Abstract
Obesity is a multifactorial disease caused by the interaction of genetic and environmental factors related to lifestyle aspects. It has been shown that reduced sleep is associated with increased body mass index (BMI). Circadian Locomotor Output Cycles Kaput (CLOCK) gene variants have also been associated with obesity. The objective of this mini-review was to discuss the available literature related to CLOCK gene variants associated with adiposity and sleep duration in humans. In total, 16 articles complied with the terms of the search that reported CLOCK variants associated with sleep duration, energy intake, and BMI. Overall, six CLOCK single nucleotide polymorphisms (SNPs) have been associated with sleep duration, and three variants have been associated with energy intake variables. Overall, the most studied area has been the association of CLOCK gene with obesity; close to eight common variants have been associated with obesity. The most studied CLOCK SNP in different populations is rs1801260, and most of these populations correspond to European populations. Collectively, identifying at risk CLOCK genotypes is a new area of research that may help identify individuals who are more susceptible to overeating and gaining weight when exposed to short sleep durations.
Similar content being viewed by others
Avoid common mistakes on your manuscript.
Introduction
Obesity is a multifactorial disease caused by an interaction between genetic and environmental factors. Negative consequences of obesity have been linked to a variety of chronic diseases, including type 2 diabetes, hypertension, cardiovascular pathologies, and different forms of cancer [6]. Among the behavioral factors that can cause obesity, insufficient sleep (short sleep duration and/or poor sleep quality) depends on the light-dark cycle (circadian rhythm) and is gaining attention in the literature. Sleep disturbances can alter brain functions involved in the control of appetite, which can generate overeating in the current obesogenic environment [3–5]. Genetic studies on obesity have described more than 600 genes, genetic markers, or chromosomal regions that have been linked to obesity [24]. Of them, the Circadian Locomotor Output Cycles Kaput (CLOCK) gene participates in the regulation of circadian rhythms as a transcription factor [7]. There is extensive literature showing how sleep reduction is associated with the development of obesity [3, 5, 16]. However, studies evaluating how genetics predisposes a person to obesity when sleep is reduced and how this modulates eating behavior are lacking.
The objective of this paper was to briefly review the studies examining the association between genetic variants of the CLOCK gene with obesity and sleep by focusing on aspects of adiposity, metabolic syndrome, eating behavior, and sleep duration. There is sufficient literature reviewing the associations among insufficient sleep, energy intake, and obesity. However, it remains unclear how a reduction in the hours of sleep affects homeostatic and non-homeostatic food intake and how it is associated with CLOCK polymorphisms and the susceptibility to obesity across different ethnic populations. We focused on cross-sectional studies that measured CLOCK polymorphisms associated with body mass index (BMI), weight loss interventions, and energy intake. The novel contribution of this paper is that it highlights the findings on the role of genetic factors in such relations and provides research avenues for future investigations.
Methods
The literature search was based on the following terms associated with the objective of this article: genetic variants or polymorphisms of the CLOCK gene (including the most studied variants), eating behavior, energy/food intake, obesity, BMI, weight, waist circumference, waist-to-hip ratio, body fat, adiposity, overweight, fat mass, metabolic syndrome, and sleep (including sleep duration, sleep deprivation, and insufficient sleep). We also considered mostly cross-sectional frequency studies from different populations (age, sex, and ethnicities) and sample sizes. Meta-analyses and CLOCK SNP (single nucleotide polymorphism) allele and genotype frequencies were analyzed. Studies that involved subjects with mental disorders and those that were performed under stressful conditions were not considered. The search was restricted to human studies. All of the studies reviewed had the full text, and the assessment of inclusion criteria in this review was independently performed by two co-authors of this study (MV and AMO).
Results
A total of 16 articles fully complied with the terms of the search (Table 1). The articles reported associations between CLOCK gene variants and (1) sleep duration, (2) BMI or metabolic syndrome, and (3) eating behavior, mostly related to energy intake. Given that sleep duration is related to factors associated with obesity, such as food intake, it is difficult to divide the latter into two variables, and in several articles, they are discussed together. Below, we present the most relevant aspects of the articles studying the abovementioned areas.
