Opinion statement
Treatment of pulmonary infections caused by Mycobacterium avium complex (MAC) and Mycobacterium kansasii involves multidrug oral therapy with a macrolide (azithromycin or clarithromycin), ethambutol, and a rifamycin (rifampin or rifabutin). Patients with M. kansasii rapidly respond to a regimen of intermittent (three times weekly) or daily administration of this three-drug regimen. Patients with MAC respond more slowly and often require adjustment of the multidrug regimen because of drug intolerance. The usual treatment for patients with MAC nodular disease takes 15–18 months, with a goal of 12 months of negative cultures. Recent studies support the use of a three-times weekly oral treatment regimen for patients with macrolide-susceptible nodular MAC disease. Patients with upper lobe fibro-cavitary MAC, macrolide-resistant MAC, or severe nodular bronchiectatic disease are usually treated with a daily multidrug regimen supplemented with an injectable antibiotic (amikacin or streptomycin) or, most recently, inhaled preparations of amikacin. Patients with cavitary changes and/or those with macrolide-resistant isolates are often associated with poor treatment response and may require surgical resection in addition to their drug therapy. In contrast to patients with lung disease due to MAC and M. kansasii, the presence of a functional erythromycin ribosomal methylase (erm) gene in the majority of isolates of Mycobacterium abscessus (M. abscessus subsp. abscessus) blocks the activity of macrolides and precludes an effective oral drug regimen for most of these patients. Treatment regimens for macrolide-resistant M. abscessus require long-term intravenous access and parenteral drug combinations of amikacin, cefoxitin, imipenem, and/or tigecycline. Because of the inconvenience of dosing cefoxitin, a regimen of imipenem and amikacin may be preferred. Cure with these agents is infrequent because of the long-term toxicity and expense of these agents. Other treatment options are currently dismal. The role of newer antimicrobials such as tedizolid and bedaquiline has not been evaluated. Approximately 15 % of isolates of subsp. abscessus and all isolates of subsp. massiliense (infrequent in the USA) have a nonfunctional erm gene and are macrolide susceptible, making an oral macrolide an important treatment component and increasing the likelihood of long-term cure of the infection.
Similar content being viewed by others
Avoid common mistakes on your manuscript.
Introduction
Species identification
Since the description of the first nontuberculous mycobacteria in the late 1800s, the recognition of nontuberculous mycobacteria (NTM) species has dramatically increased to more than 150 species and subspecies, currently largely due to the advent of molecular technology and the increase in susceptible hosts. NTM have traditionally been divided into the rapidly growing mycobacteria (RGM) species, which grow in less than 7 days, and the slowly growing species, which require more than 7 days of incubation for mature growth on solid media. Among the RGM, the Mycobacterium abscessus group is the most commonly encountered mycobacteria in pulmonary disease, while Mycobacterium avium complex (MAC), Mycobacterium kansasii, and Mycobacterium xenopi (outside the USA) are the slowly growing species that most often cause pulmonary diseases [1]. Publications describing the diagnostic criteria for pulmonary NTM disease and laboratory documents providing guidelines for detection, molecular identification, and antimycobacterial susceptibility testing of mycobacteria have increased the awareness of NTM treatment [1–4].
The ‘M. abscessus group’ is the subject of current taxonomic controversy. Some investigators consider the ‘M. abscessus group’ to be composed of three subspecies: M. abscessus subsp. abscessus, M. abscessus subsp. massiliense, and M. abscessus subsp. bolletii, each of which were previously considered as full species prior to recent clinical and molecular taxonomy studies [5••, 6–8]. However, a 2011 study proposed the existence of only two subspecies: M. abscessus subsp. abscessus (for brevity referred to as M. abscessus hereafter) and M. abscessus subsp. bolletii (which includes both the former M. abscessus subsp. massiliense and M. abscessus subsp. bolletii). Because M. abscessus subsp. bolletii was named first, its name would receive priority by taxonomic rules and M. abscessus subsp. massiliense would be only taxonomic history [7]. Subspecies massiliense but not subsp. bolletii are of major clinical interest; therefore, many labs have continued to use the three subspecies names. Recent studies now suggest there are indeed three subspecies [9••].
Similarly, the slowly growing NTM have increased to approximately 75 species, with the MAC (Mycobacterium intracellulare, M. avium, and ‘MAC-X’ species) currently representing the most often isolated species of this group in clinical laboratories globally [10••].
Originally, the MAC was composed of two species, M. avium and M. intracellulare [1]. Isolates that were positive with a MAC molecular probe but negative with the individual probes for M. avium and M. intracellulare were subsequently found and referred to as ‘MAC-X’. Subsequently, M. avium was separated into four subspecies: M. avium subsp. avium, M. avium subsp. sylvaticum, M. avium subsp. hominissuis, and M. avium subsp. paratuberculosis, with M. hominissuis the cause of human lung disease within the M. avium species [11, 12]. Subsequent molecular taxonomic studies have shown that there are multiple species within the former ‘MAC-X’ group. These include at least seven pathogenic species: M. chimaera, M. vulneris, M. marseillense, M. timonense, M. arosiense, M. bouchedurhonense, and M. colombiense.
M. kansasii is currently considered the third most commonly isolated species of NTM in pulmonary disease in many countries, including the USA [1, 13•]. In contrast to MAC and the M. abscessus group (probably the second most commonly encountered NTM), M. kansasii is considered rapidly responsive to treatment as directed by laboratory data.
Laboratory diagnosis
The laborious, inefficient, and inaccurate (especially as it relates to newer species) conventional identification methods using biochemical schemes and chemotaxonomic methods such as high-performance liquid chromatography (HPLC) are rapidly being replaced by more rapid and definitive molecular gene sequencing or, even more recently, proteomic methods. Although the latter method has not yet been widely validated, proteomic methods using matrix-assisted laser desorption ionization mass spectrometry-time-of-flight (MALDI-TOF) are being used in large reference and clinical laboratories to identify some NTM [14, 15]. As with molecular methods, proteomic methods require quality-controlled commercial or in-house databases for definitive identification of species. The development of a database is a labor-intensive and time-consuming process requiring highly experienced technologists, and it is not possible without analyzing large numbers of isolates [16]. Commercial web-based systems such as MicroSeq (Applied Biosystems, Carlsbad, CA, USA), SmartGene (Smart Gene Inc., Raleigh, NC, USA) or RipSeq (Isentio, Paradis, Norway) may facilitate sequence analysis but should be carefully checked against reference strain sequences, as some systems have been slow to add newer species or make changes in taxonomic status of organisms.
