Abstract
Early prostate cancer (PCa) diagnostic is crucial to enhance patient survival rates; besides, non-invasive platforms have been developed worldwide in order to precisely detect PCa biomarkers. Therefore, the aim of the present study is to develop a new aptamer-based biosensor through the self-assembling of thiolated aptamers for PSA and VEGF on the top of gold electrodes. This biosensor was tested in three prostate cell lines (RWPE-1, LNCaP and PC3). The results evidenced a stable and sensitive sensor presenting wide linear detection ranges (0.08–100 ng/mL for PSA and 0.15 ng–100 ng/mL for VEGF). Therefore, the aptasensor was able to detect the patterns of PSA and VEGF released in vitro by PCa cells, which gave new insights about the prostate cancer protein dynamics. Thus, it could be used as a non-invasive PCa clinical diagnosis instrument in the near future.
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Introduction
Prostate cancer (PCa) is becoming a disease of increasing significance worldwide. Estimates assume it as the second most common cancer type in men; accordingly to the American Cancer Society the projection for 2017 are 161,360 new cases of PCa with 26,730 death from PCa. Moreover, 1 man in 7 will be diagnosed with PCa during his lifetime, which made the disease the fifth leading cause of death among men [1]. The mortality rates are annually increasing due to the difficulty of diagnosing the disease in its initial stages [2]. So far, the traditional clinical diagnostic techniques rely on transrectal ultrasonography, digital rectal examination (DRE), computed tomography scan, magnetic resonance imaging and cancer protein assay [3,4,5,6]; however, most of these techniques are invasive, require time and need to be performed by skilled professionals. It is crucial detecting and diagnosing PCa cases in their initial stages; therefore, the need of more powerful diagnostic instruments has been growing. Accordingly, the use of new biomarkers for PCa diagnostic has become a very specific and promising research field [7, 8].
The prostate-specific antigen (PSA) has been the most popular and effective marker used to detect PCa since 1994 [9]. Clinical data have shown that values of PSA higher than 4 ng/mL are treated as abnormal [10]; however, PSA itself lacks specificity to precisely detect the presence of PCa. High PSA levels can be related to benign prostatic hyperplasia (BPH), prostatitis, or cystitis [11,12,13]. Due to lack of accuracy, other proteins such as the vascular endothelial growth factor (VEGF) have been investigated as additional biomarker to improve PCa-detection efficiency [14].
The VEGF is a protein from the platelet-derived growth factor family of cystine-knot growth factors, and it is mainly responsible for stimulating vasculogenesis and angiogenesis. Moreover, it plays a vital role in physiological functions such as bone formation and wound healing [15, 16]. The VEGF concentration monitoring may be adopted to detect diseases such as bronchial asthma and diabetes mellitus [17]; therefore, VEGF can be also used as biomarker to detect different human cancer types, including brain, lung, breast, urinary tract or gastrointestinal tumors due to its increased production [18,19,20]. Circulating levels of VEGF is a biomarker of the degree and activity of tumor angiogenesis and could improve PSA diagnosis accuracy for PCa [14]. However, only few systems were able to detect VEGF and PSA proteins simultaneously; however, they are often based on ELISA, fluorescence or electrochemical techniques and are dependent on the quality of antibodies for their sensitivity, specificity, moreover, they have the drawback of being relatively time consuming, and expensive which limits their applications [21]. Monitoring the VEGF and PSA concentration release by prostate cells is a suitable instrument to estimate cancer stage and it can provide an accurate diagnosis through non-invasive techniques.
Recent advances in the preparation of aptamers have promoted their usage in place of classical techniques due to their comparable binding affinities and stability under heat or pH variation. In addition, aptamers can be easily synthesized, isolated, and modified, and are highly resistant to denaturation [22, 23]. The probes are selected in vitro through exponential enrichment (SELEX) based on the ligands’ systematic evolution [24]; more specific the selection of aptamers to target specific types of cells are nominated as Cell-SELEX [25]. The aptamer-based methods present countless advantages over the traditional antibody assays in early cancer detection; their main merits lie on high selectivity, affinity and stability. In addition, aptamers are cheaper than antibodies, they can also be regenerate after denaturation, which can increase the shelf life of a commercial aptamer-based detection kit developed for PCa diagnostic [26].
To better understand VEGF presence combined with PSA level as a prognostic factor for cancer detection, we described a novel electrochemical aptamer-based biosensor able to detect the VEGF and PSA released by prostate cancer cells in order to provide new insights about the PCa-stage evaluation and the protein release dynamics correlated to cancer aggressiveness which can be correlated with PSA and VEGF in serum for a more precise and cohesive diagnosis. The biosensor was based on the self-assembly of thiolated aptamers on gold-covered surface using methylene blue (MB) as redox label. When the protein binds to the aptamer, the DNA hairpin unfolds and it leads to electron transfer reduction and, consequently, to changes in the redox current. Our biosensor can be adopted to achieve a fast and accurate clinical PCa-stage diagnosis in the future.
Materials and methods
Chemicals and reagents
The silicon wafers (100 mm diameter, and 500 μm thick) were supplied by University Wafer (Boston, MA). The phosphate-buffered saline (PBS), 6-mercapto-1-hexanol (MCH), bovine serum albumin (BSA) (98%), uric acid (UA), ascorbic acid (AA), sulfuric acid (H2S04), Ferrocene (Fc), Nucleopore Track-Etch Membrane (13 mm, 0.2 μM), prostate-specific antigen from human semen (99%) and human vascular endothelial growth factor were purchased at Sigma-Aldrich (St. Louis, MO). The Trypsin-EDTA, the cell culture medium RPMI 1640 (1×, with L-glutamine; VWR) supplemented with fetal bovine serum (FBS), the L-glutamine and the penicillin/streptomycin were purchased at Gibco®, (Whaltham, MA). The aptamer sequences were used as follows:
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PSA: 5′-SH/-TT TTT AAT TAA AGC TCG CCA TCA AAT AGC TGG GGG-3′-/MB
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VEGF: 5′-SH/-T GTG GGG GTG GAC GGG CCG GGT AGA-3′-/MB.