Associations between sleep duration and CLOCK gene variants
CLOCK gene variants have been reported to modify the association between sleep duration and energy intake in several studies. The meta-analysis by Allebrandt et al. [1] showed that sleep duration was lower in subjects carrying the A allele of the rs12649507 SNP. An additional significant interaction was observed between sleep duration and the rs12649507 CLOCK polymorphism on polyunsaturated fatty acids (PUFA) intake; the carriers of the A minor allele had a longer sleep duration with increased PUFA intake. The carriers with the minor allele (G) had a shorter sleep duration [4]. Additionally, sleep duration and rs6858749 were related to protein intake, with carriers of the minor allele (T) reporting lower protein intake with each additional hour of sleep [4]. Both studies suggested that more hours of sleep might act as a protective factor against the genetic predisposition to develop obesity from the CLOCK polymorphism [1, 4]. These two studies included an analysis of a large sample size to investigate the associations of CLOCK and its interactions with sleep duration and dietary intake. However, they only included a European population, and sleep was self-reported. Thus, including other populations and objective methods of measuring sleep is necessary for future studies. On the other hand, in European populations, the CLOCK variants rs11932595 and rs6843722 showed no association with sleep duration (self-reported) in three independent cohorts [19]; however, Allebrandt’s study showed that carriers with a homozygous AA in the rs11932595 variant had reduced sleep duration.
Screening the entire coding CLOCK region in subjects with delayed sleep phase syndrome and non-24-h sleep-wake syndrome showed that CLOCK polymorphisms are unlikely to play an important role in the development of these syndromes [17]. This study is the only CLOCK-wide association study related with a disease. More studies are needed to amplify the coding region of the CLOCK gene in different populations and to link it with other pathologies, such as obesity, involved with CLOCK functions. The Iwase et al. [17] study is interesting because it is the only one in which the entire CLOCK coding region has been analyzed to find new polymorphisms or mutations, and it should be an interesting study to replicate in populations of obese people.
Collectively, there is an absence of studies that measure the association between CLOCK gene variants and sleep duration in different populations, especially using an objective assessment of sleep, such as actigraphy. Additionally, it would be relevant to investigate the frequency of CLOCK gene variants in different populations and associate these frequencies with the amount of sleep in free-living conditions. It is also very important to investigate how CLOCK variants predispose a person to developing obesity when they are exposed to environmental conditions, such as reduced sleep. This concept is especially important in today’s society in which many people are sleep deprived [20, 29].
Associations of CLOCK variants with BMI and metabolic syndrome
There are pathways that connect the central nervous system (CNS) and peripheral tissues, which allow the CNS to activate or silence peripheral tissues at different times of the day. Thus, an imbalance between the rhythms of different fat compartments differentially controlled by the autonomous nervous system and in turn by the CNS may be a possible cause of the metabolic syndrome [18]. Related to this, CLOCK polymorphisms have been described and associated with obesity or eating behavior traits. The variant 3111T > C (rs1801260) in conjunction with a specific haplotype (a combination of alleles at different loci on a chromosome that are transmitted together) has been associated with obesity and metabolic syndrome in different populations [8, 10, 11, 25]. It was determined that carriers of the C minor allele of the rs1801260 polymorphism were more resistant to weight loss than individuals with TT [11, 12]. Additionally, overweight/obese individuals carrying the CC rs1801260 genotype had significantly higher BMI values compared to those carrying the CT or TT genotypes [22]. Moreover, in the same study, obese class III individuals had a significantly higher frequency of both the CC genotype and the C allele compared to individuals with a BMI <40 kg/m2. Additionally, the TT genotype of rs1801260 showed lower plasma insulin and insulin resistance, as well as higher insulin sensitivity, after 12 months of diet intervention [13]. Additionally, C carriers of rs1801260 were associated with an evening chronotype, which was also related to an obesity phenotype [2, 21]. However, the rs1801260 variant was not significantly associated with being overweight or with sleep duration in children [14].
In addition, the CLOCK polymorphisms rs1554483, rs6843722, rs6850524, and rs4864548 have been associated with overweight and obesity in an adult population [26], showing that carriers of haplotypes rs1554483-G and rs4864548-A have a 1.5 times (confidence interval (CI): 1.31, 2.54) greater risk of becoming overweight or obese. In another study, carriers of haplotype CGC (rs4864548, rs3736544, and rs1801260) were protected against the development of overweight and obesity, supporting the hypothesis that genetic variations of the CLOCK gene may play an important role in the development of metabolic syndrome, type 2 diabetes, and cardiovascular disease [25].
The observations found between the rs1801260 variant, obesity, and certain features of eating behavior can be explained by the fact that this polymorphism produces changes in the stability and half-life of mRNA, which influences mRNA translocation. Therefore, CLOCK protein levels affect circadian clock organization, sleep duration, and, consequently, eating behavior traits [17].