16S ribosomal RNA (rRNA) gene sequencing is currently the most commonly sequenced gene for species identification [2]. The recent recognition of interspecies gene combinations in gene sequences has necessitated the use of multi-gene-based identification and typing methods for many RGM species or subspecies, including the M. abscessus group [9••, 17, 18, 19••, 20].
For differentiation of subspecies within M. abscessus, most investigators recommend the rpoB gene sequence be performed and supplemented with sequencing of the hsp65 gene or polymerase chain reaction (PCR) restriction enzyme analysis (PRA) [20] or another gene sequence [19••] such as erm gene [21].
Antimicrobial susceptibility testing
The current Clinical and Laboratory Standards Institute (CLSI) guidelines for NTM susceptibility testing recommend the broth microdilution method for both RGM and slowly growing species. Importantly, recommended antimicrobial breakpoints are only applicable as long as CLSI standard methods are used.
The most recent addition to the susceptibility recommendations involves the implementation of 14-day extended clarithromycin readings to detect isolates of RGM with inducible macrolide resistance.
For differentiating the three subspecies of M. abscessus, the major apparent difference is macrolide susceptibility among the M. abscessus subsp. massiliense in comparison with macrolide resistance in the majority of the M. abscessus [22••]. This susceptibility is due to the absence of a functional erythromycin methylase gene (erm) in M. abscessus subsp. massiliense in contrast to M. abscessus with an intact (functional) erm gene, which induces macrolide resistance [21, 22••]. The most recent finding of an isolate of M. abscessus subsp. massiliense with an erm gene complicates the picture and is discussed in this article.
Recent studies have shown that clinical response for only two antimicrobials (amikacin and clarithromycin) are correlated to laboratory susceptibility (minimal inhibitory concentration [MICs]) with MAC [23•, 24••]. Previous studies with MAC show a lack of correlation of in vitro MICs to clinical response to other (antituberculous) antimicrobials, including ethambutol, streptomycin, rifampin, and rifabutin [25••]. Thus, the American Thoracic Society (ATS) and Infectious Disease Association of America (IDSA), along with the CLSI, have recommended reporting susceptibility results for only clarithromycin with MAC, although clinical regimens should include a rifamycin and ethambutol [1, 3]. It is likely that new testing recommendations will soon include amikacin [26••].
Current CLSI guidelines for antimicrobial susceptibility testing of M. kansasii recommend in vitro testing of rifampin and clarithromycin only, unless the isolate is resistant to rifampin. In those cases, since treatment failure is usually associated with rifampin resistance or in unusual situations of drug intolerance, a secondary panel of antimicrobials, including amikacin, ciprofloxacin, ethambutol, linezolid, moxifloxacin, rifabutin, and trimethoprim-sulfamethoxazole, should be tested. Isoniazid and streptomycin may have clinical efficacy, but breakpoints to establish susceptibility and resistance have not yet been established [3]. Susceptibility testing should be repeated, and identification of the isolate should be confirmed, by genetic sequencing if the patient remains culture positive after 3 months of appropriate therapy [3].
The number of NTM species causing disease continue to increase. Although data are currently inadequate to recommend specific antimicrobial testing methods and breakpoints for these species, the CLSI recommends broth microdilution and application of the primary and secondary panel used for rifampin-resistant isolates of M. kansasii for testing of these species [3].
Epidemiology
Previously, NTM have not been considered as communicable human to human. In the USA, NTM are not mandatorily reported and thus only estimates of the incidence and prevalence of NTM infections are available in most areas.
However, recent reports in cystic fibrosis clinics have shown multiple patients infected with the same clonal strain of M. abscessus subsp. massiliense. This finding seems to suggest that transmission may be possible among immunocompromised individuals [9••, 10••, 27••]. If this transmission is proven true, there are far reaching implications that may necessitate changing infection control guidelines in cystic fibrosis centers.
The incidence of NTM in the USA (predominantly MAC, M. kansasii, and, more rarely, M. abscessus) has been associated with specific geographical areas, which may be related to differing water supplies [28, 29]. Tap water and biofilms in the pipe system appear to be specific sources for some NTM species, including M. avium [30, 31, 32•, 33], M. kansasii, M. xenopi (hot water) [34], and Mycobacterium simiae [29]. Increasing reports of the relationship of the formation of biofilms and NTM disease have prompted ecological and environmental studies to investigate and assess the patient exposure risk and the efficacy of prevention measures associated with biofilms in drinking water systems, pipe surfaces, medical devices such as catheters, and other surfaces to which biofilms can adhere. The fact that NTM grow and persist in water distribution systems and readily form biofilms suggests that they can also persist in household plumbing systems. [33] Falkinham reported in a 2007–2009 study that NTM were recovered significantly more often in households with water heater temperatures <125 °F than in those with temperatures >130 °F. [33] In addition to allowing NTM to adhere and live on artificial surfaces, biofilms also provide a protective shield against disinfectants [35, 36]. NTM associated with biofilms are known to be more resistant to biocides [35]. However, resistance to antimicrobials of specific NTM associated with biofilms is still being investigated [35]. A 2007 study showed that biofilm-grown cells of M. avium exposed to clarithromycin in catheters were significantly more resistant to the antimicrobial than were organisms grown in a suspension with clarithromycin present [37]. Only transparent colonies were detected among the persisters, as would be expected because the transparent colonies of M. avium are known to be more antibiotic resistant than opaque colony types [37].
