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Phylogenetic analysis of the mammalian Hoxc8 non-coding region

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Genome Evolution

Abstract

The non-coding intergenic regions of Hox genes are remarkably conserved among mammals. To determine the usefulness of this sequence for phylogenetic comparisons, we sequenced an 800-bp fragment of the Hoxc9-Hoxc8 intergenic region from several species belonging to different mammalian clades. Results obtained from the phylogenetic analysis are congruent with currently accepted mammalian phylogeny. Additionally, we found a TC mini satellite repeat polymorphism unique to felines. This polymorphism may serve as a useful marker to differentiate between mammalian species or as a genetic marker in feline matings. This study demonstrates usefulness of a comparative approach employing non-coding regions of Hox gene complexes.

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Correspondence to Frank H. Ruddle .

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© 2003 Springer Science+Business Media Dordrecht

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Kim, CB., Shashikant, C.S., Sumiyama, K., Wang, W.C.H., Amemiya, C.T., Ruddle, F.H. (2003). Phylogenetic analysis of the mammalian Hoxc8 non-coding region. In: Meyer, A., Van de Peer, Y. (eds) Genome Evolution. Springer, Dordrecht. https://doi.org/10.1007/978-94-010-0263-9_19

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  • DOI: https://doi.org/10.1007/978-94-010-0263-9_19

  • Publisher Name: Springer, Dordrecht

  • Print ISBN: 978-94-010-3957-4

  • Online ISBN: 978-94-010-0263-9

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