Eating behavior associated with genetic variants of CLOCK gene
One explanation of the relationship between CLOCK gene and obesity is that this gene regulates aspects of energy intake. In the case of the variant rs3749474, carriers of the minor T allele reported significantly higher energy intake than non-carrier subjects [8], which is concordant with a study by Garaulet et al. [9]. For rs4580704, the carriers of the minor C allele reported the lowest values of energy intake after adjusting for sex, age, family relationships, and BMI [8]. However, the authors did not achieve statistical significance with the rs1801260 SNP. Consistent with this, the homozygotes CC displayed a significant increase in HDL/apolipoprotein A1 ratio under a low fat diet [15]. These results show an association between SNP rs4580704 with energy intake aspects.
There is a definite lack of studies that associate CLOCK variants with different eating behavior traits, which could be assessed using validated questionnaires. For example, eating behavior traits measured with the Three-Factor Eating Questionnaire (TFEQ) have been previously associated with the MC4R, MC3R, LEP, and LEPR genes [23, 27, 28]. The role of CLOCK genetic variants on the association between insufficient sleep and obesity is summarized in Fig. 1.
Differences found in the same variant in different populations may be due to a linkage disequilibrium or the frequency of the genotypes in each population. Additionally, these differences may be due to the contribution of other variants of the same gene or other genes in different populations or a heterogeneity of phenotypes in which the number of subjects tested is not representative of the distribution of sleep duration.
Conclusion
There are some CLOCK variants that are related with obesity and short sleep duration. However, this type of research needs to be performed in other populations in which other genetic variants could be identified. Identifying at risk CLOCK genotypes is a new area of study with potential relevance for establishing sleep duration and eating behavior requirements to help with the prevention and treatment of obesity.
References
Allebrandt KV, Teder-Laving M, Akyol M, Pichler I, Müller-Myhsok B, Pramstaller P et al (2010) CLOCK gene variants associate with sleep duration in two independent populations. Biol Psychiatry 67:1040–1047
Bandín C, Martinez-Nicolas A, Ordovás JM, Ros Lucas JA, Castell P, Silvente T et al (2013) Differences in circadian rhythmicity in CLOCK 3111T/C genetic variants in moderate obese women as assessed by thermometry, actimetry and body position. Int J Obes (Lond) 37:1044–1150
Cappuccio FP, D’Elia L, Strazzullo P, Miller MA (2010) Sleep duration and all-cause mortality: a systematic review and meta-analysis of prospective studies. Sleep 33:585–592
Dashti HS, Follis JL, Smith CE, Tanaka T, Cade BE, Gottlieb DJ et al (2015) Habitual sleep duration is associated with BMI and macronutrient intake and may be modified by CLOCK genetic variants. Am J Clin Nutr 101:135–143
Dean E, Bloom A, Cirillo M, Hong Q, Jawl B, Jukes J, Nijjar M et al (2012) Association between habitual sleep duration and blood pressure and clinical implications: a systematic review. Blood Press 21:45–57
Friedman JM (2000) Obesity in the new millennium. Nature 404:632–634
Froy O (2010) Metabolism and circadian rhythms—implications for obesity. Endocr Rev 31:1–24
Garaulet M, Lee YC, Shen J, Parnell LD, Arnett DK, Tsai MY et al (2009) CLOCK genetic variation and metabolic syndrome risk: modulation by monounsaturated fatty acids. Am J Clin Nutr 90:1466–1475
Garaulet M, Lee YC, Shen J, Parnell LD, Arnett DK, Tsai MY et al (2010) Genetic variants in human CLOCK associate with total energy intake and cytokine sleep factors in overweight subjects (GOLDN population). Eur J Hum Genet 18:364–369
Garaulet M, Corbalán MD, Madrid JA, Morales E, Baraza JC, Lee YC et al (2010) CLOCK gene is implicated in weight reduction in obese patients participating in a dietary programme based on the Mediterranean diet. Int J Obes (Lond) 34:516–523
Garaulet M, Sánchez-Moreno C, Smith CE, Lee YC, Nicolás F, Ordovás JM (2011) Ghrelin, sleep reduction and evening preference: relationships to CLOCK 3111 T/C SNP and weight loss. PLoS One 6:1–7
