Abstract
Clonorchis sinensis triosephosphate isomerase (CsTIM) is a key regulatory enzyme of glycolysis and gluconeogenesis, which catalyzes the interconversion of glyceraldehyde 3-phosphate to dihydroxyacetone phosphate. In this study, the biochemical characterizations of CsTIM have been examined. A full-length complementary DNA (cDNA; Cs105350) sequence encoding CsTIM was obtained from our C. sinensis cDNA library. The open reading frame of CsTIM contains 759 bp which encodes 252 amino acids. The amino acid sequence of CsTIM shares 60–65 % identity with other species. Western blot analysis displayed that recombinant CsTIM (rCsTIM) can be probed by anti-rCsTIM rat serum and anti-C. sinensis excretory/secretory products (anti-CsESPs) rat serum. Quantitative reverse transcription (RT)-PCR and western blotting analysis revealed that CsTIM messenger RNA (mRNA) and protein were differentially expressed in development cycle stages of the parasite, including adult worm, metacercaria, excysted metacercaria, and egg. In addition, immunolocalization assay showed that CsTIM was located in the seminal vesicle, eggs, and testicle. Moreover, rCsTIM exhibited active enzyme activity in catalytic reactions. The Michaelis constant (K m) of rCsTIM was 0.33 mM, when using glyceraldehyde 3-phosphate as the substrate. The optimal temperature and pH of CsTIM were 37 °C and 7.5–9.5, respectively. Collectively, these results suggest that CsTIM is an important protein involved in glycometabolism, and CsTIM possibly take part in many biological functions in the growth and development of C. sinensis.
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Introduction
Clonorchis sinensis (Cl. sinensis) causes clonorchiasis, which is an important food-borne parasite disease distributed in Southeast Asia, Korea, and Vietnam. It is estimated to infect approximately 35 million people worldwide, among which 15 million people are in China (Lun et al. 2005; Young et al. 2010). People are infected by Cl. sinensis by eating raw or undercooked freshwater fish containing infective Cl. sinensis metacercariae. After entering the duodenum, Cl. sinensis metacercariae become juvenile flukes and then grow into adult worms (Keiser and Utzinger 2009). Cl. sinensis infection causes clonorchiasis with the outcomes of cholecystitis, cholangectasis, cholelithiasis, and hepatic fibrosis (Choi et al. 2004; Lim et al. 2006) and is suggested to be associated with promotion of cholangiocarcinoma (Shin et al. 2010). However, there are still few effective measures to prevent this neglected tropical disease. Much more attention has renewed interest in targeting metabolic enzymes in the treatment of infectious diseases (Zhou et al. 2013).
During the life cycle of Cl. sinensis, adult worms can take in external glucose and then get energy supply through glycolysis pathway (Kang et al. 1969). Triosephosphate isomerase (TIM), a key regulatory enzyme of glycolysis and gluconeogenesis, plays an essential role in metabolism and development of most organisms (Knowles 1991). TIM catalyzes the interconversion of dihydroxyacetone phosphate and glyceraldehyde 3-phosphate. Glyceraldehyde 3-phosphate can be further processed to pyruvate permitting the generation of ATP and NADH. Thus, TIM enables these three carbon atoms to be processed in the glycolytic pathway. Without this reaction, no ATP would be produced by glycolysis. In humans, hereditary deficiency of TIM is associated with a form of hemolytic anemia (Orosz et al. 2009). The loss of enzymatic activity most likely results from misfolding of the enzyme or its failure to dimerize (Daar et al. 1986; Seigle et al. 2008 and Ralser et al. 2006). Furthermore, the TIM knockout can lead to metabolic diseases and neurological dysfunction (Velur Selvamani et al. 2014; Roland et al. 2013; Eanes et al. 2006)
Giardia depends on glycolysis as its major ATP source (Adam 2001). TIM from Schistosoma species was considered as a potential drug and vaccine target (Chen and Wen 2011 and Zinsser et al. 2013a, b). Clonorchis sinensis triosephosphate isomerase (CsTIM) has been identified as a component of Cl. sinensis excretory/secretory products (CsESPs) (Zheng et al. 2011), which are generally believed to play key roles in host–parasite interaction in previous studies (Mulvenna et al. 2010 and Xu et al. 2013). However, the biochemical characterizations of CsTIM remain obscure. In this study, the expression, structures, and biochemical properties of CsTIM were characterized.
