Abstract
Leaf area (LA) is commonly used to evaluate plant traits such as leaf development and plant growth, which depend on sunlight interception. However, methods for obtaining LA are destructive and require many leaf samples that might not be available. The use of linear equations to estimate LA without destructive procedures has been successfully used in crops and weeds studied in the field and in potted-plant experiments. In the Brazilian savanna (Cerrado), many studies still depend on destructive leaf sampling because equations would be specific for each species. We developed a non-destructive model to estimate LA of five Vochysiaceae species from the cerrado, as this family exclusively comprised Al-accumulating species. In this study, LA versus leaf length (L) and leaf width (W) was regressed, and the best-fitted model (LA = −2.133 + 0.719 LW, R 2 = 0.99) was validated to estimate LA in Qualea cordata Spreng., Qualea grandiflora Mart., Salvertia convallariodora A. St.-Hil., Vochysia cinnamomea Pohl., and Vochysia tucanorum Mart. with precise accuracy. This model may help scientists with distinct interests in plants from this family.
Similar content being viewed by others
Avoid common mistakes on your manuscript.
Introduction
Leaf area (LA) is largely explored in studies of leaf development, plant growth, and sunlight interception (Blanco and Folegatti 2005; Lusk et al. 2008). However, most of the techniques used to estimate LA require excising leaves from plants and scanning them in the lab. When considering different treatments, big populations, or several samples, destructive procedures can be time-consuming. These techniques may also interfere on physiological and phenological responses due to canopy reduction (Chabot and Hicks 1982). On the other hand, there are portable LA meters available on the market, such as the LI-3000C portable meter (LI-COR, Lincoln, NE, USA). However, these instruments may cost some thousands of dollars.
Equations derived from non-destructive models, when available, represent a free and fast method that can be used in situ, providing LA estimates without leaf excisions (Norman and Campbell 1989). One of the most frequently used non-destructive models to estimate LA is based on equations using leaf length (L) and width (W) (Blanco and Folegatti 2005). These measurements can be easily made in the field and greenhouse using a ruler.
These non-destructive models are generally linear equations, making it very easy to the user to obtain the final LA using a simple calculator. Therefore, these models have long been used to estimate LA in crops [e.g., Zingiber officinale Roscoe (Ancy and Jayachandran 1994), Vitis labruscana L.H. Bailey (Williams and Martinson 2003), Cucumis sativus L., Cucurbita spp. (Blanco and Folegatti 2005), Vicia faba L. (Peksen 2007), Rosa hybrida E.H.L.Krause, (Rouphael et al. 2010), Calendula officinalis L., Dahlia pinnata Cav., Dianthus barbatus L., and Viola wittrockiana Gams ex Nauenb. & Buttler (Giuffrida et al. 2011)] and weeds [Amaranthus spp. (Carvalho and Christoffoleti 2007), Ageratum conyzoides (L.) L. (Bianco et al. 2008), Pistia stratiotes L. (Carvalho et al. 2011a), Merremia cissoides (Lam.) Hallier f. (Carvalho et al. 2011b)]. The massive usage of these models for studying crops and weeds may have two interpretations. These species might require studies in which LA is extremely important, especially because plant growth analysis is paramount in the interaction between crops and weeds. Another interpretation is that LA is difficult to assess, especially in tree species, and that is why studies with crops and weeds benefit from these models.
The Brazilian savanna (cerrado), for instance, has been recognized as a global biodiversity hotspot with more than 10,000 plant species, of which 44 % are endemic (Simon et al. 2009). However, whole-plant studies, trying to understand LA enlargement or its oscillation over time, are not so frequent in studies involving forests and savannas. As a result, few studies of cerrado woody species include LA measurements. Just recently, Souza and Habermann (2014) developed the first non-destructive model to estimate LA in Styrax pohlii A. DC., and Styrax ferrugineus Nees & Mart. (Styracaceae), congeners from Cerrado areas, and these models were used in a study with S. pohlii potted plants (Kissmann et al. 2014). Similar models were proposed to measure LA in Vernonia ferruginea Less. (Souza and Amaral 2015), another cerrado woody species.
Due to difficulty in measuring LA in tree species, specific leaf area (SLA, ratio of the leaf area per leaf dry mass) is used as an alternative trait to estimate how LA could vary in response to several conditions. In cerrado vegetation, an important condition is certainly the high aluminum (Al) concentration in the soil (Haridasan 2008). As a result, Al-accumulating and non-accumulating species coexist, growing on acidic (pH < 4.0) soils with low fertility. In this scenario, the increase in SLA is slower in Al-accumulating plants as compared to non-accumulating species (Souza et al. 2015), suggesting that in the cerrado, Al accumulation is associated with LA changes, although LA was never directly studied under such perspective due to a lack of non-destructive LA models for field studies.