Biofilms have been identified as important sources of nosocomial infections, including association with outbreaks involving bronchoscopes, endoscope washers, ice machines, and other instruments associated with tap or distilled water [36, 38]. Intriguingly, some species of MAC (i.e., MAC-X) have been recovered from the tap water of patients with MAC lung disease [32•, 33]. Recent studies showed that the household water of patients with MAC thought to contain M. intracellulare did not contain that species but actually contained other species of MAC, including predominantly M. chimaera (73 %) and other MAC-X species (20 %) despite the majority of patients being infected with M. intracellulare [32•]. This study was the first recognition of M. chimaera in household water of patients with MAC lung disease and clearly emphasizes the importance of species differentiation among isolates of MAC. These studies suggest that the reservoir for M. intracellulare is the environment outside the home, with commercial or natural soils used in planting and gardening the most likely source.
Treatment of Mycobacterium avium complex (MAC)
According to the most recent ATS/IDSA guidelines, the diagnosis of NTM lung disease requires a combination of patient symptoms, characteristic radiographic findings, and appropriate microbiologic data [1]. Current treatment guidelines by the ATS/IDSA recommend a macrolide regimen (clarithromycin/azithromycin, rifampin/rifabutin, and ethambutol with or without streptomycin/amikacin). Treatment is not appropriate for all individuals, and care must be taken to identify appropriate timing and medication regimens to ensure successful therapy. MAC, the most common species of NTM in the USA, can present in multiple ways clinically and radiographically, thus treatment options must be tailored individually. Nodular bronchiectasis disease can be best treated with three-times weekly therapy. This method is as effective as daily therapy and is accompanied by fewer side effects [24••]. It is the current treatment of choice recommended by the ATS and IDSA. In 2001, the British Thoracic Society published the first randomized controlled clinical trial describing treatment regimens for patients with MAC. However, because this regimen did not include a macrolide, it cannot be recommended for treatment of patients with MAC [39].
Upper lobe fibrocavitary disease is more common in individuals with advanced lung disease, and daily antimicrobial therapy in combination with an injectable aminoglycoside is warranted, although no clinical trials have compared this treatment regimen with a three-times weekly regiment. In addition to medication, other treatment modalities include smoking cessation, surgical consideration, airway clearance, exercise, and avoidance of environmental sources. The primary microbiologic goal of therapy for both disease types of MAC is 12 months of negative sputum cultures while on therapy. Macrolide-resistant MAC lung disease poses a formidable challenge to treating physicians and patients and is difficult, if even possible, to treat. Most specialists agree that prevention of resistance is key and therefore recommend adequate companion drugs to accompany macrolide therapy for all regimens. Once an isolate becomes resistant, continued macrolide therapy is not indicated except where the drug is also being used as an anti-inflammatory agent in the setting of bronchiectasis. Macrolide-resistant MAC lung disease should be referred to a center that specializes in treatment of NTM.
Pharmacologic treatment
-
Nodular bronchiectasis is typically treated with three-times weekly dosing of clarithromycin 1,000 mg or azithromycin 500 mg, ethambutol 25 mg/kg, and rifampin 600 mg (or rifabutin 150–300 mg) as recommended by the ATS (see Table 1) [1]. Dosing adjustments are usually needed for patients who weigh less than 50 kg or who are 80 years or older. Severe cases, including reinfection or relapse, may require the addition of a three-times weekly injectable aminoglycoside (amikacin or streptomycin). Inhaled amikacin may provide another option for therapy [40••] (see Table 1).
-
A macrolide with a single companion drug, ethambutol, may be adequate for minimal nodular bronchiectatic MAC disease if the patient is intolerant to a rifamycin, but data are limited. One study of 119 patients (60 on the two-drug regimen) in Japan demonstrated no significant differences in treatment response rate between 59 patients receiving the three-drug regimen compared with those receiving the two-drug regimen, although no follow-up data were provided [41]. Patients are considered treatment failures if they have not had a response (microbiologic, clinical, or radiographic) after 6 months of appropriate therapy or achieved culture negativity of sputum after 12 months of therapy.
-
Cavitary upper lobe MAC disease or extensive nodular bronchiectatic disease is treated with a daily regimen that includes clarithromycin 500–1,000 mg/day or azithromycin 250 mg/day, ethambutol 15 mg/kg per day and rifampin 10 mg/kg per day (maximum 600 mg) or rifabutin 150–300 mg/day (although in the latter setting, the drugs are often poorly tolerated) (see Table 1). Three times weekly therapy may be sufficient, but limited data are available. For patients with upper lobe cavitary changes on either daily or three times weekly oral drugs, intravenous or intramuscular amikacin or streptomycin at a dose of approximately 7–10 mg/kg three times weekly for at least the first 3 months is recommended.
-
Use of a quinolone and a macrolide and macrolide monotherapy are not recommended due to poor response and the frequent emergence of macrolide resistance [42, 43].
-
The best clinical response is to the first course of MAC treatment; therefore, adherence to and use of a multi-drug regimen are essential. Early specialist referral in patients with complex disease is generally warranted.
Susceptibility testing
-
Treatment of MAC is complicated by antimicrobial resistance to some agents and the lack of correlation of in vitro MIC data for agents other than amikacin and clarithromycin [10••, 44••]. More simply, the only drugs proven to correlate with a clinical response in MAC lung disease are macrolides and, as discovered recently, amikacin [26••].
-
Repeat susceptibility testing is necessary in individuals who have not had a response (microbiologic, clinical, or radiographic) after 6 months of appropriate therapy, reinfection, and relapse isolates.
-
Macrolide-resistant MAC cases are universally difficult to treat and should be referred to a specialty center.
Surgical management
-
Multiple studies have described surgical intervention in the era of macrolide use with relatively low operative mortality [45–48]. The reports of surgical therapy for NTM disease thus far do not establish consensus guidelines for selecting the best patient candidates for surgery, choosing the most advantageous timing for operative intervention, and choosing the specific surgical procedures with the best risk/benefit ratio in various clinical circumstances.