Garaulet M, Tardido A, Lee YC, Smith CE, Parnell LD, Ordovás JM (2012) SIRT1 and CLOCK 3111T > C combined genotype is associated with evening preference and weight loss resistance in a behavioral therapy treatment for obesity. Int J Obes (Lond) 36:1436–1441
Garcia-Rios A, Gomez-Delgado FJ, Garaulet M, Alcala-Diaz JF, Delgado-Lista FJ, Marin C (2014) Beneficial effect of CLOCK gene polymorphism rs1801260 in combination with low-fat diet on insulin metabolism in the patients with metabolic syndrome. Chronobiol Int 31:401–408
Giovaninni NP, Fuly JT, Moraes LI, Coutinho TN, Trarbach EB, Jorge AA et al (2014) Study of the association between 3111T/C polymorphism of the CLOCK gene and the presence of overweight in schoolchildren. J Pediatr (Rio J) 90:500–505
Gomez-Delgado F, Garcia-Rios A, Alcala-Diaz JF, Rangel-Zuñiga O, Delgado-Lista J, Yubero-Serrano EM et al. (2015) Chronic consumption of a low-fat diet improves cardiometabolic risk factors according to the CLOCK gene in patients with coronary heart disease. Mol Nutr Food Res:1–9
Guo X, Zheng L, Wang J, Zhang X, Zhang X, Li J, Sun Y (2013) Epidemiological evidence for the link between sleep duration and high blood pressure: a systematic review and meta-analysis. Sleep Med 14:324–332
Iwase T, Kajimura N, Uchiyama M, Ebisawa T, Yoshimura K, Kamei Y et al (2002) Mutation screening of the human Clock gene in circadian rhythm sleep disorders. Psychiatry Res 109:121–128
Kreier F, Kalsbeek A, Ruiter M, Yilmaz A, Romijn JA, Sauerwein HP et al (2003) Central nervous determination of food storage—a daily switch from conservation to expenditure: implications for the metabolic syndrome. Eur J Pharmacol 480:51–65
Lane JM, Tare A, Cade BE, Chen TH, Punjabi NM, Gottlieb DJ et al (2013) Common variants in CLOCK are not associated with measures of sleep duration in people of European ancestry from the Sleep Heart Health Study. Biol Psychiatry 15:33–35
Matricciani L, Olds T, Petkov J (2012) In search of lost sleep: secular trends in the sleep time of school-aged children and adolescents. Sleep Med Rev 16:203–211
Mishima K, Tozawa T, Satoh K, Saitoh H, Mishima Y (2005) The 3111T/C polymorphism of hClock is associated with evening preference and delayed sleep timing in a Japanese population sample. Am J Med Genet B Neuropsychiatr Genet 133:101–104
Monteleone P, Tortorella A, Docimo L, Maldonato MN, Canestrelli B, De Luca L, Maj M (2008) Investigation of 3111T/C polymorphism of the CLOCK gene in obese individuals with or without binge eating disorder: association with higher body mass index. Neurosci Lett 11:30–33
Obregón AM, Amador P, Valladares M, Weisstaub G, Burrows R, Santos JL (2010) Melanocortin-3 receptor gene variants: association with childhood obesity and eating behavior in Chilean families. Nutrition 26:760–765
Rankinen T, Bouchard C (2006) Genetics of food intake and eating behavior phenotypes in humans. Annu Rev Nutr 26:413–434
Scott EM, Carter AM, Grant PJ (2008) Association between polymorphisms in the Clock gene, obesity and the metabolic syndrome in man. Int J Obes (Lond) 32:658–662
Sookoian S, Gemma C, Gianotti TF, Burgueño A, Castaño G, Pirola CJ (2008) Genetic variants of Clock transcription factor are associated with individual susceptibility to obesity. Am J Clin Nutr 87:1606–1615
Valladares M, Domínguez-Vásquez P, Obregón AM, Weisstaub G, Burrows R, Maiz A et al (2010) Melanocortin-4 receptor gene variants in Chilean families: association with childhood obesity and eating behavior. Nutr Neurosci 13:71–78
Valladares M, Obregón AM, Weisstaub G, Burrows R, Patiño A, Ho-Urriola J et al (2015) Association between feeding behavior, and genetic polymorphism of leptin and its receptor in obese Chilean children. Nutr Hosp 31:1044–1051
WB&A Market Research: National Sleep Foundation. Sleep in America poll. Washington DC: National Sleep Foundation 2002. Available via DIALOG. http://www.sleepfoundation.org/article/sleep-america-polls/2002-adult-sleep-habits. Accessed 10 June 2015
Acknowledgments
This work was supported by Fondecyt de Inicio 11130200.
Author information
Authors and Affiliations
Corresponding author
Rights and permissions
About this article
Cite this article
Valladares, M., Obregón, A.M. & Chaput, JP. Association between genetic variants of the clock gene and obesity and sleep duration. J Physiol Biochem 71, 855–860 (2015). https://doi.org/10.1007/s13105-015-0447-3
Received:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s13105-015-0447-3