Abstract
Background
Ocular adnexal B cell lymphoma is the most common orbital malignancy in adults. Large chromosomal translocations and alterations in cell-signaling pathways were frequently reported in lymphomas. Among the altered pathways, perturbations of NFκB signaling play a significant role in lymphomagenesis. Specifically, the MYD88 L265P mutation, an activator of NFκB signaling, is extensively studied in intraocular lymphoma but not at other sites. Therefore, this study aims to screen the MYD88 L265P mutation in Ocular adnexal B cell lymphoma tumors and assess its clinical significance.
Methods and results
Our study of twenty Ocular adnexal B cell lymphoma tumor samples by Allele-Specific Polymerase Chain Reaction identified two samples positive for the MYD88 L265P mutation. Subsequent Sanger sequencing confirmed the presence of the heterozygous mutation in those two samples tested positive in Allele-Specific Polymerase Chain Reaction. A comprehensive review of MYD88 L265P mutation in Ocular adnexal B cell lymphoma revealed variable frequencies, ranging from 0 to 36%. The clinical, pathological, and prognostic features showed no differences between patients with and without the MYD88 L265P mutation.
Conclusion
The present study indicates that the MYD88 L265P mutation is relatively infrequent in our cohort, underscoring the need for further validation in additional cohorts.
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Introduction
Ocular Adnexal Lymphoma (OAL) is the common primary orbital malignancy in adults, comprising about 1% of all non-Hodgkin’s Lymphoma (NHL) and 8% of extranodal lymphomas [1, 2]. Various studies emphasize the significant involvement of NFκB pathway activation in tumorigenesis. A prominent activator within this pathway is the Myeloid differentiation primary response gene 88 (MYD88), situated at chromosome 3p22. MYD88 functions as an adapter protein, serving as a pivotal molecule in the activation of NF-κB signaling through both Bruton’s tyrosine kinase (BTK) and Interleukin-1 Receptor Associated Kinases pathways [3]. Specifically, a hotspot gain of function mutation at amino acid position 265 (affecting Toll/interleukin-1receptor domain (TIR)), where a leucine to proline substitution (L265P) was shown to enhance NF-κB pathway activation, JAK-STAT signaling significantly and promotes lymphoma cell survival [4, 5]. Studies have highlighted the diagnostic and prognostic significance of MYD88 in various B-cell malignancies. Particularly the MYD88 L265P mutation is frequently reported in Waldenstrom macroglobulinemia /lymphoplasmacytic lymphoma patients. This mutation is also associated with other conditions, including primary central nervous system lymphoma, vitreoretinal lymphoma, chronic lymphocytic leukemia, splenic marginal zone lymphoma and immunoglobulin M (IgM) monoclonal gammopathy [6, 7]. Notably, the high prevalence of MYD88 L265P mutation in primary cutaneous diffuse large cell lymphoma (DLBCL) shows its association with poor prognosis and shorter survival [8, 9]. Knowing its role in lymphomagenesis, Weber et al. suggested the oncogenic MYD88 L265P mutation as a potential therapeutic target in B-cell NHLs [10]. Patients with MYD88 L265P mutation showed a favourable clinical course with a higher response rate to BTK inhibitors [11]. However, the clinical impact and prognostic value of MYD88 mutations vary significantly among different lymphoproliferative disorders and anatomical sites [3]. Thus, this study aims to assess the prevalence of MYD88 L265P mutations in OABL and its clinical significance.
Materials and methods
Samples
Tumor samples were collected for analysis after obtaining informed consent from the patients. This work was done with approval of the Institutional Ethics Committee (IRB2018014BAS), following the tenets of the Declaration of Helsinki. Clinical records were reviewed to retrieve the following data: age and sex of the patient, symptoms, laterality and extent of ocular adnexal involvement. Tumor sections were stained with Hematoxylin & Eosin and subjected to immunohistochemical analysis using CD45, CD20, and CD3 markers. Fresh frozen tumors diagnosed with OABL were included for genetic analysis.
