jiangang Xie
- Linxiao Wang
- Yang Huang
- Content type: Research
- Open Access
- Published: 23 April 2024
- Article: 134
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In silico analysis of intestinal microbial instability and symptomatic markers in mice during the acute phase of severe burns
Authors (first, second and last of 10)
- Bochen Hou
- Honglan Zhang
- Jun Hu
- Content type: Research
- Open Access
- Published: 15 April 2024
- Article: 124
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Relationship between heart failure and intestinal inflammation in infants with congenital heart disease
Authors (first, second and last of 6)
- Qi-Liang Zhang
- Xiu-Hua Chen
- Hua Cao
- Content type: Research
- Open Access
- Published: 25 March 2024
- Article: 98
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Clostridium butyricum inhibits the inflammation in children with primary nephrotic syndrome by regulating Th17/Tregs balance via gut-kidney axis
Authors (first, second and last of 13)
- Ting Li
- Xiaolong Ma
- Hao Wang
- Content type: Research
- Open Access
- Published: 23 March 2024
- Article: 97
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HPV-associated cervicovaginal microbiome and host metabolome characteristics
Authors (first, second and last of 14)
- Yao Zhang
- Xu Wu
- Qinglian Wen
- Content type: Research
- Open Access
- Published: 22 March 2024
- Article: 94
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Pretreatment with an antibiotics cocktail enhances the protective effect of probiotics by regulating SCFA metabolism and Th1/Th2/Th17 cell immune responses
Authors (first, second and last of 14)
- Jing Xu
- Haoming Xu
- Yuqiang Nie
- Content type: Research
- Open Access
- Published: 18 March 2024
- Article: 91
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Gut microbial network signatures of early colonizers in preterm neonates with extrauterine growth restriction
Authors (first, second and last of 7)
- Yumei Liang
- Xiaomin Yao
- Yanni Feng
- Content type: Research
- Open Access
- Published: 09 March 2024
- Article: 82
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Changes in the nasopharyngeal and oropharyngeal microbiota in pediatric obstructive sleep apnea before and after surgery: a prospective study
Authors (first, second and last of 4)
- Lucheng Fang
- Aikebaier Tuohuti
- Xiong Chen
- Content type: Research
- Open Access
- Published: 08 March 2024
- Article: 79
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The activation impact of lactobacillus-derived extracellular vesicles on lipopolysaccharide-induced microglial cell
Authors (first, second and last of 7)
- Yanfang Yang
- Na Li
- Xinli Ni
- Content type: Research
- Open Access
- Published: 28 February 2024
- Article: 70
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Rapid, visual, label-based biosensor platform for identification of hepatitis C virus in clinical applications
Authors (first, second and last of 12)
- Yuanfang Shi
- Qingxue Zhou
- Xu Chen
- Content type: Research
- Open Access
- Published: 28 February 2024
- Article: 68
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Chronic intestinal pseudo-obstruction: associations with gut microbiota and genes expression of intestinal serotonergic pathway
Authors (first, second and last of 15)
- Giulia Radocchia
- Massimiliano Marazzato
- Serena Schippa
- Content type: Research
- Open Access
- Published: 02 February 2024
- Article: 48
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Gut microbiota composition and changes in patients with sepsis: potential markers for predicting survival
Authors (first, second and last of 15)
- Feiyu Luan
- Yang Zhou
- Changsong Wang
- Content type: Research
- Open Access
- Published: 01 February 2024
- Article: 45
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Insights into estrogen impact in oral health & microbiome in COVID-19
Authors (first, second and last of 9)
- Rubén Alberto Bayardo-González
- Marcela Peña-Rodríguez
- Natali Vega-Magaña
- Content type: Research
- Open Access
- Published: 20 January 2024
- Article: 32
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Characteristics of gut microbiota in patients with asthenozoospermia: a Chinese pilot study
Authors (first, second and last of 4)
- Yang Pan
- Shangren Wang
- Xiaoqiang Liu
- Content type: Research
- Open Access
- Published: 15 January 2024
- Article: 22
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Bifidobacterium longum SX-1326 ameliorates gastrointestinal toxicity after irinotecan chemotherapy via modulating the P53 signaling pathway and brain-gut axis
Authors (first, second and last of 10)
- Fenfang Yue
- Xiangdi Zeng
- Tingtao Chen
- Content type: Research
- Open Access
- Published: 03 January 2024
- Article: 8
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Association of gut microbiota with the pathogenesis of SARS-CoV-2 Infection in people living with HIV
Authors (first, second and last of 9)
- Aya Ishizaka
- Michiko Koga
- Hiroshi Yotsuyanagi
- Content type: Research
- Open Access
- Published: 03 January 2024
- Article: 6
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Rapid intestinal and systemic metabolic reprogramming in an immunosuppressed environment
Authors (first, second and last of 17)
- Bing Ma
- Samuel J. Gavzy
- Jonathan S. Bromberg
- Content type: Research
- Open Access
- Published: 09 December 2023
- Article: 394
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Multi-omics analysis of fecal microbiota transplantation’s impact on functional constipation and comorbid depression and anxiety
Authors (first, second and last of 8)
- Chuanli Yang
- Tianjiao Hu
- Xiushan Dong
- Content type: Research
- Open Access
- Published: 07 December 2023
- Article: 389
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Multi-omics analyses of gut microbiota via 16S rRNA gene sequencing, LC-MS/MS and diffusion tension imaging reveal aberrant microbiota-gut-brain axis in very low or extremely low birth weight infants with white matter injury
Authors (first, second and last of 7)
- Ling Liu
- Min Xiang
- Dang Ao
- Content type: Research
- Open Access
- Published: 06 December 2023
- Article: 387
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Changes of gut microbiota and short chain fatty acids in patients with Peutz–Jeghers syndrome
Authors (first, second and last of 13)
- An Zhou
- Bo Tang
- Shiming Yang
- Content type: Research
- Open Access
- Published: 30 November 2023
- Article: 373
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Streptococcus strain D19T as a probiotic candidate to modulate oral health
Authors
- Wen Xiao Zhang
- Chun Ling Xiao
- Content type: Research
- Open Access
- Published: 16 November 2023
- Article: 339
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Alterations in gut microbiota and host transcriptome of patients with coronary artery disease
Authors (first, second and last of 10)
- Liuying Chen
- Xuanting Mou
- Yigang Zhong
- Content type: Research
- Open Access
- Published: 03 November 2023
- Article: 320
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Composition of pathogenic microorganism in chronic osteomyelitis based on metagenomic sequencing and its application value in etiological diagnosis
Authors (first, second and last of 6)
- Kang Zhang
- Yu-zhe Bai
- Run-gong Yang
- Content type: Research
- Open Access
- Published: 28 October 2023
- Article: 313
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Limited effects of azithromycin on the oropharyngeal microbiome in children with CF and early pseudomonas infection
Authors (first, second and last of 9)
- Brandie D. Wagner
- Edith T. Zemanick
- J. Kirk Harris
- Content type: Research
- Open Access
- Published: 27 October 2023
- Article: 312