Abstract
One of the main characteristics of diabetic kidney disease (DKD) is abnormal renal tubular fatty acid metabolism, especially defective fatty acid oxidation (FAO), accelerating tubular injury and tubulointerstitial fibrosis. Thiosulfate sulfurtransferase (TST), a mitochondrial enzyme essential for sulfur transfer, is reduced in metabolic diseases like diabetes and obesity. However, the potential role of TST in regulating fatty acid metabolic abnormalities in DKD remains unclear. Here, our data revealed decreased TST expression in the renal cortex of DKD patients. TST deficiency exacerbated tubular impairment in both diabetic and renal fibrosis mouse models, while sodium thiosulfate treatment or TST overexpression mitigated renal tubular injury with high-glucose exposure. TST downregulation mediated the decrease in S-sulfhydration of very long-chain specific acyl-CoA dehydrogenase, resulting in mitochondrial FAO dysfunction. This sequence of events exacerbates the progression of tubulointerstitial injury in DKD. Together, our findings demonstrate TST as a regulator of renal tubular injury in DKD.
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Introduction
Diabetic kidney disease (DKD) is a long-term microvascular complication of diabetes mellitus, characterized by glucose-induced renal injury in conjunction with inflammation [1], fibrosis [2], and compromised mitochondrial metabolic adaptability [3]. The progression of DKD is notably impacted by renal interstitial fibrosis, predominantly characterized by the abnormal expression of profibrotic factors [4], the activation of myofibroblasts [5], and the occurrence of epithelial-to-mesenchymal transition [6]. Under physiological conditions, renal tubular epithelial cells favor long-chain fatty acids as the primary energy substrate through mitochondrial fatty acid oxidation (FAO). A burgeoning body of evidence suggests that disrupted FAO contributes to renal fibrosis in the context of chronic kidney diseases [7,8,9], with the restoration of FAO, either genetically or pharmaceutically, potentially improving renal fibrosis [10,11,12].
The FAO pathway encompasses a range of oxidation processes, with mitochondrial β-oxidation serving as the principal mechanism for metabolizing long-chain fatty acids [13]. An acyl-CoA dehydrogenase facilitates the initial conversion of acyl-CoA into trans-2-enoyl-CoA in the mitochondrial β-oxidation pathway. Notably, the very long-chain acyl-CoA dehydrogenase (VLCAD) catalyzes the dehydrogenation of acyl-CoA, accommodating carbon chains from 12 to 24 units long. Some studies have shown that deficiency of the VLCAD caused disorders in mitochondrial FAO of long-chain fatty acids, potentially leading to complications such as hypoglycemia, rhabdomyolysis, cardiomyopathy, hepatic insufficiency, and even sudden death [14]. The enhanced catalytic efficiency of VLCAD, driven by an S-nitrosylation at Cys238, has been observed to regulate mitochondrial FAO in the liver of ob/ob mice [15]. In addition, VLCAD has been identified as a critical factor for mitochondrial metabolism in leukemia cells [16]. However, the effect of VLCAD on diabetic renal tubular injury remains to be elucidated.
Thiosulfate sulfurtransferase (TST), commonly known as rhodanese, is an abundantly expressed mitochondrial enzyme that plays a pivotal role in sulfur metabolism [17]. It was originally recognized for its involvement in cyanide detoxification, a process facilitated by TST through the use of sodium thiosulfate (STS) as a sulfur donor for cyanide sulfonation. Interestingly, a previous study revealed an inverse relationship between TST activity and the incidence of obesity and insulin resistance [18]. A recent study found an upregulated hepatic expression of carnitine palmitoyltransferase 1α in transgenic mice with adipocyte-specific overexpression of TST, implying an enhanced capacity for hepatic mitochondrial FAO. Carter et al. found medium-chain FAO was defective and mitochondrial respiration was increased in the hepatocytes of TST knockout (KO) mice [19].
S-sulfhydration, or persulfidation [20], a post-translational protein modification that involves the attachment of a hydropersulfide molecule to a cysteine residue of a target protein, has only recently come to light. Mass spectrometry data suggest that the livers of TST KO mice possess reduced levels of S-sulfhydrated proteins pivotal to lipid oxidation pathways [19]. Importantly, thiosulfate exposure reactivates the complex I subunit NADH dehydrogenase previously inhibited, when mediated by bovine rhodanese [21]. Nevertheless, it is still undetermined how TST affects renal function and S-sulfhydrated kidney proteins in DKD.
Therefore, this study aims to elucidate whether dysregulation of TST expression might modulate the S-sulfhydration of VLCAD, thereby potentially instigating mitochondrial FAO dysfunction in renal tubular epithelial cells and possibly exacerbating the progression of tubulointerstitial injury in DKD.
Results
TST expression was decreased in renal tubular epithelial cells of patients with DKD or in HK-2 cells exposed to high glucose
We examined TST expression in renal biopsy samples obtained from 16 individuals with DKD and 12 individuals who underwent nephrectomy without DKD but with renal cell carcinoma (Supplementary Tables 1 and 2). The immunohistochemical (IHC) analysis demonstrated that TST was predominantly expressed in renal tubular epithelial cells (Fig. 1a). Most notably, TST expression was markedly reduced in the renal tubules of patients with DKD. This diminution in TST levels was inversely correlated with the area of extracellular matrix deposition, as indicated by fibronectin staining (Fig. 1b, c). In addition, we further confirmed that TST expression significantly decreased in human kidney-2 (HK-2) cells treated with high glucose (HG) (Fig. 1d–g).