-
Most specialists agree that adjunctive surgical intervention in the hands of an experienced multidisciplinary team and center offers benefit to a select population of patients who have either NTM disease due to MAC that is difficult to treat with antibiotic therapy or who have not responded favorably in spite of aggressive medical therapy. Aggressive and appropriate antibiotic therapy should accompany surgical intervention.
Airway clearance
-
Data are limited regarding the use of bronchodilators, inhaled corticosteroids, and hypertonic saline for the treatment of NTM lung disease.
-
Many specialists agree that bronchodilation followed by the inhalation of hypertonic saline (3–7 %) with some type of chest physiotherapy (i.e. cough techniques, flutter valves, vest) provides some patients assistance with sputum expectoration.
Diet and lifestyle
-
Data support that at least some patients acquire NTM pathogens, including M. avium, from household plumbing [49, 50]. However, how much of a risk NTM in municipal water and household plumbing present and whether these water sources are the major source of NTM for most patients with NTM lung disease is still unknown. Additionally, the identification of species within MAC in household water samples continues to evolve [32•]. Recent studies have demonstrated that M. intracellulare is not present in household plumbing.
-
It is not certain that avoidance of showers without avoidance of other potential aerosol-generating activities associated with running water in the home would eliminate the risk of household NTM transmission. Increasing the temperature of the hot water heater to >130 °F or changing shower heads at regular intervals might decrease the risk of NTM transmission but the impact of these interventions are not known [33].
-
MAC can be isolated from soil; however, whether exposure to specific soil-based sources of MAC organisms may contribute to the development of NTM lung disease is unknown. It is unclear whether avoidance of soil and/or soil-based activities would minimize the risk of acquiring NTM lung disease.
-
There is no evidence to support any role for dietary changes in the treatment of MAC lung disease. Maintaining adequate caloric intake, body mass index (BMI), and following pre-albumin levels as a marker of nutrition may be helpful.
-
Exercise, including pulmonary rehabilitation, is encouraged in individuals with chronic lung disease, but this has not been studied in NTM lung disease. Aerobic activity and deep breathing activities such as in yoga are generally thought to be helpful.
Emerging or unproven therapies
-
Nebulized commercial amikacin in place of intravenous amikacin has been used for many years, but there are few studies of its safety, efficacy, when and where to use it, and what doses at what frequency. Susceptibility testing of amikacin with both MAC and M. abscessus is currently available, although the former has not yet been addressed by the CLSI [26••].
-
An investigational liposomal form of inhaled amikacin has been recently studied in a multi-center randomized trial in patients with refractory MAC and M. abscessus lung disease. The majority of patients are still receiving therapy. Further information regarding results of this trial are forthcoming [51].
-
The new diarylquinoline, bedaquiline, recently approved for multi-drug-resistant tuberculosis has been shown to have in vitro activity against MAC and may provide another oral alternative for patients with severe disease [52]. Randomized controlled trials are needed to delineate future use.
-
The role of clofazimine in the treatment of MAC lung disease is not clear; little is understood about long-term efficacy [53].
Treatment of the Mycobacterium abscessus group
The treatment of the M. abscessus group is difficult due to the inherent resistance of the organism to currently available antimicrobials and the lack of correlation of in vitro susceptibility data. Regimens include combinations of amikacin, cefoxitin, imipenem, linezolid, tigecycline, and a macrolide (depending upon the presence of a functional erm gene) (see Table 1). However, the most current NTM guidelines state that no antibiotic regimens have been shown to produce long-term sputum conversion [1]. This is true for most isolates of M. abscessus subsp. abscessus with a functional erm gene and subsequent macrolide resistance. Isolates with a non-functional erm gene (subsp. massiliense and about 15 % of isolates of subsp. abscessus) and subsequent macrolide susceptibility have a much better prognosis for cure. There is no consensus on duration of therapy and most experts rely on a combination of factors such as quantitative sputum cultures, resolution of symptoms, and radiographic response to determine length of therapy.
Pharmacological therapy
-
The choice between azithromycin or clarithromycin is based on tolerability and drug interactions. Although a 2012 study by Choi et al. [54••] suggested that azithromycin may be a better macrolide than clarithromycin, this has not been assessed in clinical trials. The use of the macrolides is severely limited due to the majority of M. abscessus having an inducible erm gene [55•]. For M. abscessus subsp. massiliense, using a macrolide in combination with parenteral antibiotics remains a key component of therapy (see Table 1).
-
Most M. abscessus group isolates are susceptible to amikacin, and it remains the most active available drug. However, due to its well known toxicities, its long-term use is limited. The effectiveness of the inhaled form of amikacin has been assessed in 20 treatment-refractory patients, 15 of whom had M. abscessus [40••]. Four patients had clearance of M. abscessus in their sputum. The role of inhaled amikacin in patients with M. abscessus will perhaps be better determined after the results of the randomized, placebo-controlled trial using liposomal amikacin for treatment-refractory patients is published. Mutational resistance to amikacin is a concern if additional effective drugs are not included, as mutational resistance occurs with a single base pair change in a single copy gene (16S rRNA gene) [40••].
-
The use of the remaining drugs, including imipenem, cefoxitin, and linezolid should be based on the in vitro susceptibility data and tolerability of the drug. The ATS/IDSA guidelines recommend up to 12 mg/day of cefoxitin, but adverse effects limit that quantity of dosing [1]. It is commonly given at an intravenous dose of 4 g twice daily. Czaja et al. [56••] published pharmacokinetic data on continuous infusion of cefoxitin 2 g over 8 h in three patients with M. abscessus; only one patient achieved a steady state concentration in serum >16 [56••]. This study illustrates the paradox between dosing of cefoxitin and the inconsistent drug levels achieved. The treatment regimens are difficult secondary to adverse effects that limit standard dosing practices that are not used in M. abscessus infections.