Materials and methods
Bioinformatics analysis of CsTIM
A full-length complementary DNA (cDNA; clone number csin105350) sequence encoding CsTIM was obtained from our Cl. sinensis cDNA library (Wang et al. 2011). The open reading frame (ORF) was found with ORF finder tool in NCBI web site (http://www.ncbi.nlm.nih.gov/). Proteomics tools in ExPaSy web site (http://www.expasy.org/) were used to analyze the physicochemical parameters, characteristic motifs, and functional domain of the deduced amino acids. The homology of the deduced amino acids was analyzed by Vector NTI suite 8.0.
Cloning, expression, and purification of the recombinant CsTIM
Sense primer (5′-CAGGATCCATGCCTACGGACAGAAAG-3′) introducing BamH I and restriction sites and antisense primer (5-′ATCTCGAGCTAGGCATTCGCATTGCAAATTTC-3′) harboring XhoI restriction sites were used to amply ORF of CsTIM from the template isolated from the cDNA of adult Cl. sinensis. The amplification was performed by a procedure of 35 cycles at 94 °C for 1 min, 60 °C for 1 min, and 72 °C for 1 min. The last extension of 5 min was performed at 72 °C before storing the samples at 4 °C. The obtained PCR products was purified and digested with BamH I and XhoI enzymes and then cloned into prokaryotic expression vector pET30a (+) that was predigested with the same enzymes. The recombinant plasmid was sequenced to ensure facticity and then transformed into Escherichia coli BL21 (E. coli, Promega, USA). The transformed bacteria were grown and induced with 1 mM isopropyl-β-D-thiogala-ctopyranoside (IPTG) at 30 °C for 4 h in Luria-Bertani medium (LB). After inductions, the bacteria were harvested by centrifugation at 8000×g for 15 min at 4 °C and suspended in native lysis buffer (0.5 M NaCl, 20 mM Tris–HCl, 5 mM imidazole, pH 8.0), sonicated on ice, and centrifuged at 12,000×g for 15 min at 4 °C.
The supernatant contained the recombinant fusion protein. Purification was performed with His Bind Purification kit (Novagen, USA) according to the user manual. The recombinant protein was dialyzed in 0.15 mol/l phosphate-buffered saline (PBS, pH 7.4) at 4 °C. Protein samples were analyzed by sodium dodecyl sulfide–polyacrylamide gel electrophoresis (SDS-PAGE). The purified protein concentration was measured by BCA protein assay kit (Novagen, USA).
Parasites and parasite proteins preparation
Adult worms, metacercariae, excysted metacercariae, and eggs were obtained as described previously (Na et al. 2008). Some adult worms, metacercariae, excysted metacercariae, and eggs were used to collect total proteins as described (Na et al. 2008; Alirahmi et al. 2010); others were kept at −80 °C for extraction total RNA. The excretory–secretory products (ESPs) were harvested as described (Zhou et al. 2013). The concentration of ESPs and total proteins was measured by BCA protein assay kit (Novagen, USA). After adding 10 mM phenylmethyl sulfonylfluoride (PMSF), all proteins were kept at −80 °C.
Anti-sera preparation
The purified rCsTIM (200 μg) and ESPs (200 μg) were respectively emulsified with equal volume of Freud’s complete adjuvant (Sigma, USA) and subcutaneously injected into Sprague-Dawley (SD) rats and followed by two booster injections of 100 μg purified rCsTIM and ESPs mixtures with equal volume Freud’s incomplete adjuvant at 2-week interval. Meanwhile, the pre-immune serum was taken before injection. The immune sera were collected at the 6th week. The titer of anti-sera was determined using enzyme-linked immunosorbent assay (ELISA) and stored at −80 °C.