Diabetic TST knockout mice worsened renal fibrosis
The functional implications of TST in the progression of DKD were investigated through hyperglycemia induction via streptozocin (STZ) in wild-type (WT) mice [22] and systemic TST KO mice. The results showed the absence of TST expression in the renal tissue of TST KO mice that confirmed the successful establishment of TST deficiency (Fig. 2a, b). Both diabetic WT mice and TST KO mice demonstrated elevated fasting blood glucose levels compared to non-diabetic WT mice (Supplementary Table 3). Interestingly, the urine albumin/creatinine ratio (ACR) of diabetic TST KO mice significantly exceeded that of diabetic WT mice, suggesting an aggravation of renal impairment due to TST deficiency (Fig. 2c). The renal epithelial injury marker, urinary Kim-1, was markedly higher in the TST KO + DM group compared to the DM group alone (Fig. 2d). Additionally, renal hypertrophy was evident in diabetic mice, as indicated by the kidney weight to body weight ratio (Fig. 2e). Histological examination of renal tissue revealed advanced tubular damage in diabetic TST KO mice, including cell swelling and vacuolization (Fig. 2f). Despite the slight tubulointerstitial fibrosis in STZ-induced model, the expression of α-SMA and fibronectin highlighted a more significant fibrotic development in diabetic TST KO kidneys compared to diabetic WT kidneys (Fig. 2g, h and Supplementary Fig. 1a). Mitochondrial morphological changes in cortical proximal tubules were assessed using transmission electron microscopy (TEM). A pronounced disruption of mitochondrial structure was seen in diabetic TST KO mice, manifesting as swollen and fragmental (Fig. 2i).
The effects of TST on renal fibrosis were carried out using the unilateral ureteral obstruction nephropathy (UUO) kidney fibrosis model. Seven days post-surgery, TST KO mice presented with heightened tubular damage and interstitial fibrosis compared to WT mice, reinforcing the potential protective function of TST in renal tubulointerstitial fibrosis (Supplementary Fig. 2a–o). When comparing TST KO mice to WT controls, periodic acid-Schiff (PAS) staining showed that the degree of tubular atrophy and dilatation brought on by UUO was more severe (Supplementary Fig. 2a, b). Consistent with these findings, TEM images illustrated mitochondrial rupture and swelling in renal cortical proximal tubules post-UUO surgery (Supplementary Fig. 2p).
Overexpression of TST conferred protection against diabetic kidney fibrosis
To elucidate the role of TST in diabetic kidney damage, we conducted an experiment wherein mice were treated with adeno-associated virus 9 (AAV9)-TST to enhance TST expression and AAV9-Control to act as a baseline comparator. Notably, the TST protein expression in the renal tubular cells was significantly heightened in diabetic mice treated with AAV9-TST compared to those treated with AAV9-Control (Supplementary Fig. 3a, b). This increased expression was concomitant with observed improvements in renal tubular injury and renal fibrosis (Supplementary Fig. 3c–m). PAS staining showed that TST overexpression could significantly improve the atrophy and necrosis of renal tubular epithelial cells induced by diabetes (Supplementary Fig. 3f). Compared to the swollen and spherical mitochondria in diabetic mice, TST overexpression in renal epithelial cells corrected the majority of observed mitochondrial morphological alterations (Supplementary Fig. 3n).
Thiosulfate treatment protected kidneys from diabetic lesions via TST activation
TST has been identified as a rhodanese to cyanide detoxification, where the therapeutic antidote thiosulfate operates as a TST substrate facilitating the sulfane-sulfur transfer reaction [23]. Our study showed a notable augmentation in TST expression due to STS administration in the diabetic cohort (Fig. 3a, b). Furthermore, STS intervention reduced the severity of diabetic renal tubular injury throughout the 12-week experimental timeline (Fig. 3c–f). Additionally, PAS staining demonstrated that STS treatment ameliorated tubular injuries in diabetic mice, which were characterized by edema and tubular brush loss (Fig. 3f). Diabetic kidneys receiving STS exhibited markedly lessened expressions of renal fibrosis proteins (Fig. 3g, h and Supplementary Fig. 1b), alongside morphological modification of mitochondria as illustrated by TEM (Fig. 3i). Alanine transaminase and aspartate transaminase activities were lower in STS-treated diabetic mice, demonstrating STS’s biosafety (Fig. 3j). Cell viability was not adversely affected across varying STS concentrations (Fig. 3k, l).