-
Tigecycline, the first clinically available injectable glycylcycline, can be used as part of a regimen in treating M. abscessus, but there are no established breakpoints, and the optimum dosage has yet to be determined. However, most isolates of M. abscessus have MICs ≤1 μg/mL [10••].Wallace et al. [57••] reported 52 patients with M. abscessus who received tigecycline as salvage therapy at an initial dose of 50 mg, with dose adjustment for tolerability. A total of 36 patients had pulmonary infection, and 16 (44.4 %), 11 (30.6 %), and nine (25 %) had clinical improvement, failed, and indeterminate response, respectively. Those who received tigecycline for ≥1 month had better clinical improvement and no deaths were attributed to tigecycline. Not surprisingly, nausea and vomiting were the most common adverse events in 33 (63.5 %) and 18 (34.6 %), respectively. This study is an important assessment of the efficacy and safety of tigecycline as part of a salvage regimen for patients with M. abscessus.
Surgical management
-
The use of surgery as part of the treatment approach in non-cystic fibrosis M. abscessus lung infection is regarded as a key component in combination with antimicrobials and has been shown to improve treatment responses and relapses [58, 59].
-
The timing and extent of surgery must rely on a multidisciplinary team and center. The published morbidity and mortality associated with surgery has been low [46, 48].
-
The role of lung transplantation in cystic fibrosis patients and active M. abscessus infection also requires a multidisciplinary team and center that are skilled in the management of potential M. abscessus-related complications. Cystic fibrosis patients with and without M. abscessus have had similar outcomes [60].
Airway clearance
-
The approach and recommendations are the same for M. abscessus as for other NTM, including MAC.
Diet and lifestyle
-
Less information is known regarding the direct acquisition of M. abscessus from its environmental niche compared with MAC. Studies have identified M. abscessus in water and have linked strains from patient isolates to potable water [28, 61].
-
General recommendations regarding aerosolization of water, showering, and soil exposure do not exist because the mechanism by which patients acquire M. abscessus and the unknown reduction of risk of acquisition, if any, is unclear.
-
The transmission of M. abscessus between cystic fibrosis patients has been reported [62]. Further investigation and evaluation is warranted, and this transmission cannot be applied broadly to the general public. It does appear to potentially pose a significant problem in this distinct group of patients.
Emerging therapies
-
The new diarylquinoline, bedaquiline, has been shown to have in vitro activity against M. abscessus [52]. However, the role of bedaquiline in the current armamentarium of M. abscessus antimicrobials needs further assessment in clinical studies.
-
The novel oxazolidinone, tedizolid (DA-7157), has excellent in vitro activity against M. abscessus and would also need to be tested in clinical trials [63].
Treatment of Mycobacterium kansasii pulmonary disease
Of the NTM involved in pulmonary disease, M. kansasii causes both cavitary disease and nodular disease in the setting of bronchiectasis, the former most similar to the clinical picture of M. tuberculosis [64]. Untreated strains of M. kansasii are susceptible to rifamycins (rifampin and rifabutin) with MICs ≤1 μg/mL [65]. Other than isoniazid, which is not currently recommended for reporting by the CLSI since no broth MIC breakpoints are available, MICs to other antimicrobials seem to correlate well with clinical response. In fact, clinical response has been so favorable that currently only rifampin and clarithromycin should be reported except in rare cases of drug intolerance or in cases in which the strain of M. kansasii has become rifampin resistant. In both situations, the cases should be carefully assessed by a physician experienced in treating these patients. In these situations, testing of ancillary agents such as amikacin, ethambutol, quinolones, linezolid, trimethoprim-sulfamethoxazole, tetracyclines, and rifabutin becomes important [1, 3]. Surprisingly, the prognosis for cure of M. kansasii infection, even in patients with rifampin-resistant isolates, is good [65].
A 2003 study by Griffith et al. suggests that an intermittent regimen (three times weekly) of rifampin (300–600 mg), ethambutol (25 mg/kg), and macrolide (clarithromycin or azithromycin, 1000 mg or 500 mg, respectively) is effective, less toxic, and less expensive than the standard 18-month daily dosage regimen [62] including rifampin, ethambutol, and isoniazid for rifampin-susceptible isolates of M. kansasii (see Table 1). In the intermittent regimen, the mean time to sputum conversion to negative culture was less than 2 months [64]. This regimen is currently being recommended for most cases of pulmonary M. kansasii[1, 64].
References and Recommended Reading
Papers of particular interest, published recently, have been highlighted as: • Of importance •• Of major importance
Griffith DE, Aksamit T, Brown-Elliott BA, et al. An official ATS/IDSA statement: Diagnosis, treatment and prevention of nontuberculous mycobacterial diseases. Am J Respir Crit Care Med. 2007;175:367–416.
Clinical and Laboratory Standards Institute. Interpretive criteria for identification of bacteria and fungi by DNA target sequencing: approved guideline. CLSI document 2008;MM18-A.
Clinical and Laboratory Standards Institute. Susceptibility testing of mycobacteria, nocardiae, and other aerobic actinomycetes: approved standard—second edition. CLSI document 2011;M24-A2.
Clinical and Laboratory Standards Institute. Laboratory detection and identification of mycobacteria; approved guidelines. CLSI document 2008;M48-A.
Bastian S, Veziris N, Roux A-L, et al. Assessment of clarithromycin susceptibility in strains belonging to the Mycobacterium abscessus group by erm(41) and rrl sequencing. Antimicrob Agents Chemother. 2011;55:775–81. Describes/correlates molecular sequence types to phenotypic susceptibility in M. abscessus.
Kim H-Y, Kim B-J, Kook Y, Yun YJ, Shin JH, Kook YH. Mycobacterium massiliense is differentiated from Mycobacterium abscessus and Mycobacterium bolletii by erythromycin ribosome methyltransferase gene (erm) and clarithromycin susceptibility patterns. Microbiol Immunol. 2010;54:347–53.
Leao SC, Tortoli E, Euzeby JP, Garcia MJ. Proposal that Mycobacterium massiliense and Mycobacterium bolletii be united and reclassified as Mycobacterium abscessus subsp. bolletii comb. nov., designation of Mycobacterium abscessus subsp. abscessus subsp. nov. an amended description of Mycobacterium abscessus. Int J Syst Evol Microbiol. 2011;61:2311–3.