Identification of CsTIM by western blotting
The purified rCsTIM (5 μg) and CsESPs (30 μg) were resolved on 12 % SDS-PAGE and then immobilized onto PVDF membrane (Millipore, USA). The PVDF membranes were blocked with 5 % (w/v) skimmed milk in PBS (pH 7.4) for 2 h at room temperature (RT) and then probed with rat anti-CsESPs (1:500 dilutions), anti-rCsTIM (1:1000 dilutions), and rat pre-immune serum (1:500 dilutions) for overnight at 4 °C, respectively. Excess of antibody was removed by washing the membrane five times for 5 min with PBS–0.05 % Tween 20. Membrane was then incubated with horseradish peroxidase (HRP)-conjugated goat anti-Rat IgG (1:4000 dilutions, ProteinTech Group, USA) for 2 h at RT. After washing the membrane five times, detection was then done with enhanced chemiluminescence (ECL) method.
Quantitative RT-PCR and western blotting analysis of CsTIM life stages of Cl. sinensis
Total RNA from adult worms, metacercariae, excysted metacercariae, and egg was respectively extracted using TRIZOL reagent (Invitrogen, USA) according to manufacturer’s protocol. Nucleic acid/protein analyzer (Beckman Coulter, USA) and agarose gel electrophoresis were used to test the quality and concentration of total RNA. First-strand cDNA was synthesized with reverse transcriptase (AMV, TaKaRa, Japan) with oligo (dT) primer using total RNA as template. Quantitative reverse transcription (RT)-PCR reactions were done on Bio-Rad iQ5 instrument (Bio-Rad, USA) using SYBR Premix ExTaq Kit (TaKaRa, Japan). The forward and reverse primers for CsTIM were 5′-TTCTTTGTTGGTGGAAACTGGA-3′ and 5′-GGATCAATCTTGGCATGGGTA-3′. C.sinensis β-actin (No. EU109284) was used as a internal control. The forward and reverse primers for Cl. sinensis β-actin were 5′-ACCGTGAGAAGATGACGCAGA-3′ and 5′-GCCAAGTCCAAACGAAGAATT-3′. The 20-μl PCR reactions contained 2 μl cDNA, 10 μl SYBR Premix ExTaq (2×), 0.4 μl each primer (10 μM), and 7.2 μl RNase-free distilled H2O. The quantitative RT-PCR was 95 °C for 30 s, 40 cycles of 95 °C for 5 s, and 60 °C for 20 s, with an incremental increase of 0.1 °C/s from 60 to 95 °C. The data was analyzed by using the 2−ΔΔCt method (Pfaffl 2001). Thirty micrograms of total proteins from adult worms, metacercariae, excysted metacercariae, and eggs were subjected to 12 % SDS-PAGE and then immobilized onto PVDF membrane (Millipore, USA). The PVDF membranes were probed with rat anti-CsTIM (1:1000 dilutions) and rat pre-immune serum (1:1000 dilutions) and then (HRP)-conjugated with goat anti-Rat IgG (1:4,000 dilutions). Detection was then done by enhanced chemiluminescence (ECL) method.
Immunohistochemical localization of CsTIM
The collected Cl. sinensis adult worms were fixed with formalin, embedded with paraffin wax, and sliced into 4–5 μm. Sectioned worms in paraffin wax were deparaffinized in xylene and hydrated in a series of graded ethanol. Then, they were blocked with normal goat serum for 2 h at RT and incubated with anti-rCsTIM rat serum (diluted 1:400 with 0.1 % BSA in PBS). Pre-immune rat serum was used as a negative control. After being washed three times with PBS–0.05 % Tween 20, the sections were Cy3 dye-conjugated with goat anti-rat IgG (1:400 dilutions, Molecular Probe, USA) for 1 h in the dark at RT and quenched for 15 min. The sections were washed again and subsequently imaged with fluorescent microscope (Zeiss, Germany).