Allele specific-PCR for MYD88 L265P investigation
Genomic DNA was extracted from OABL tumor samples using Qiagen DNA mini-Kit (Qiagen, USA), following the manufacturer’s protocols. The purity and yield of the extracted DNA was determined using a NanoDrop™ Lite Plus spectrophotometer (Thermo Scientific, USA). Allele specific PCR (AS-PCR) was carried out with primers specified in Table 1. The 10 ul reaction was set up with, 1X PCR buffer, 50 µM of dNTPs, 0.5 U Taq DNA polymerase, 4 µM of each primer and 20 ng of DNA. Thermal cycling conditions comprised an initial denaturation of 5 min at 94 °C followed by 30 cycles of 30 s at 94 °C, 15 s at 58 °C, and 60 s at 72 °C followed by a final extension of 7 min at 72 °C. Appropriate positive and negative controls were included in each run. The amplified products were checked in 1.5% agarose gel using ethidium bromide under UV light. The sensitivity of the AS-PCR assay was assessed by serial dilution of DNA isolated from the mutation positive tumor which is heterozygous for MYD88 L265P, with DNA from the SUDHL-6 cell line harboring wild-type MYD88.
Confirmatory sanger sequencing
PCR was conducted with all tumor samples to amplify the region flanking the MYD88 L265P mutation following the reaction composition described above with primers detailed in Table 1. Thermal cycles were initial denaturation of 5 min at 94 °C followed by 40 cycles of 30 s at 94 °C, 30 s at 58 °C, and 60 s at 72 °C followed by a final extension of 7 min at 72 °C. The resulting amplicons were purified using ExoSAP-IT™. Cycle sequencing was performed with the amplified PCR products using Big Dye Terminator v3.1 cycle sequencing kit using the reverse PCR primer. Sequencing of the purified products was carried out using the Applied Biosystems 3500 Genetic Analyzer.
Results
Twenty histologically confirmed OABL tumor samples were analyzed, comprising 12 males (60%) and 8 females (40%). The mean age at diagnosis was 61.10 ± 5.83 years, with ages ranging from 30 to 85 years. Among the 20 OABL patients, 95% (n = 19) presented with unilateral disease, while 5% (n = 1) exhibited bilateral involvement. The predominant symptoms at presentation were proptosis and swelling. The predominant site of tumor was orbit (including lacrimal gland) (n = 16). Superior quadrant of the orbit was primarily involved (n = 9), followed by the inferior quadrant (n = 4) and both quadrants of the orbit (n = 3). Apart from the orbit, involvement of eyelid (n = 2) and conjunctiva (n = 2) was also observed. In all cases, the tumor lesions were localized, and all instances were identified as primary OABL.
Two out of twenty OABL (10%) were positive for MYD88 L265P mutations in AS-PCR, whereas the remaining 18 (90%) cases were negative and showed wild-type MYD88. Subsequent Sanger sequencing of mutation flanking regions confirmed the presence of the heterozygous L265P mutation, characterized by a leucine-to-proline substitution at position 265, where T (wild type) was replaced by C (mutant) (Fig. 1). AS-PCR and Sanger sequencing showed a concordant MYD88 profile across all 20 tumor samples (ESM_1). AS-PCR enables the reproducible detection of mutant DNA at concentrations as low as 1% (Fig. 2). Notably both the samples harbouring MYD88 L265P mutation had tumor lesions located in the superior orbital quadrant. Other Clinical and histological features of OABL did not differ among the patients with and without MYD88 L265P mutation. Furthermore, no correlation was observed between the presence of the mutation and patient prognosis or therapeutic response.
Discussion
Frequency of MYD88 L265P in ocular adnexal B cell lymphoma
The present study aimed to investigate the presence of MYD88 L265P in OABL tumors and it is the first report from India. Intriguingly, our AS-PCR and Sanger sequencing analyses found positivity only in two (10%) samples. The mutational patterns of MYD88 L265P in OABL showed their prevalence, ranging from 0 to 36% (Table 2). Our finding is concordant with Vela et al. and Zhao et al. who reported a comparable frequency of the MYD88 L265P mutation at 9% using targeted high-throughput sequencing and 10% via whole exome sequencing, respectively. [12, 13].
However, few studies have reported a higher prevalence of MYD88 L265P mutation in OABL. Behdad et al. employed allele-specific real-time PCR for MYD88 L265P mutation and detected positivity in 8 out of 22 primary ocular adnexal marginal zone lymphoma (36%) [14]. Similarly, Kirkegaard et al. identified MYD88 L265P mutations in 8 out of 34 lymphomas (29%) using AS-PCR and Sanger sequencing. The study also showed poorer progression-free survival in mutants compared to wild-type cases [15]. However, the present study did not observe any correlation between mutants and patient survival. MYD88 TIR domain mutations were frequently reported in DLBCL (71%) and marginal zone lymphoma (MZL) (25%) subtypes of orbital and ocular adnexal lymphomas. Specifically, L265P mutations were identified in 43% of DLBCL and 15% of MZL in OABL [16]. In our study cohort, the subtyping was not performed in these tumor samples due to inadequacy of sample.