Zelazny AM, Root JM, Shea YR, et al. Cohort study of molecular identification and typing of Mycobacterium abscessus, Mycobacterium massiliense and Mycobacterium bolletii. J Clin Microbiol. 2009;47:1985–95.
Tettelin H, Davidson RM, Agrawal S, et al. High-level relatedness among Mycobacterium abscessus subsp. massiliense strains from widely separated outbreaks. Emerg Infect Dis. 2014;20:364–71. Important description of the molecular relatedness of strains that may suggest first person to person transmission among NTM. Also provides basis for acceptance of three subspecies rather than only two subspecies of M. abscessus.
Brown-Elliott BA, Nash KA, Wallace Jr RJ. Antimicrobial susceptibility testing, drug resistance mechanisms, and therapy of infections with nontuberculous mycobacteria. Clin Microbiol Rev. 2012;25:545–82. Recent update describing drug mechanisms, antimicrobial susceptibility methods, and treatment of NTM infections.
Turenne CY, Wallace RJJ, Behr MA. Mycobacterium avium in the postgenomic era. Clin Microbiol Rev. 2007;20:205–29.
Tran QT, Han XY. Subspecies identification and significance of 257 clinical strains of Mycobacterium avium. J Clin Microbiol 2014;In press.
Jang MA, Koh WJ, Huh HJ, et al. Distribution of nontuberculous mycobacteria by multigene sequence-based typing and clinical significance of isolated strains. J Clin Microbiol. 2014;52(4):1207–12. Important assessment using multiple genes and correlation to clinical significance of NTM.
Teng S-H, Chen C-M, Lee M-R, et al. Matrix-assisted laser desorption ionization-time of flight mass spectrometry can accurately differentiate between Mycobacterium massiliense (M. abscessus subspecies bolletii) and M. abscessus (sensu stricto). J Clin Microbiol. 2013;51:3113–6.
Mather CA, Rivera SF, Butler-Wu SM. Comparison of the Bruker Biotyper and Vitek MS matrix-assisted laser desorption ionization-time of flight mass spectrometry systems for identification of mycobacteria using simplified protein extraction protocols. J Clin Microbiol. 2014;52:130–8.
Turenne CY, Tschetter L, Wolfe J, Kabani A. Necessity of quality-controlled 16S rRNA gene sequence databases: Identifying nontuberculous Mycobacterium species. J Clin Microbiol. 2001;39:3637–48.
Macheras E, Roux A-L, Ripoll F, et al. Inaccuracy of single-target sequencing for discriminating species of the Mycobacterium abscessus group. J Clin Microbiol. 2009;47:2596–600.
Macheras E, Roux A-L, Bastian S, et al. Multilocus sequence analysis and rpoB sequencing of Mycobacterium abscessus (sensu Lato) strains. J Clin Microbiol. 2011;49:491–9.
Shallom SJ, Gardina PJ, Myers TG, et al. New rapid scheme for distinguishing the subspecies of the Mycobacterium abscessus group and identification of Mycobacterium massiliense with inducible clarithromycin resistance. J Clin Microbiol. 2013;51:2943–9. Provides more evidence of three subspecies of M. abscessus and information about molecular identificaiton of subspecies.
Blauwendraat C, Dixon GLJ, Hartley JC, Foweraker J, Harris KA. The use of a two-gene sequencing approach to accurately distinguish between the species within the Mycobacterium abscessus complex and Mycobacterium chelonae. Eur J Clin Microbiol Infect Dis. 2012;31:1847–53.
Nash KA, Brown-Elliott BA, Wallace Jr RJ. A novel gene, erm(41), confers inducible macrolide resistance to clinical isolates of Mycobacterium abscessus but is absent from Mycobacterium chelonae. Antimicrob Agents Chemother. 2009;53:1367–76.
Koh WJ, Jeon K, Lee NY, et al. Clinical significance of differentiation of Mycobacterium massiliense from Mycobacterium abscessus. Am J Respir Crit Care Med. 2011;183:405–10. Provides clinical evidence of the differences in treatment outcomes for patients in Korea with M. abscessus subsp. abscessus compared with M. abscessus subsp. massiliense.
Brown-Elliott BA, Wallace Jr RJ. Enhancement of conventional phenotypic methods with molecular-based methods for the more definitive identification of nontuberculous mycobacteria. Clin Microbiol News. 2012;34:109–15. Discusses the superiority of molecular-based methods for identification of NTM compared to conventional methods.
Wallace Jr RJ, Brown-Elliott BA, McNulty S, et al. Macrolide/azalide therapy for nodular-bronchiectatic Mycobacterium avium complex lung disease. Chest. 2014;146:276–82. Recent clinically based publication describing outcomes of US patients with pulmonary MAC who were treated with macrolide-based therapy comparing daily versus three times weekly regimens and azithromycin versus clarithromycin.
Kobashi Y, Abe M, Mouri K, Obase Y, Kato S, Oka M. Relationship between clinical efficacy for pulmonary MAC and drug-sensitivity test for isolated MAC in a recent 6-year period. J Infect Chemother. 2012;18:436–43. Recent clinically based publication describing outcomes of non-US patients with pulmonary MAC as correlated with antimicrobial susceptibility.
Brown-Elliott BA, Iakhiaeva E, Griffith DE, et al. In vitro activity of amikacin against isolates of Mycobacterium avium complex with proposed MIC breakpoints and finding of a 16S rRNA gene mutation in treated isolates. J Clin Microbiol. 2013;51:3389–94. ERRATUM JCM 2014; 52:1311. Recent publication describing the finding of a 16S rRNA gene mutation in patients treated with amikacin who developed amikacin resistance. This paper also shows that in vitro susceptibility testing of amikacin correlates with clinical responses (only the second antimicrobial after clarithromycin to show this correlation).