TST overexpression ameliorated the injury of renal tubular epithelial cells caused by high glucose
Our further exploration into TST’s effects on renal tubular epithelial cells involved the upregulation of TST expression via TST plasmid transfection into HK-2 cells and primary tubular epithelial cells (PTEC), followed by HG exposure. TST overexpression resulted in reduced expression of profibrotic markers in HK-2 cells and PTEC subjected to HG conditions (Fig. 4a and Supplementary Fig. 4a). Despite a lack of substantial changes in mitochondrial membrane potential (MMP), reactive oxygen species (ROS) production was diminished and adenosine triphosphate (ATP) levels were amplified following TST overexpression in HK-2 cells (Fig. 4b–d). Overexpression of TST overrode the change of mitochondrial morphology, which was shown by improved mitochondrial aspect ratio and form factor in HG-induced HK-2 cells (Fig. 4e, f). To discern the metabolic pattern shift, we evaluated the oxygen consumption rate (OCR) of HK-2 cells and PTEC with TST overexpression in HG or normal glucose (NG) media. Results showed that HG exposure reduced ATP generation, maximal respiration, spare respiratory capacity, and basal respiration, whereas TST overexpression significantly enhanced these indices, indicating a successful resuscitation of mitochondrial respiration (Fig. 4g and Supplementary Fig. 4b). A decline in ATP generation, spare respiratory capacity and maximum respiration was evident in PTEC from TST KO mice when exposed to HG, compared to WT counterparts (Supplementary Fig. 4c).
STS treatment alleviated HG-induced tubular epithelial cell dysfunction and mitochondrial damage
Treatment with STS mitigated the high expression of renal profibrotic markers instigated by HG in renal tubular cell (Fig. 5a and Supplementary Fig. 4d). HG exposure caused a decrease in both ATP levels and MMP within renal tubular cells, a trend in which STS treatment effectively reversed (Fig. 5b, d). The administration of STS was further associated with a marked reduction in ROS production when compared to the HG group (Fig. 5c). Notably, the mitochondrial morphology was recovered, and the mitochondrial shape transitioned from short and round to elongated and flat in the STS-treated HG group, as opposed to the HG group (Fig. 5e, f). Findings from the OCR suggested that STS treatment facilitated an enhancement in renal tubule mitochondrial activity (Fig. 5g and Supplementary Fig. 4e).
TST maintained mitochondrial FAO homeostasis in renal tubular epithelial cells in diabetic conditions
The crucial role of metabolic alterations in renal tubular cells in DKD is well-documented [24]. TST shows to be a significant player in metabolic disease [17]. Consequently, we employed targeted metabolomics of the renal cortex to elucidate the metabolic pathways influenced by TST deficiency. Pronounced metabolic differences among the four groups of mice were observed (Supplementary Fig. 5a). The apparent differential metabolites were mainly clustered in acylcarnitines, nucleic acid metabolites, and organic acids (Fig. 6a). Both DKD and chronic kidney disease share a characteristic accumulation of long-chain acylcarnitines in renal tissues, indicative of an aberration in mitochondrial fatty acid β-oxidation [25, 26]. Notably, our study showed that the kidneys of diabetic TST KO mice compared to diabetic WT mice displayed heightened levels of long-chain acylcarnitines (Fig. 6b), whereas a decrease in long-chain acylcarnitines was detected in the diabetic group treated with STS relative to diabetic control mice (Fig. 6c). These findings point toward a potential link between mitochondrial fatty acid β-oxidation dysregulation and TST expression. Changes in medium-chain and short-chain acylcarnitines in the renal cortex were not consistent and evident in diabetic TST KO mice or diabetic animals treated with STS as compared to normal diabetic mice (Supplementary Fig. 5b–e). To further investigate the role of TST in FAO, we overexpressed TST with a TST plasmid in PTEC prior to HG stimulation in vitro. Our observations showed that TST upregulation significantly enhanced FAO activity, manifested by notable shifts in maximal respiration in the presence or absence of the carnitine palmitoyltransferase 1 inhibitor, etomoxir (Eto), relative to the HG group (Fig. 6d, e). STS treatment increased the FAO capacity of renal tubules, thereby effectively ameliorating the metabolic dysregulation induced by HG levels (Fig. 6f and Supplementary Fig. 5f). We performed stable isotope tracing tests using a uniformly labeled 13C16 palmitate tracer in PTEC to further explore the impact of TST on long-chain FAO. In PTEC exposed to HG levels, we observed significant reductions in medium and short-chain acylcarnitines generated from the 13C16 palmitate, further indicating long-chain FAO inhibition (Supplementary Fig. 5g, h). The end product of the FAO pathway, 13C2 acetyl-carnitine, increased in HG-treated PTEC upon treatment with TST overexpression or STS, indicating an improvement in long-chain FAO dysfunction (Fig. 6g, h).
TST promoted S-sulfhydration of VLCAD
TST deficiency has been associated with low hepatic protein persulfidation, which includes a reduction in the S-sulfhydration of the acyl-CoA dehydrogenase family [19]. In this context, we examined the influence of TST on VLCAD S-sulfhydration, particularly with respect to alterations in the metabolism of long-chain fatty acids. The biotin–thiol labeling assay revealed that diabetic TST KO exhibited decreasing renal DTT-sensitive S-sulfhydration of VLCAD (Fig. 7a). The same pattern was evident in the kidneys of UUO model mice, underscoring the global role of TST in modulating VLCAD S-sulfhydration (Supplementary Fig. 2q). Conversely, overexpression of TST increased S-sulfhydrated VLCAD in the renal cortex of diabetic mice (Supplementary Fig. 3o). Comparable results were documented in HK-2 cells transfected with pl-TST and challenged by HG levels in vitro (Fig. 7b). When treated with STS, there was a pronounced increase in S-sulfhydrated VLCAD in both diabetic mice and HG-induced cells (Fig. 7c, d).