Enzyme activity assay of rCsTIM
Triosephosphate isomerase activity was measured using glyceraldehyde 3-phosphate (Sigma, USA) as the substrate according to the description (Ostoa-Saloma et al. 1997) with slight modifications by continuously monitoring nicotinamide-adenine dinucleotide hyddrogen (NADH) utilization at 340 nm with a multifunctional microplate reader (SpectraMax M5). The standard assay mixture contained 100 mM triethanolamine and 10 mM EDTA, pH 7.4, 0.5 mM NADH, 1 mM glyceraldehyde 3-phosphate, and 1 U sn-glycerol 3-phosphate dehydrogenase (Sigma, USA) in a final volume of 150 μl. Reaction was initiated by the addition of rCsTIM. The change of NADH was determined by using an absorption coefficient (e = 6222 M−1 cm−1, 340 nm). One enzyme unit (U) is defined as the amount of enzyme which can oxidize 1 μmol NADH per minute. The effects of temperature and pH on enzyme activity were analyzed. All experiments were adapted to using Michaelis–Menten equation V = V max[S] / (K m + [S]).
Results
Sequence analysis of CsTIM
The ORF of CsTIM contained 759 bp encoding 252 amino acids with a predicted molecular weight of 27.7 kDa. Its isoelectric point was 6.66. No signal peptide or transmembrane region was found. The triosephosphate isomerase active site was found in the position of aa167–177. Blastx analysis showed that the deduced amino acid sequence was homologous with TIM of Caenorhabditis elegans, Schistosoma japonicum, Schistosoma mansoni, Drosophila melanogaster, and Homo sapiens with 61, 63, 65, 60, and 62 % (Fig. 1).
Expression, and purification of the recombinant CsTIM
The recombinant pET30a (+) plasmid containing CsTIM coding region was confirmed by sequencing. The recombinant CsTIM was expressed as a fusion protein with a 6× His-tag in E.coli with 0.5 mM IPTG induction at 37 °C for 4 h. The molecular mass of the purified protein was approximately 32.0 kDa (containing His-tag). The final concentration was about 450 μg/ml in PBS (Fig. 2).
Identification of CsTIM as a component of Cl. sinensis ESPs by western blotting
A specific band was visible when CsESPs were probed with anti-rCsTIM rat serum, and rCsTIM was recognized by anti-CsESPs rat serum, while no band was detected with naive rat serum (Fig. 3).
Quantitative RT-PCR and western blotting analysis of CsTIM at different developmental stages of Cl. sinensis
The transcripts of CsTIM were detected at the Cl. sinensis life cycle stages (adult worms, metacercariae, excysted metacercariae, and eggs) with Cl. sinensis β-actin messenger RNA (mRNA) as the internal control (Fig. 4a). Compared with adult worms, the expression of CsTIM mRNA was higher in both metacercariae and excysted metacercariae stages. Specific bands were detected with anti-rCsTIM rat serum by western blotting assay (Fig. 4b). Expression of CsTIM protein was highest in adult worms, followed by metacercariae, excysted metacercariae, and eggs, while no band was detected with naive rat serum.
Immunolocalization of CsTIM in the Cl. sinensis adult worm
The native CsTIM was detected in paraffin-embedded Cl. sinensis adult worm sections by immunolocalization. The protein was localized on the seminal vesicle, eggs, and testicle (Fig. 5), while the naive rat serum showed no specific fluorescence in all tissues.
Enzymatic characteristics of rCsTIM
The enzymatic activity of rCsTIM was more than 80 % under 25–55 °C, and the optimal temperature was 37 °C (Fig. 6a). The enzymatic activity of rCsTIM was more than 70 % at pH 7.0–10.0, and the optimal pH was 7.5–9.5 (Fig. 6b). The K m value of rCsTIM was 0.33 mM (Fig. 6c) when using glyceraldehyde 3-phosphate as the substrate.