Aitken ML, Limaye A, Pottinger P, et al. Respiratory outbreak of Mycobacterium abscessus subspecies massiliense in a lung transplant and cystic fibrosis center. Letter to the Editor. Am J Respir Crit Care Med. 2012;185:231–3. This is the first report of an outbreak of M. abscessus subsp. massiliense in a cystic fibrosis clinic in the USA. Recent studies suggest that this outbreak may provide evidence for the first report of human-to-human transmission of the M. abscessus group. This is the first report of disease due to an apparent epidemic genotype of M. abscessus subsp. massiliense.
Brown-Elliott BA, Wallace Jr RJ, Tichindelean C, et al. Five year outbreak of community- and hospital-acquired Mycobacterium porcinum infections related to public water supplies. J Clin Microbiol. 2011;49:4231–8.
El Sahly HM, Septimus E, Soini H, et al. Mycobacterium simiae pseudo-outbreak resulting from a contaminated hospital water supply in Houston, Texas. Clin Infect Dis. 2002;35:802–7.
Iakhiaeva E, McNulty S, Brown-Elliott BA, et al. Mycobacterial interspersed repetitive-unit-variable-number tandem-repeat (MIRU-VNTR) genotyping of Mycobacterium intracellulare for strain comparison with establishment of a PCR database. J Clin Microbiol. 2013;51:409–16.
Tichenor WS, Thurlow J, McNulty S, Brown-Elliott BA, Wallace Jr RJ, Falkinham III JO. Nontuberculous mycobacteria in household plumbing as possible cause of chronic rhinosinusitis. Emerg Infect Dis. 2012;18:1612–7.
Wallace Jr RJ, Iakhiaeva E, Williams M, et al. Absence of Mycobacterium intracellulare and the presence of Mycobacterium chimaera in household water and biofilm samples of patients in the U.S. with Mycobacterium avium complex respiratory disease. J Clin Microbiol. 2013;51:1747–52. This publication describes the absence of M. intracellulare in household water samples and shows that sites other than household water systems should be considered when assessing patients with M. intracellulare. It also demonstrates the presence of a recently described species of MAC (M. chimaera in household water).
Falkinham III JO. Nontuberculous mycobacteria from household plumbing of patients with nontuberculous mycobacteria disease. Emerg Infect Dis. 2011;17:419–24.
Yates MD, Grange JM, Collins CH. The nature of mycobacterial disease in Southeast England, 1977-84. J Epidemiol Community Health. 1986;40:295–300.
Bardouniotis E, Ceri H, Olson ME. Biofilm formation and biocide susceptibility testing of Mycobacterium fortuitum and Mycobacterium marinum. Curr Microbiol. 2003;46:28–32.
Schulze-Röbbecke R, Feldman C. Fischeder r, Janning B, Exner M, Wahl G. Dental units: an environmental study of sources of potentially pathogenic mycobacteria. Tuberc Lung Dis. 1995;76:318–23.
Falkinham III JO. Growth in catheter biofilms and antibiotic resistance of Mycobacterium avium. J Med Microbiol. 2007;56:250–4.
Brown-Elliott BA, Wallace Jr RJ. Nontuberculous mycobacteria. In: Mayhall CG, editor. Hospital Epidemiology and Infection Control. 4th ed. Philadelphia, PA: Lippincott Williams & Wilkins; 2012. p. 593–608.
Research Committee of the British Thoracic Society. First randomised trial of treatments for pulmonary disease caused by M. avium-intracellulare, M. malmoense, and M. xenopi in HIV negative patients: rifampicin, ethambutol and isoniazid versus rifampicin and ethambutol. Thorax. 2001;56:167–72.
Olivier KN, Shaw PA, Glaser TS, et al. Inhaled amikacin for treatment of refractory pulmonary nontuberculous mycobacterial disease. Ann Am Thorac Soc. 2014;11:30–5. Recent publication providing the first detailed description of the efficacy and adverse events related to the use of inhaled amikacin in the regimen for patients with refractory pulmonary NTM disease (MAC and M. abscessus).
Miwa S, Shirai M, Toyoshima M, et al. Efficacy of clarithromycin and ethambutol for Mycbaacterium avium cxomplex pulmonary disease. A preliminary study. Ann Am Thorac Soc. 2014;11:23–9.
Meier A, Heifets L, Wallace Jr RJ, et al. Molecular mechanisms of clarithromycin resistance in Mycobacterium avium: observation of multiple 23S rDNA mutations in a clonal population. J Infect Dis. 1996;174:354–60.
Griffith DE, Brown-Elliott BA, Langsjoen B, et al. Clinical and molecular analysis of macrolide resistance in Mycobacterium avium complex lung disease. Am J Resp Crit Care Med. 2006;174:928–34.
van Ingen J, Boeree MJ, van Soolingen D, Mouton JW. Resistance mechanisms and drug susceptibility testing of nontuberculous mycobacteria. Drug Resist Updat. 2012;15:149–61. Excellent review of antibiotic resistance mechanisms and antimicrobial susceptibility methods for testing of NTM.
Nelson KG, Griffith DE, Brown BA, Wallace Jr RJ. Results of operation in Mycobacterium avium-intracellulare lung disease. Ann Thorac Surg. 1998;66:325–30.
Mitchell JD, Bishop A, Cafaro A, Weyant MJ, Pomerantz M. Anatomic lung resection for nontuberculous mycobacterial disease. Ann Thorac Surg. 2008;85:1887–92. discussion 92-3.
Shiraishi Y, Nakajima Y, Takasuna K, Hanaoka T, Katsuragi N, Konno H. Surgery for Mycobacterium avium complex lung disease in the clarithromycin era. Eur J Cardio-Thorac Surg. 2002;21:314–8.
Yu JA, Pomerantz M, Bishop A, Weyant MJ, Mitchell JD. Lady Windermere revisited: treatment with thoracoscopic lobectomy/segmentectomy for right middle lobe and lingular bronchiectasis associated with non-tuberculous mycobacterial disease. Eur J Cardio-Thorac Surg. 2011;40:671–5.