VLCAD features four evolutionarily conserved cysteine residues located within the catalytic region (Supplementary Table 8). To ascertain the cysteine target, we generated a sequence of mutants by substituting Cys215, Cys237, Cys433, and Cys477 with serine. Following transfection into HEK-293T cells, the S-sulfhydration level of the Cys237S mutant was found to be significantly less than that of the WT VLCAD and the other serine-substituted mutants (Fig. 7e). Similarly, in HK-2 cells, downregulation of VLCAD S-sulfhydration brought on by HG may be improved by overexpressing VLCAD but not C237S mutant (Fig. 7f).
VLCAD Cys237 is crucial to sustain mitochondrial FAO homeostasis in renal tubular epithelial cells under diabetic and high-glucose conditions
To elucidate the role of S-sulfhydrated VLCAD, we conducted transfection experiments with WT VLCAD, mutant Cys237S, and a blank control plasmid. Our findings indicate that VLCAD upregulation caused a decrease in ROS production and an enhancement of MMP in HK-2 cells under HG conditions, thereby demonstrating its protective effects on renal tubular mitochondria from HG-induced stress. In contrast, the Cys237S mutant was associated with amplified ROS production, diminished MMP, and reduced ATP levels when compared to the WT VLCAD under HG conditions (Supplementary Fig. 6a–c). Results from the OCR study revealed that, in contrast to the Cys237S mutant, VLCAD overexpression facilitated an improvement in renal tubule mitochondrial activity (Supplementary Fig. 6d). Further, our assessment of FAO activity, gauged through the variance in maximal respiration levels with and without Eto, revealed that PTEC overexpressing the mutant Cys237S displayed a significant reduction in FAO activity when compared to those overexpressing WT VLCAD (Supplementary Fig. 6e). This underscored the pivotal role of VLCAD Cys237 in the preservation of mitochondrial FAO homeostasis. Our findings indicate that VLCAD overexpression effectively ameliorated HG-induced fibrotic state in HK-2 cells, whereas the Cys237S mutant did not exhibit these effects (Fig. 7g). This also suggests that the modulation of mitochondrial FAO through S-sulfhydration of VLCAD is instrumental in mitigating HG-induced renal tubular dysfunction.
Discussion
The disruption in renal tubular lipid metabolism, particularly lipid accumulation [26] and FAO dysregulation, is one of the main characteristics of DKD. Fibrotic kidneys exhibit an accumulation of carnitine-conjugated long-chain fatty acids, indicative of deficiencies in mitochondrial fatty acid metabolism [25]. Studies conducted on diabetic patients have revealed elevated levels of plasma/serum acylcarnitines in DKD patients compared to diabetic counterparts without kidney disease [27], and these findings predicted DKD progression [28]. Sprague-Dawley rats with STZ-induced diabetes showed accumulation of acylcarnitine species in the combined renal cortex and the outer strip of the outer medulla within 2 weeks post-diabetes onset, signifying FAO dysregulation even at such an early stage [29]. Comparatively, db/db mice demonstrated accumulated long-chain acylcarnitines (C14 and C16) in the renal cortex at ages 12 and 24 weeks [27]. We found significant accumulation of long-chain acylcarnitine in the renal cortex of diabetic mice, suggesting that long-chain acylcarnitine accumulation may be a phenotype of early diabetic kidney injury. In addition, it was reported that hepatocyte respiration induced by octanoate was significantly reduced in TST KO mice compared to normal hepatocytes, suggesting impairment of medium-chain FAO due to TST KO [19]. In diabetic TST KO mice, we observed an intensified FAO disorder, as evidenced by increased accumulation of long-chain acylcarnitines. Taken together with in vitro results, we conclude that TST could regulate FAO to exert reno-protective effects.
STS has traditionally been employed in treating diseases such as cyanide poisoning [23], cisplatin-induced hearing loss [30], and calciphylaxis [31]. STS has also demonstrated protective effects in metabolic disorders. In experiments with db/db diabetic mice, STS administration effectively mitigated high fat diet-induced glucose intolerance and accompanying conditions such as polydipsia, polyuria, insulin resistance, and elevated levels of glycosylated hemoglobin [18]. Further, our findings indicate that STS could ameliorate FAO dysfunction in renal tubular epithelial cells, as suggested by reduced levels of renal long-chain acylcarnitine. Marutani et al. have shown [32], using the human neuroblastoma cell line SH-SY5Y, that STS can decrease caspase-3 activity via increasing the S-sulfhydration of Cys163. We provide evidence that STS may potentially attenuate interstitial fibrosis in DKD by augmenting TST expression and enhancing S-sulfhydration of VLCAD in tubular cells.