The Vochysiaceae family comprises eight genera, and approximately 200 species of trees and shrubs distributed throughout tropical regions of the Americas and Africa (Carnevale Neto et al. 2011). In Brazil, Qualea and Vochysia are the most common genera of Vochysiaceae in the Cerrado domain, and this family exclusively comprised Al-accumulating species (Haridasan 1982; Medeiros and Haridasan 1985; Haridasan and Araújo 1988; Souza et al. 2015). In addition, non-destructive models to measure LA are not available for this important Al-accumulating family. Due to the importance of this family in the cerrado (Sajo and Rudall 2002; Haridasan 2008), these plants are not only studied under the Al accumulation perspective, but also from ecological, botanical, and functional standpoints (Paulilo et al. 1993; Barbosa et al. 1999; Haridasan 2008). Therefore, we developed and validated a linear model to predict LA of five Vochysiaceae species (Qualea cordata Spreng., Q. grandiflora Mart., Salvertia convallariodora A. St-Hil., V. cinnamomea Pohl., and V. tucanorum Mart.).
Materials and methods
Plant material and site description
Leaves of Qualea cordata, Q. grandiflora, Salvertia convallariodora, Vochysia cinnamomea, and V. tucanorum were collected from adult trees (2–3 m in height) growing at the Bauru Botanic Garden (22°20′39″S e 49°00′51′′W) in September 2014. Bauru is a city located in the center of São Paulo state, southeastern Brazil.
The vegetation of Bauru Botanic Garden (322 ha) comprised ‘cerradão’ and cerrado sensu stricto, which are forest- and savanna-type physiognomies, respectively, typical of Cerrado areas; semideciduous and gallery forests are also part of the landscape (Pinheiro and Monteiro 2009). The garden is at 630 m of altitude, and the soil is a red latossol, under the influence of a seasonal climate with a dry winter (May–September) and wet summer (October–April). Local annual rainfall is approximately 1500 mm, and mean annual temperature is 22 °C (Cavassan et al. 1984).
Experimental design and model development
We randomly collected fully expanded leaves from four quadrants (N, S, E, W) of each plant canopy at breast height, using 3–5 plants per species. To avoid under- or overestimation of LA, leaves with mechanical damage or partially eaten by herbivores were not included in the samples. Although using only healthy and fully expanded leaves may overestimate LA, including damaged leaves into the samples could add another factor to our model, such as the herbivory rate, which is seasonally dependent. For instance, the herbivory rate varies between seasons for Q. parviflora (Gonçalves-Alvim et al. 2006). In addition, LA models developed for many species consider only green, healthy, and fully expanded leaves in order to avoid uncontrolled factors into the models (Kandiannan et al. 2009; Rouphael et al. 2010; Souza and Amaral 2015).
Leaf area (LA), leaf length (L), and width (W) were measured on pooled 100 leaves per species (n = 500), using a scanner (C4280 Photosmart; Hewlet Packard, USA) coupled to a microcomputer running an image scanning software (ImageJ for Windows—Microsoft, USA). Leaves were scanned at 300 dots per inch (dpi), and L was considered as the maximum length along the midrib and W, as the maximum width perpendicular to the midrib (Souza and Amaral 2015) (Fig. 1). Mean values, standard deviations (SD), and minimum and maximum values of LA, L, and W of each species are shown in Table 1.
Regression equations were obtained from the relationship between the dependent variable, LA, and independent variables L, W, L2, W2, LW, and L2W2 (Table 2). For two-dimensional models, involving LW and L2W2, the collinearity between these variables was tested using the variance inflation factor (VIF) (Marquardt 1970) and the tolerance value (T) (Gill 1986). If VIF was larger than 10 or if T was smaller than 0.10, one of the variables (L or W) should be excluded from the model.
We obtained the coefficient of determination (R 2), mean square error (MSE), root mean square error (RMSE), and the prediction of sum of squares (PRESS). For us, the best model was represented by the combination of the highest R 2 and lowest MSE, RMSE, and PRESS (Peksen 2007; Souza and Amaral 2015). We checked the variance of leaf shape (LA, L, and W) between the species by analysis of variance (ANOVA) and compared mean values by Tukey test at 5 % level.