Falkinham 3rd JO, Iseman MD, de Haas P, van Soolingen D. Mycobacterium avium in a shower linked to pulmonary disease. J Water Health. 2008;6:209–13.
Dirac MA, Horan KL, Doody DR, et al. Environment or host? A case-control study of risk factors for Mycobacterium avium complex lung disease. Am J Resp Crit Care Med. 2012;186:684–91.
Benwill JL, Philley JV, Taskar V, Brown-Elliott BA, Griffith DE, Wallace RJ Jr. Inhaled amikacin for the treatment of pulmonary Mycobacterium avium complex (MAC) infection. ATS 2014 International Conference 2014:Abstract A4112.
Andries K, Verhasselt P, Guillemont J, et al. A diarylquinoline drug active on the ATS synthase of Mycobacterium tuberculosis. Science. 2005;307(5707):223–7.
van Ingen J, Egelund EF, Levin A, et al. The pharmacokinetics and pharmacodynamics of pulmonary Mycobacterium avium complex disease treatment. Am J Respir Crit Care Med. 2012;186:559–65.
Choi GE, Shin SJ, Won CJ, et al. Macrolide treatment for Mycobacterium abscessus and Mycobacterium massiliense infection and inducible resistance. Am J Respir Crit Care Med. 2012;186:917–25. Recent publication comparing treatment outcomes of adult (non cystic fibrosis) patients in Korea with M. abscessus subsp. abscessus and M. abscessus subsp. massiliense.
Brown-Elliott BA, S. V, R. V, et al. Sequencing of the erm gene in isolates of Mycobacterium abscessus subspecies abscessus with low clarithromycin MICs. ASM 114th General Meeting 2014. Recent publication describing M. abscessus subsp. abscessus isolates in US patients with a non-functional erm gene sequevar and susceptible clarithromycin MICs following extended incubation.
Czaja CA, Levin A, Moridani M, Krank JL, Curran-Everett D, Anderson PL. Cefoxitin continuous infusion for lung infection caused by Mycobacterium abscessus group. Antimicrob Agents Chemother. 2014;58:3570–1. Describes optimization of cefoxitin treatment for lung infection caused by the M. abscessus group.
Wallace Jr RJ, Dukart G, Brown-Elliott BA, Griffith DE, Scerpella EG, Marshall B. Clinical experience in 52 patients with tigecycline-containing regimens for salvage treatment of Mycobacterium abscessus and Mycobacterium chelonae infections. J Antimicrob Chemother. 2014;69:1945–53. First publication describing clinical experience of a large number of patients with refractory M. abscessus and Mycobacterium chelonae infections who were treated with tigecycline.
Jarand JM, Levin A, Zhang L, Huitt G, Mitchell JD, Daley CL. Clinical and microbiologic outcomes in patients receiving treatment for Mycobacterium abscessus pulmonary disease. Clin Infect Dis. 2010;52:564–71.58.
Griffith DE, Girard WM, Wallace Jr RJ. Clinical features of pulmonary disease caused by rapidly growing mycobacteria. An analysis of 154 patients. Am Rev Respir Dis. 1993;147:1271–8.
Lobo LJ, Chang LC, Esther Jr CR, Gilligan GH, Tulu Z, Noone PG. Lung transplant outcomes in cystic fibrosis patients with pre-operative Mycobacterium abscessus respiratory infrections. Clin Transpl. 2013;27:523–9.
Thomson R, Tolson C, Sidjabat H, Huygens F, Hargreaves M. Mycobacterium abscessus isolated from municipal water - a potential source of human infection. BMC Infect Dis. 2013;13:241–7.
Bryant JM, Grogono DM, Greaves D, et al. Whole-genome sequencing to identity transmission of Mycobacterium abscessus between patients with cystic fibrosis: a retrospective cohort study. Lancet. 2013;381:1551–60.
Vera-Cabrera L, Brown-Elliott BA, Wallace Jr RJ, et al. In vitro activities of the novel oxazolidinones DA-7867 and DA-7157 against rapidly and slowly growing mycobacteria. Antimicrob Agents Chemother. 2006;50:4027–9.
Griffith DE, Brown-Elliott BA, Wallace Jr RJ. Thrice-weekly clarithromycin-containing regimen for treatment of Mycobacterium kansasii lung disease: results of a preliminary study. Clin Infect Dis. 2003;37:1178–82.
Wallace Jr RJ, Dunbar D, Brown BA, et al. Rifampin-resistant Mycobacterium kansasii. Clin Infect Dis. 1994;18:736–43.
Compliance with Ethics Guidelines
Conflict of Interest
Barbara A. Brown-Elliott and Richard J. Wallace, Jr. have grants from Insmed, Amon G. Carter Foundation, Pfizer, and Cubist, and received support for travel to present study data at national meetings. All authors have participated in previous in vitro MIC studies and clinical trials and have received previous funding from Insmed (inhaled amikacin, Arikace), Pfizer Labs (tigecycline, azithromycin), Abbott Labs (clarithromycin), and Pharmacia Labs (rifabutin, linezolid) in addition to receiving research funding from Cubist (tedizolid) and a pending grant from Janssen Pharmaceuticals (bedaquiline) for future in vitro studies to be performed at The University of Texas Health Science Center at Tyler.
Human and Animal Rights and Informed Consent
All clinical trials involving human subjects were approved by the Instititutional Review Board at the University of Texas Health Science Center at Tyler.
This article does not contain any studies with animal subjects performed by the author.
Author information
Authors and Affiliations
Corresponding author
Rights and permissions
About this article
Cite this article
Brown-Elliott, B.A., Philley, J.V., Benwill, J.L. et al. Current Opinions in the Treatment of Pulmonary Nontuberculous Mycobacteria in Non-Cystic Fibrosis Patients: Mycobacterium abscessus Group, Mycobacterium avium Complex, and Mycobacterium kansasii . Curr Treat Options Infect Dis 6, 392–408 (2014). https://doi.org/10.1007/s40506-014-0032-2
Published:
Issue Date:
DOI: https://doi.org/10.1007/s40506-014-0032-2