During the process of S-sulfhydration, cysteine thiol groups (–SH) are converted to persulfide groups (–SSH), a post-translational modification that alters the activity of the modified protein, contingent on the acid dissociation constants of cysteine residues [33]. It is known that aging induces changes in the renal sulfhydrome, with most S-sulfhydrated proteins implicated in metabolic pathways. Notably, these proteins are typically localized within the mitochondrial matrix and the organelle lumen [34]. Furthermore, Sirtuin 3 has been shown to be S-sulfhydrated to enhance mitochondrial function and minimize oxidative damage in cisplatin-induced acute renal injury [35]. Polysulfide-mediated sulfhydration of Sirtuin1 has been shown to protect against diabetic nephropathy [36]. We posit that, for the first time, enhanced S-sulfhydration of VLCAD could potentially modify FAO dysfunction in renal tubular epithelial cells, serving as a proactive strategy against diabetic renal fibrosis.
VLCAD, a homodimer that resides within the inner mitochondrial membrane, is composed of subunits of 67 kDa each. Specific point mutations in the human variant of VLCAD are linked to a congenital metabolic disorder, which can manifest with severe pathophysiologic consequences such as cardiomyopathy, hypoglycemia, and rhabdomyolysis [37]. Our research revealed that VLCAD plays a crucial role in maintaining the health of renal tubular epithelial cells and their mitochondria. We also established that S-sulfhydration of Cys237 in human VLCAD markedly ameliorated FAO dysfunction, protecting renal tubular cells from HG.
There are some limitations in this study. We conducted in vivo experiments by using TST global KO mice and AAV9-mediated TST overexpression model. In comparison, renal tubule-specific TST overexpression could be a superior strategy. Another limitation is that we were unable to conduct the persulfidomic profiles of diabetic kidneys due to the restrictions of experimental technologies. Persulfidomic profiles could provide a more comprehensive picture of S-sulfhydrated proteins controlled by TST in renal tubular epithelial cells [38].
In summary, we have, for the first time, delineated the role of TST in mitigating diabetic renal tubular injury. Our findings illustrate that a decline in TST expression in renal tubular epithelial cells is associated with a decrease in S-sulfhydration of VLCAD, subsequently leading to mitochondrial FAO dysfunction and the exacerbation of tubulointerstitial injury in DKD. Our experiments also suggest that the administration of STS has potential therapeutic value in countering the progressive effects of DKD. These findings add to our understanding of TST’s biological functions within the kidney and suggest that it plays a critical role in the onset and progression of tubulointerstitial fibrosis in DKD.
Materials and methods
Experimental animals
All in vivo procedures were carried out in accordance with protocols approved by the Animal Care and Use Committee of Southeast University, Nanjing, China (Approval No. 20210227025). Mice (3–5 mice/cage) housed in a standard, pathogen-free environment operating on a 12-h light/12-h dark cycle. All mice were provided with a standard chow diet (comprising 20.6% proteins, 12% fats, and 67.4% carbohydrates) from Jiangsu Synergetic Pharmaceutical Bioengineering Co., Ltd. Eight-week-old mice weighing 20–22 g were used in this study. Random allocation of groups was conducted using a computer-based random order generator. The investigators performed outcome evaluations while being blinded to the group allocations. Exclusion criteria were established based on the well-being of the animals at the beginning of the study. The sample size was determined based on the experience gained from previous studies involving diabetic animals and KO mice in the laboratory. Littermate control mice were used for all in vivo experiments, and the number of mice used for each experiment is specified in the figure legends. The mice were sacrificed at the end of the experiment by inhaling isoflurane, and tissues were collected for further examination.
We used male C57BL/6J TST KO and WT mice, procured from GemPharmatech Co., Ltd. (C57BL/6JGpt-Tstem1Cd1782/Gpt, Strain No. T044159). We employed the CRISPR/Cas9 technique to delete a 299 bp sequence in exon 2 of the TST gene. Gene targeting verification was achieved by executing PCR on tail DNA. The mouse genotype did not cause visible changes in initial weight, health, or immune status.
For the diabetic mouse model, we administered an intraperitoneal injection of streptozotocin (STZ, Sigma-Aldrich) in 50 mmol/l sodium citrate buffer at 50 mg/kg for 5 consecutive days to 8-week-old fasted male mice, whereas the non-diabetic cohorts were injected with an equal volume of citrate buffer. Approximately 2 weeks post-STZ injection, we considered diabetic groups with blood glucose levels exceeding 16.7 mmol/l as diabetic and incorporated them into the study. Only male mice were used to make the diabetic mouse model in this study as male mice develop more severe diabetic kidney injury. Upon successful diabetes induction, the mice received daily oral administration of 100 μl phosphate-buffered saline (PBS) or STS (0.4 g/kg body weight). The adeno-associated viruses (AAV9) were procured from GeneChem Company, Shanghai, China. Mice were randomized to administered with either 100 μl AAV9-TST or AAV9-Control, each at a concentration of 1 × 1011 VG/ml through the tail vein. We established the diabetic model 2 weeks post-AAV injection, and subsequently the diabetic mouse models were harvested for analysis 12 weeks post-STZ injection.