Certain studies have also enunciated the MYD88 mutation in Mucosa associated lymphoid tissue lymphoma (MALT) across different anatomical locations. A targeted next-generation study of MALT from different sites revealed MYD88 mutation present only in 20% of Orbital/adnexal MALT and 7.9% of salivary gland tumors comparing other MALT sites. Notably, the L265P mutation accounts for approximately 10% of all MYD88 mutations identified. [17]. Similarly, a recent meta-analysis of 1663 marginal zone B-cell lymphomas from various origins revealed that MYD88 mutations were specifically identified in ocular marginal zone lymphoma, constituting 10% of cases [18]. In an intriguing observation, among 53 cases of MALT lymphoma, only three instances exhibited MYD88 mutation. Notably, two cases with L265P substitution manifested lymphoma involving the orbital adnexa [19]. Another comparative study by Moody et al., on MALT from different anatomical sites, highlighted that the MYD88 mutation is notably distinct in ocular adnexa (7%) and salivary glands [20]. In the present study, MYD88 L265P mutation was identified in patients with tumors located in the superior quadrant of the orbit.
Several groups utilized different approaches to investigate MYD88 mutation in OABL. A large cohort study involving 105 cases of ocular adnexal MALT lymphoma, PCR and Sanger revealed MYD88 mutation in 3 out of 105 (3%) cases [21]. Subsequently, the same group employed targeted sequencing on ocular adnexal cases, reaffirming the presence of the MYD88 mutation in 3% of cases [22]. Another independent investigation focused on MYD88 in Chlamydia negative MALT cases, revealed that 3 out of 45 (6.7%) harbored L265P mutations as detected by Sanger sequencing [23]. Magistri et al. conducted whole exome sequencing and found that 12% of ocular adnexal MALT exhibited MYD88 mutations, with only one patient displaying L265P variant [24].
Johansson et al. conducted amplicon sequencing on genes recurrently mutated in the NFκB pathway across 63 formalin fixed tumor samples and revealed MYD88 mutation in 19% of the samples, of which 13% are L265P variants [25]. Ironically, the same group reported no MYD88 mutation in 13 fresh ocular adnexal MZL by whole genome and exome sequencing [26]. Similarly, Liu et al. showed no genetic alteration in MYD88 L265P by Sanger sequencing in OABL [27]. Similarly, a comprehensive MYD88 (L265P) somatic mutational profiling in 21 MALT samples including orbit showed no mutation [28]. Moreover, a whole genome study displayed only 4% of cases exhibited MYD88 mutations, albeit not the L265P variant [29]. Despite the varied methodologies employed, the majority of the study outcomes align with our findings.
Conclusion
Molecular analyses showed that the MYD88 L265P mutation was not highly frequent in our cohort. AS-PCR stands out as an efficient method for directly detecting point mutations by analysing the PCR product which detects mutants at relatively low tumor loads. A systemic review reveals that the MYD88 L265P mutation ranges from 0 to 36%. We acknowledge that the present study is limited by its design, lack of lymphoma subtyping and relatively small sample size, given the rarity of the disease. A larger, multicenter cohort is required to validate this analysis.
Data availability
The data supporting this study's findings are available on request from the corresponding author.
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Acknowledgements
We acknowledge Lady Tata Memorial Trust-Mumbai, India for providing Junior and Senior Research Scholarship to Karuvel Kannan Saraswathi.
Funding
This work was supported by Aravind Eye Foundation, USA.
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Conception or design of the work: AV, RS, KKS; Acquisition, analysis, or interpretation of data: KKS; Drafting of the manuscript: KKS, AV; Critical revision of the manuscript for important intellectual content: AV, RS, UK. All the authors approved the final version of the manuscript.
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This work was done with approval from the Institutional Ethics Committee (IRB2018014BAS) and followed the tenets of the Declaration of Helsinki.
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Supplementary file1 (JPG 1530 KB)
ESM_1: Confirmatory Sanger sequencing of the MYD88 L265P mutation in tumors shows wild-type MYD88 profile.
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Saraswathi, K.K., Santhi, R., Kim, U. et al. Investigating the frequency of somatic MYD88 L265P mutation in primary ocular adnexal B cell lymphoma. Mol Biol Rep 51, 973 (2024). https://doi.org/10.1007/s11033-024-09903-w
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DOI: https://doi.org/10.1007/s11033-024-09903-w