Validation of models
To validate the best-fitted model (highest R 2 and lowest MSE, RMSE, and PRESS), additional 100 leaves from different plants of each species were collected at the same site, in September 2014. We measured LA, L, and W using the same procedures described above. The predicted leaf area (PLA) for each species was determined according to the parameters obtained from the best-fitted model selected. To test the correlation between PLA and observed LA (OLA—leaf area measured by leaf scanning and computing LA with the ImageJ software) (Peksen 2007; Souza and Amaral 2015), linear equations were used to obtain PLA for each species. Differences between OLA and PLA were plotted (Fig. 2). To estimate the relative bias, we considered mean values ± 3 SD of the difference between OLA and PLA. If such differences are normally distributed, then 97 % of them must lie between the limits of agreement (Peksen 2007).
Results
In the dataset for model construction (n = 500), mean values of leaf area (LA), length (L), and width (W) differed significantly (P < 0.05) between the species. Q. grandiflora showed the largest LA, while Q. cordata and V. tucanorum showed the smallest ones. As naturally expected, leaves with the largest LA, as exhibited by Q. grandiflora, also showed the longest and widest leaves, and in contrast (but also showing harmony between leaf dimensions), V. tucanorum showed the smallest LA and the narrowest leaves (Table 1). For two-dimensional models, the degree of collinearity was tested, and VIF lied between 0.01 and 0.08 and T, between 100 and 12.5, indicating that L and W can be used without collinearity.
All models presented coefficient of determination (R 2) above 0.80, but most of the models also showed high values of MSE, RMSE, and PRESS. The model LA = −2.133 + 0.719 LW was selected because it presented the highest R 2 (0.99) and the lowest MSE, RMSE, and PRESS values (Table 2).
To validate the selected model, PLA and OLA of Q. cordata, Q. grandiflora, S. convallariodora, V. cinnamomea, and V. tucanorum were regressed. Correlation coefficients (R 2 > 0.98; P < 0.001) indicated a strong correlation between OLA and PLA for every species tested (Fig. 2). Differences between OLA and PLA were normally distributed for Q. cordata, Q. grandiflora, S. convallariodora, V. cinnamomea, and V. tucanorum. For all species, more than 97 % of these differences lied between the limits of agreement (difference ± 3 SD) (Fig. 3).
Discussion
To estimate LA, accepted models must possess coefficients of determination (R 2) higher than 0.95 (Williams and Martinson 2003). In the present study, we observed R 2 = 0.99 for the model we chose as presenting the best-fitted parameters. This R 2 value is in accordance with other best-fitted models developed to estimate leaf area in cerrado species [Styrax pohlii (LA = 0.582 + 0.683 LW, R 2 = 0.98) and S. ferrugineus (LA = –0.666 + 0.704 LW, R 2 = 0.97) (Souza and Habermann 2014) and Vernonia ferruginea (LA = 0.463 + 0.676 LW, R 2 = 0.96) (Souza and Amaral 2015)].
Low values of MSE, RMSE, and PRESS are also important to validate a model. Therefore, the model we selected to estimate LA of Vochysiaceae species not only possesses R 2 > 0.98 but also shows MSE, RMSE, and PRESS ranging between 10 and 30 % of those presented by the other models we tested (Table 2). These conditions are also critical for accepted best-fitted models to estimate LA in Vicia faba (Peksen 2007), Rosa hybrida (Rouphael et al. 2010), and Vernonia ferruginea Less. (Souza and Amaral 2015).
The best-fitted model we propose (LA = −2.133 + 0.719LW) is derived from a two-dimensional (LW × LA) regression. Models that were derived from a single-dimensional regression, such as LA = −41.992 + 6.889 L, exhibited the lowest R 2 (0.79), while those that were derived from two-dimensional regressions showed high R 2 values (Table 2). In fact, Souza and Amaral (2015) observed that models derived from single-dimensional regressions showed R 2 ≈ 0.40 (for L and L2) and R 2 ≈ 0.66 (for W and W2). These same authors demonstrated that models derived from two-dimensional regressions exhibited R 2 ≈ 0.96 (for LW) and 0.95 (for L2W2). On the other hand, when proposing the best-fitted model to estimate LA in chestnut plants (Serdar and Demirsoy 2006) and grapevines (Williams and Martinson 2003), these authors observed that the R 2 range exhibited by single- and two-dimensional derived models was not so large. Similar narrow R 2 range was observed when developing a model for V. ferruginea (Souza and Amaral 2015). The reason for such peculiarity in the models developed for these species might be due to the ratio between L and W, which can be considered an exception in these plants. In these cases, the lowest MSE, RMSE, and PRESS are critical to choose the best-fitted model.