For the fibrosis model, we randomly allocated 8-week-old male mice to undergo either sham surgery or UUO. The UUO group of mice after anesthetized had their left side of the abdomen shaved, followed by a vertical scalpel incision and skin retraction. To show the kidney, a second incision was performed into the peritoneum. Using 4-0 surgical silk, the left ureter was twice tied off 15 mm below the renal pelvis. The ureter was then severed in the space created by the two ligatures. After that, the ligated kidney was carefully moved back into its proper anatomical position, and fluid loss was restored with sterile saline. In a similar fashion, but without ureteral ligation, the sham operation was carried out. We collected left kidneys for analysis 7 days post-operation.
Blood and urine biochemical analysis
Biochemical analyses of serum parameters, including creatinine (SCr), blood urea nitrogen, glucose, total cholesterol, triacylglycerol, high-density lipoprotein cholesterol, and low-density lipoprotein cholesterol levels, were conducted using an automatic biochemistry analyzer (Biobase, China). To assess the biosafety of STS, serum levels of alanine aminotransferase (ALT) and aspartate aminotransferase (AST) were also measured utilizing the same analyzer. For urine biochemical analysis, mice were fasted and individually placed in metabolic cages for urine collection over a period of 6 h. Urinary albumin and creatinine levels in mice were evaluated employing mouse microalbuminuria enzyme-linked immunosorbent assay (ELISA) kit (Elabscience, China) and creatinine (urinary) colorimetric assay kit (Jiancheng, China), respectively, in adherence to the manufacturer’s protocols. Urinary levels of Kim-1 were quantified using an ELISA kit (Elabscience, China).
Human sample collection
This research project was conducted according to the Declaration of Helsinki and good clinical practice. The study received approval from the Biomedical Ethics Committee of Zhong Da Hospital, Southeast University (Approval Number: 2019ZDSYLL057-P01), and informed consent was obtained from all participants. All methods were carried out in accordance with relevant guidelines and regulations.
Human tissue samples were collected from patients diagnosed with DKD at the Zhong Da Hospital, Southeast University, with verification via renal biopsy. For comparison, healthy kidney tissues were obtained from nephrectomy patients diagnosed with renal cell carcinoma. Detailed clinical characteristics of these patients are presented in Supplementary Tables 1 and 2.
Immunohistochemical staining
Paraffin-embedded kidney tissue sections, with a thickness of 3 μm, were prepared for IHC staining of α-SMA, E-cadherin, fibronectin, and TST. After dewaxing, heat-induced epitope retrieval was conducted on the kidney sections, which were then blocked using an endogenous peroxidase-blocking solution. Subsequently, primary antibodies (details in Supplementary Table 6) were applied and left to incubate overnight at 4 °C. After three washes with PBS, sections were treated with super horseradish peroxidase (HRP) Mouse/Rabbit IHC Kit (MXB Biotechnologies, China), as per the manufacturer’s instructions. Peroxidase conjugates were visualized using a Diaminobenzidine (DAB) kit (MXB Biotechnologies, China) and counterstained with hematoxylin. Photomicrographs were captured using an Olympus optical microscope, with analysis conducted using Image J software.
Western blot analysis
Tissue and cell samples were lysed using Radio-Immunoprecipitation Assay lysis buffer (Keygen Biotech, China), supplemented with phosphatase inhibitors (Keygen Biotech, China). Protein concentrations were quantified utilizing a bicinchoninic acid (BCA) protein assay kit (Keygen Biotech, China). Equal concentrations of proteins were then loaded onto sodium dodecyl sulfate-polyacrylamide gels for electrophoresis and subsequently transferred onto an immobilon-P polyvinylidene difluoride (PVDF) membrane (Merk Millipore, USA). Following the blocking with 5% bovine serum albumin (BSA), membranes were incubated overnight at 4 °C with primary antibodies, followed by incubation with HRP-conjugated secondary antibodies for an hour (details in Supplementary Table 6). Protein band intensities were quantified using Image J software. β-actin was used as an internal control and the levels of protein expression normalized to the control group.
Quantitative real-time polymerase chain reaction (qRT-PCR) analysis
Total RNA was isolated from cell samples utilizing the total RNA extraction reagent (Vazyme, China) and subsequently reverse transcribed into cDNA with the aid of the reverse transcription SuperMix (Vazyme, China). The quantification of mRNA was carried out employing the SYBR qPCR Master Mix (Vazyme, China) and detected via the 7300 Real-Time PCR Detection System (Applied Biosystems, USA). β-actin served as the internal reference. The 2−ΔΔCT method was utilized for the quantification of relative gene expression levels. The utilized gene primers are detailed in Supplementary Table 7.
Periodic acid-Schiff (PAS) staining and Masson’s trichrome staining
Paraffin-embedded sections of kidney tissue underwent PAS and Masson’s trichrome staining to assess renal tubular injury and tubulointerstitial fibrosis, respectively. To determine interstitial fibrosis, a minimum of five images of the kidney cortex (at 400× magnification), stained with Masson’s trichrome, were randomly selected from each mouse. The presence of blue staining indicated tissue fibrosis. The subsequent quantification of the fibrotic area was executed utilizing Image J software. The tubular injury score was determined by evaluating the severity of tubular dilatation, atrophy, and cell loss as previously reported [39]. Twenty PAS-stained kidney cortex images (at 400× magnification) were randomly chosen for per mouse, and the images were evaluated as follows: 0 for no injury, 1 for <25%, 2 for 25%–50%, 3 for 50%–75%, and 4 for >75% tubular injury.