Discussion
In this study, a full-length gene encoding TIM from Cl. sinensis was identified, cloned, and overexpressed in E. coli. The enzymatic characteristics of CsTIM were also investigated. TIM is a well-known glycometabolism enzyme in almost species, and its distinct properties have been described in parasitic infections such as Trichomonas vaginalis (Figueroa-Angulo et al. 2012), S. japonicum (Zhu et al. 2006), Fasciola hepatica (Zinsser et al. 2013a, b), and Taenia solium (Sanabria-Ayala et al. 2015). CsTIM showed high homology with other species (Fig. 1), indicative of similar functions between them. TIM had been shown conserved during evolution across species (Ostoa-Saloma et al. 1997). Analysis of qRT-PCR and western blotting indicated that CsTIM was expressed in all developmental stages of Cl. sinensis, i.e., adult worms, metacercariae, excysted metacercariae, and eggs. These imply the essential roles of CsTIM in glucose metabolism throughout the life stages. Interestingly, CsTIM exhibited higher mRNA and protein expression level in the adult worms, metacercariae, and excysted metacercariae stages (Fig. 4). CsTIM could serve as energy provider of C. sinensis adult worms creeping and transporting solutes and nutrients. When Cl. sinensis invade the definitive host and then transform into juvenile flukes and adults, they also need abundant energy through glycometabolism. Other research studies have shown that most of the glucose was degraded in the freshly excysted metacercariae of F. hepatica (Tielens et al. 1987). CsTIM was also expressed in vesicle, eggs, and testicle of adult worm (Fig. 5). These suggest that CsTIM as the glycometabolism enzyme could take part in energy generation in these organs for the growth and reproduction of the parasite. In addition, TIM was also detected in the cercariae and eggs of S. mansoni (Curwen et al. 2006; Cass et al. 2007).
Enzymatic analysis of rCsTIM showed that its enzymatic activity was more than 80 % of the optimal activity under 25–55 °C, and 70 % at the pH 7.0–10.0. The range of temperature and pH is responsible for catalytic activities for different host environments. The optimal temperature and pH range were close to other species, i.e., human (Dabrowska et al. 1978) and Leishmania donovani. The life cycle of Cl. sinensis involves many hosts (Wang 1983), and the temperature and pH of the hosts are different. Therefore, CsTIM is responsible for catalytic activities under host environment, suggesting that CsTIM plays an important role in generating energy and metabolic intermediates for growth and development of Cl. sinensis. The K m value CsTIM is similar to those records for the enzyme for other species. F. hepatica has a K m for glyceraldehyde 3P of 0.66 mM (Zinsser et al. 2013a, b), just double the value for CsTIM. For S. mansoni, this value is 1.11 mM (Zinsser et al. 2013a, b), which is more than threefold the value for CsTIM. The purified human skeletal enzyme has a K m value of 0.34 mM for glyceraldehyde 3P (Dabrowska et al. 1978).
rCsTIM was recognized by anti-CsESP rat serum, and CsESPs also can be probed by anti- rCsTIM rat serum by western blotting assay (Fig. 3). Moreover, CsTIM was identified as a component of CsESPs by LC-MS/MS (Zheng et al. 2011). How CsTIM is secreted, in the absence of a signal peptide, remains unclear. CsTIM as a component of CsESPs is probably due to an unknown secretory mechanism (Lorenzatto et al. 2012; Gomez-Arreaza et al. 2014). On the other hand, TIM has been detected in the ESPs of other flukes including Opisthorchis viverrini (Mulvenna et al. 2010), F. hepatica (Jefferies et al. 2001), S. mansoni (Guillou et al. 2007; Wilson 2012), and S. japonicum (Liu et al. 2009). What is more, it can take part in the recognition of cell surface and extracellular matrix glycoproteins in some pathogens (Karkowska-Kuleta et al. 2011; Furuya and Ikeda 2011; Furuya and Ikeda 2009; Pereira et al. 2007). Therefore, CsTIM may participate in host–parasite interaction.
Taken together, CsTIM is an important protein involved in glycometabolism. The protein also takes part in many biological functions in the growth and development of Cl. sinensis, such as generating energy, metabolic intermediates, and reproduction. What is more, CsTIM takes part in host–parasite interaction. Our study will be the cornerstone for better understanding of biological characterization of CsTIM and the role of host–parasite interplay.
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This study was funded by the National Natural Science Foundation of China (No. 81101270 and No. 81171602.) and the National Important Sci-tech Special Projects (2012ZX10004220).
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Juanjuan Zhou and Hua Liao contributed equally to this work.
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Zhou, J., Liao, H., Li, S. et al. Molecular identification, immunolocalization, and characterization of Clonorchis sinensis triosephosphate isomerase. Parasitol Res 114, 3117–3124 (2015). https://doi.org/10.1007/s00436-015-4530-z
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DOI: https://doi.org/10.1007/s00436-015-4530-z