Most of the models have been developed to estimate LA of single species (e.g., Pistia stratiotes (Carvalho et al. 2011a), Styrax pohlii A. DC., and Styrax ferrugineus Nees & Mart. (Souza and Habermann 2014), V. ferruginea (Souza and Amaral 2015)) and cultivars of the same species [e.g., Vicia faba (Peksen 2007), Zingiber officinale (Kandiannan et al. 2009), Rosa hybrida (Rouphael et al. 2010)]. In this paper, we developed a model for estimating LA of five Vochysiaceae species belonging to three different genera (Qualea, Salvertia, and Vochysia). Therefore, this is the first proposed model for estimating LA of multiple savanna woody species, especially in a group of Al-accumulating plants.
As Al accumulation is a trait that is fairly studied in these plants, and studies devoted to understand the function of Al in these species involve the investigation of the association of Al with sclerophyllous leaves, our model might be useful for future studies on the subject. For instance, Souza et al. (2015) noted significant variations in SLA between Al-accumulating and non-accumulating species but could not verify the direct influence of these plant functional groups on LA due to a lack of non-destructive models to use in the field. For similar reasons, leaves had to be sampled and digitized on a scanner when studying the influence of herbivory, nutrients, chemical defenses, and water status in an Al-accumulating species (Gonçalves-Alvim et al. 2006, 2011).
Therefore, the model we propose could be validated to estimate LA of Q. cordata, Q. grandiflora, S. convallariodora, V. cinnamomea, and V. tucanorum. The validation tests resulted in R 2 > 0.98, assuring that this model is accurate and can be used for estimating LA of these species in the field or in potted-plant experiments, using a ruler and a calculator. Consequently, future studies involving these (Al-accumulating) species may benefit from our LA model.
References
Ancy J, Jayachandran BK (1994) Leaf area measurement in ginger (Zingiber officinale R.). South Indian Hort 42:6–57
Barbosa AR, Yamamoto K, Valio IFM (1999) Effect of light and temperature on germination and early growth of Vochysia tucanorum Mart., Vochysiaceae, in cerrado and forest soil under different radiation levels. Rev Bras Bot 22:275–280
Bianco S, Bianco MS, Carvalho LB (2008) Estimativa da área foliar de Ageratum conyzoides usando dimensões lineares do limbo foliar. Acta Sci Agron 30:519–523
Blanco FF, Folegatti MV (2005) Estimation of leaf area for greenhouse cucumber by linear measurements under salinity and grafting. Sci Agric 62:305–309
Carnevale Neto F, Pilon AC, Silva DHS, Bolzani VS, Castro-Gamboa I (2011) Vochysiaceae: secondary metabolites, ethnopharmacology and pharmacological potential. Phytochem Rev 10:413–429
Carvalho SJP, Christoffoleti PJ (2007) Estimativa da área foliar de cinco espécies do gênero Amaranthus usando dimensões lineares do limbo foliar. Planta Dan 25:317–324
Carvalho LB, Bianco S, Galati VC, Panosso AR (2011a) Determination of Merremia cissoides leaf area based on linear measures of the leaflets. Acta Sci Agro 33:473–476
Carvalho LB, Souza MC, Bianco MS, Bianco S (2011b) Estimativa da área foliar de plantas daninhas de ambiente aquático: Pistia stratiotes. Planta Dan 29:65–68
Cavassan O, Cesar O, Martins FR (1984) Fitossociologia da vegetação arbórea da Reserva Estadual de Bauru, estado de São Paulo. Rev Bras Bot 7:91–106
Chabot BF, Hicks DJ (1982) The ecology of leaf life spans. Ann Rev Ecol Syst 13:229–259
Gill JL (1986) Outliers, residuals, and influence in multiple regression. J Anim Breed Gen 103:161–175
Giuffrida F, Rouphael Y, Toscano S, Scuderi D, Romano D, Rivera CM, Colla G, Leonardi C (2011) A simple model for nondestructive leaf area estimation in bedding plants. Photosynthetica 49:380–388
Gonçalves-Alvim SJ, Korndorf G, Fernandes GW (2006) Sclerophylly in Qualea parviflora (Vochysiaceae): influence of herbivory, mineral nutrients, and water status. Plant Ecol 187:153–162
Gonçalves-Alvin SJ, Lana TC, Ranieri BD, Fernandes GW (2011) Test of hypotheses about herbivory and chemical defences of Qualea parviflora (Vochysiaceae) in Brazilian Cerrado. Braz J Bot 34:223–230