Cell culture
The HK-2 tubular epithelial cell line and HEK-293T cell line were obtained from the American Type Cell Culture (ATCC). STR profiling was used to identify each cell line, and no mycoplasma contamination was found.
HK-2 cells were propagated in Dulbecco’s Modified Eagle Medium/Nutrient Mixture F-12 (DMEM/F-12) medium (Wisent Corporation, China), supplemented with 10% fetal bovine serum (FBS) and 1% penicillin/streptomycin, under atmospheric conditions of 95% air and 5% CO2. Subsequent to a 6-h nutrient deprivation phase in DMEM/F-12 medium containing 1% penicillin/streptomycin, the HK-2 cells were exposed to distinct treatments, as specified in figure legends. The study employed a plasmid (Sangon Biotech, China) to induce protein overexpression, thus exploring the mechanism underlying tubulointerstitial injury. Lipofectamine TM 2000 reagent (Invitrogen, USA) was utilized according to the manufacturer’s instructions.
HEK-293T cells were cultured in DMEM-HG medium (Wisent Corporation, China), fortified with 10% FBS and 1% penicillin/streptomycin, within an atmosphere comprising 95% air and 5% CO2. The HEK-293T cells, post a 6-h fasting period in DMEM-HG media with 1% penicillin/streptomycin, were transfected using a combination of Lipofectamine TM 2000 reagent and various plasmids. The culture medium was replenished following a 6-h transfection period. The plasmid pcDNA3.1-VLCAD and its mutation was purchased from (Sangon Biotech, China). Successful single-site mutation of Cys215, Cys237, Cys433, or Cys477 to serine was confirmed by DNA sequencing.
PTEC were procured from the renal cortex of 3-week-old mice. The isolated cortical tissue was transferred to a Hank’s balanced salt solution, meticulously dissected into roughly 1 mm3 fragments, and passed through a series of 70 μm mesh screens. The tissue fragments were subjected to enzymatic digestion with 1 mg/ml type I collagenase (Biosharp, China) at 37 °C for a duration of 25 min. The resulting cell suspension, obtained after passage through a 40 μm mesh, was propagated in DMEM/F-12 medium supplemented with 10% FBS, 1% penicillin/streptomycin, 1% insulin–transferrin–selenium (Gibco), 10 ng/ml epidermal growth factor (Novoprotein, China), and 50 nmol/l hydrocortisone (Selleck). After 48 h of PTEC culture, the medium was replaced. The PTEC were mainly used before the F2 generation. AQP-1 fluorescence was used to determine the purity of the PTEC. Over 80% of all cells express AQP-1 fluorescence, making them usable.
Cell viability and cytotoxicity assessment
The biosafety of STS was evaluated through cell viability and cytotoxicity tests. This was conducted using a cell counting kit-8 (CCK8, Beyotime, China) and a lactate dehydrogenase (LDH) cytotoxicity colorimetric assay (Elabscience, China). The HK-2 cells underwent these tests subsequent to treatment with STS.
Seahorse metabolic assay
An examination of mitochondrial respiration and mitochondrial FAO functionality in cultured cells was conducted utilizing a Seahorse flux analyzer (Agilent Technologies), in adherence to the manufacturer’s guidelines. In summary, XF96 cell culture microplates were utilized to culture 2 × 104 cells/well in Agilent Technologies’ growth medium. Before the assay, the cells received a thorough rinse with assay medium. For the FAO assay, Eto (4 μmol/l, Selleck) was applied to select wells. The culture then sequentially received oligomycin (1 μmol/l), FCCP (1 μmol/l), and rotenone/antimycin A (0.5 μmol/l). This allowed the assessment of the OCR. As previously described, the assessment of mitochondrial FAO was achieved through the calculation of the difference in maximal respiration levels between cells that underwent treatment with Eto (denoted as “+Eto”) and those that did not [11].
Detection of reactive oxygen species (ROS) and mitochondrial membrane potential
Cells, post-digestion, were incubated with either mitosox (4 μmol/l, Invitrogen) or tetramethylrhodamine ethyl ester (1×, Beyotime, China). This process took place in a cell incubator that maintained a 5% CO2 and 95% air atmosphere at 37 °C away from light, for a duration of 20 min. Following this, cells were rinsed and an equal concentration of cell suspension was placed into a light-proof, black 96-well plate with a transparent bottom. The fluorescence intensity was then gauged using a Varioskan LUX Multimode Microplate Reader (Thermo Scientific).
Adenosine triphosphate (ATP) measurement
The ATP concentration present in the kidneys and cells was ascertained through the ATP colorimetric assay kit (Beyotime, China). Following this, samples were mixed with the ATP probe, converter, and developer. The relative light unit value was determined via chemiluminescence. Finally, the ATP concentration in each sample was calculated in accordance with the luminescence signal and normalized by the protein concentration.