Haridasan M (1982) Aluminium accumulation by some cerrado native species of central Brazil. Plant Soil 65:265–273
Haridasan M (2008) Nutritional adaptations of native plants of the cerrado biome in acid soils. Rev Bras Fisi Veg 20:183–195
Haridasan M, Araújo GM (1988) Aluminium accumulating species in two forest communities in the cerrado region of central Brazil. For Ecol Manag 24:15–26
Kandiannan K, Parthasarathy U, Krishnamurthy KS, Thankamani CK, Srinivasan V (2009) Modeling individual leaf area of ginger (Zingiber officinale Roscoe) using leaf length and width. Scien Hort 120:532–537
Kissmann C, Veiga EB, Eichemberg MT, Habermann G (2014) Morphological effects of flooding on Styrax pohlii and the dynamics of physiological responses during flooding and post-flooding conditions. Aqua Bot 119:7–14
Lusk CH, Reich PB, Montgomery RA, Ackerly DD, Cavender-Bares J (2008) Why are evergreen leaves so contrary about shade? Trends Ecol Evol 23:299–303
Marquardt DW (1970) Generalized inverse, ridge regression, biased linear estimation, and nonlinear estimation. Technometrics 12:591–612
Medeiros RA, Haridasan M (1985) Seasonal variations in the foliar concentrations of nutrients in some aluminium accumulating plants of the cerrado region of central Brazil. Plant Soil 88:433–436
Norman JM, Campbell GS (1989) In: Pearcy RW, Ehleringer JR, Mooney HA, Rundel PW (eds) Canopy structure plant physiological ecology: field methods and instrumentation. Chapman and Hall, London, pp 301–325
Paulilo MTS, Felippe GM, Dale JE (1993) Crescimento inicial de Qualea grandiflora. Rev Bras Bot 16:37–46
Peksen E (2007) Non-destructive leaf area estimation model for faba bean (Vicia faba L.). Sci Hort 113:322–328
Pinheiro MHO, Monteiro R (2009) Análise estrutural e considerações sobre a dinâmica sucessional de dois fragmentos florestais semideciduais do Jardim Botânico Municipal de Bauru, SP, Brasil. Acta Bot Bras 23:968–975
Rouphael Y, Mouneimne AH, Ismail A, Mendonza-de-Gyves E, Rivera CM, Colla G (2010) Modeling individual leaf area of rose (Rosa hybrida L.) based on leaf length and width measurement. Photosynthetica 48:9–15
Sajo MG, Rudall PJ (2002) Leaf and stem anatomy of Vochysiaceae in relation to subfamilial and suprafamilial systematic. Bot J Linn Soc 138:339–364
Serdar U, Demirsoy H (2006) Non-destructive leaf area estimation in chestnut. Sci Hort 108:227–230
Simon MF, Grether R, Queiroz LP, Skema C, Pennington RT, Hughes CE (2009) Recent assembly of the Cerrado, a neotropical plant diversity hotspot, by in situ evolution of adaptations to fire. PNAS 106:20359–20364
Souza MC, Amaral CL (2015) Non-destructive linear model for leaf area estimation in Vernonia ferruginea Less. Braz J Biol 75:152–156
Souza MC, Habermann G (2014) Non-destructive equations to estimate leaf area of Styrax pohlii and Styrax ferrugineus. Braz J Biol 74:222–225
Souza MC, Bueno PCP, Morellato LPC, Habermann G (2015) Ecological strategies of Al-accumulating and non-accumulating functional groups from the cerrado sensu stricto. An Acad Bras Cienc 87:813–823
Williams L, Martinson TE (2003) Nondestructive leaf area estimation of ‘Niagara’ and ‘DeChaunac’ grapevines. Sci Hort 98:493–498
Acknowledgments
We acknowledge the São Paulo Research Foundation (FAPESP) for a Post-Doc fellowship to MCS (Grant #2013/21293-6) and a Ph.D. fellowship to CLA (Grant #2012/25298-0). GH acknowledges the Brazilian National Council for Scientific and Technological Development (CNPq) for a Research Productivity fellowship (Grant #308902/2014-9). The authors also acknowledge to the Jardim Botânico Municipal de Bauru.
Author information
Authors and Affiliations
Corresponding author
Rights and permissions
About this article
Cite this article
de Souza, M.C., do Amaral, C.L., Habermann, G. et al. Non-destructive model to estimate the leaf area of multiple Vochysiaceae species. Braz. J. Bot 38, 903–909 (2015). https://doi.org/10.1007/s40415-015-0176-4
Received:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s40415-015-0176-4