Transmission electron microscopy
Sample tissues and cells were fixed using 2.5% glutaraldehyde at a temperature of 4 °C. The procedure for preparing and analyzing TEM samples was conducted by Wuhan Pinuofei Biological Technology Co., Ltd. Six fields with at least five mitochondria each were randomly selected from TEM images of the renal tubular cells in vivo or HK-2 cells in vitro. The software utilized for analyzing TEM images was Image J. The aspect ratio was determined as the ratio of the major to minor mitochondrial axes. The form factor was defined as the square of the perimeter divided by the product of 4π and the surface area. The aspect ratio reflects the shape of the mitochondria and the form factor reflects the branching and morphological complexity of mitochondria [40].
S-sulfhydration biotin–thiol labeling assay
S-sulfhydration biotin–thiol labeling assay was performed as previously described [41]. Cells or kidney tissue samples were homogenized using HEN buffer comprising 250 mmol/l HEPES–NaOH (pH 7.7), 1 mmol/l EDTA, 0.1 mmol/l neocuproine, and supplemented with 150 μmol/l deferoxamine, 1% Nonidet-P4, and a cocktail of protease/phosphatase inhibitors. The obtained lysates were combined with HEN buffer fortified with 2.5% SDS and 20 mmol/l methyl methanethiosulfonate (MMTS, Sigma-Aldrich), serving to block free thiols. Excess MMTS was eliminated via pre-cooled acetone. Post-centrifugation, the pellets were resuspended in HEN buffer, which included 1% SDS and 4 mmol/l biotin-HPDP (Sangon Biotech, China). Following a 3-h incubation period at 25 °C, proteins were extracted using acetone. Ultimately, the proteins were dissolved in a solution buffer and purified with streptavidin resin (Sangon Biotech, China). Detection of S-sulfhydrated proteins was performed through SDS–PAGE and western blotting. Each test incorporated a negative control, generated by the inclusion of 1 mmol/l dithiothreitol (DTT) during the biotin cross-linking phase.
Targeted metabolomics analysis
Renal cortex tissues were subjected to targeted metabolomics examination, which was performed by BIOPROFILES (Shanghai, China). BIOPROFILES employed a standardized procedure to prepare the renal samples for analysis by liquid chromatography–tandem mass spectrometry [42]. Statistical analysis was applied to identify metabolites demonstrating differential levels, predicated on p values <0.05 and Variable Importance for the Projection (VIP) score exceeding 1.
Acylcarnitine LC–MS/MS profiling
The acylcarnitine profiling was conducted by BIOMS (Beijing, China), utilizing an Acquity ultra-performance liquid chromatography system in combination with a XEVO TQ XS mass spectrometer supplied by Waters Corporation (MA, USA). Data procured from the mass spectrometry were processed employing Target Lynx software from Waters Corporation.
Stable isotope tracing experiment
PTECs after treatment incubated with 50 μmol/l uniformly labeled 13C16 palmitate (MedChemExpress) and 100 μmol/l l-carnitine (Selleck) for 12 h. Cells were then collected, counted, washed three times in PBS, and frozen at −80 °C until ultra-performance liquid chromatography analysis. Analysis of acylcarnitines was carried out at LipidALL Technologies as previously described [43].
Statistical analysis
All experimental data represent a minimum of three independent experiments and are expressed as the mean ± standard error of the mean (SEM) using GraphPad Prism 8. Sample sizes are stated in the figure legends and no data were omitted. Statistical significance between the two groups was determined using a two-tailed Student’s t-test for normally distributed data. For comparisons involving more than two groups, one-way analysis of variance (one-way ANOVA) was used followed by Tukey’s multiple comparisons test for normally distributed datasets and Kruskal–Wallis was used followed by Dunn’s multiple comparisons test for nonnormally distributed datasets.
Data availability
We verify that the authors have provided all pertinent data. We have also submitted complete and uncut western blots as Supplementary Material.
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Funding
This study was supported by the National Natural Science Foundation of China (82170736, 81970629, 82370716), and the Natural Science Foundation of Zhejiang Province (LHDMY23H070002).
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KLM and JXZ performed the study concept and design; PPC, JXZ, and XQL performed the experiments. The data were analyzed by LL, GHW, QYW; JXZ, KLM, and XZR drafted and revised the manuscript. KLM and XZR have verified the underlying data. All authors had access to the data, reviewed the manuscript, and approved the final version for submission.
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Animal studies were approved by the Animal Care and Use Committee of Southeast University (Approval No. 20210227025). All human studies were performed with informed patient consent and were approved from the Biomedical Ethics Committee of Zhong Da Hospital, Southeast University (Approval Number: 2019ZDSYLL057-P01). All methods were carried out in accordance with relevant guidelines and regulations.
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Zhang, J.X., Chen, P.P., Li, X.Q. et al. Deficiency of thiosulfate sulfurtransferase mediates the dysfunction of renal tubular mitochondrial fatty acid oxidation in diabetic kidney disease. Cell Death Differ (2024). https://doi.org/10.1038/s41418-024-01365-8
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DOI: https://doi.org/10.1038/s41418-024-01365-8
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