Both were bought at Biosearch Technologies, Novato, CA, USA. Aptamer structures were analyzed by IDT OligoAnalyzer platform and it is possible to see the hairpin structure for both sequences (Scheme 1b.)
Gold-coated silicon electrode preparation
The silicon wafer worked as electrode in all electrochemical measurements; thus, it was modified at São Paulo University by the sputtering of a 5-nm gold layer and used as aptamers-attachment substrate. The aptamer was cleaned in isopropyl ethanol, rinsed in ultra-pure water and dried under nitrogen blowing, before its incubation in PSA or VEGF.
Preparing the aptamer-based biosensors
The aptamers were modified through Biosearch Technologies at 5′-terminus in C6-disulfide linker in order to have it bound to the gold electrode; and at 3′-end in MB (as redox probe) to perform the electrochemical analysis, which was followed by the HPLC purification process to remove truncated-synthesis products and to enrich the purity of the aptamer sequences. The VEGF and PSA aptamers stock solutions were diluted in 10 mM of PBS buffer (pH 7.4), according to the manufacturer’s protocol.
Aptamer immobilization was conducted through the incubation of 1 μM thiolated aptamer on the top of the gold-coated silicon electrode for 18 h, in the dark, at 4 °C. Subsequently, the electrodes were washed in ultra-pure water and immersed in 3 mM of MCH aqueous solution for 30 min. It was done to displace the nonspecifically adsorbed aptamer molecules and to passivate the electrode surface through the backfilling method. Finally, the electrodes were once more rinsed in DI water to remove MCH excesses; then they were ready to be immediately used in electrochemical measurements or to be stored in buffer solution at 4 °C.
Prostate cell culture
The following cell lines were used: normal human prostate cells (RWPE-1; ATCC® CRL-11™), androgen-sensitive human prostate cancer cells (LNCaP; ATCC® CRL-1740™) and androgen-independent human prostate cancer cells (PC-3; ATCC® CRL-1435™). The three lineages (one composed by normal and two composed by tumor cells) were chosen to improve PSA and VEGF production comparisons and their release by a range of prostate cell types. Thus, the cells were cultivated in 75 cm2 flasks containing RPMI media, supplemented with FBS, L-glutamine and penicillin/streptomycin. The cells were cultivated until they reached 90% confluence, after they were trypsinized in trypsin-EDTA. Cell viability was assessed through the Neubauer chamber technique; approximately 10^5 cells were used in all experiments. A nuclear track-etch membrane with pore size 0.2 μm (Sigma-Aldrich, St. Louis, MO) was used as cell-attachment surface, and it did not compromise the aptamer layer (Scheme 1).
Electrochemical characterization of the aptasensor
The aptasensor was characterized through scanning electron microscopy (SEM) using a Quanta 200 (FEI Company) coupled to an energy-dispersive X-ray spectroscopy analyzer (EDS) to make sure about the presence of the gold layer on the top of the silicon wafers.
The electrochemical characterization was conducted in a potentiostat μAutolabIII /FRA2 (Metrohm, NL), using a three-electrode system, which consisted of Ag/AgCl (3 M KCl), as reference electrode; Pt wire, as counter electrode; and gold-coated silicon wafer, as working electrode. The electrochemical characterization experiments were performed by cyclic voltammetry (CV) at scan rate 50 mV/s, ranging from − 0.2 to 1.7 V, versus Ag/AgCl references in 1 mM H2SO4 (pH 7.4), 25 cycles of CV were done to evaluate the consistency of gold layer deposited on top of Si wafers. In addition to CV, electrochemical impedance spectroscopy (EIS) were done in order to validate the step by step assembling of the aptasensor by evaluation of charger transfer resistance with an amplitude of 0.005 V in frequency range of 0.001 to 10,000 Hz in a 1-mM H2SO4 solution (N2 was bubbled for 10 min to remove O2 from solution) containing 0.5 mM of Fc (pH 7.2), all impedance spectra were fitted to equivalent electrical circuits using NOVA software (Metrohm, NL).
Surface plasmon resonance (SPR) were done to evaluate the interaction between hairpin thiolated aptamer and gold surface regarding to the aptamer density over the Au surface (AutoLabSpringle, Eco Chemie, NL), in which an increase in the plasmon resonance angle of 120 millidegrees corresponds to a deposition of 1 ng/mm2 on top of the gold disc, the experimental setup is described in details elsewhere [27].
PSA and VEGF electrochemical characterization and detection
The detection strategy relied on binding specific proteins to a self-assembled thiolated aptamer hairpin sensor in order to unfold hairpin structures, which decreased the efficiency of electron transfer from MB to working electrode surface. Moreover, signal difference was measured through square wave voltammetry (SWV) at 40 mV amplitude, and 60 Hz frequency ranging from 0.0 to − 0.5 V. The electrochemical cells consisted of multi-chamber batch mode with PSA or VEGF aptamer incubated separately and due to the fast SWV procedure it was able to do measurements with minimum time difference (less than 1 min).
The electrodes were modified by the aptamer molecules (PSA or VEGF), as described above, and were placed into custom-made Nylon electrochemical cells, in a system containing three electrodes. The aptasensor was allowed to equilibrate through stable faradaic current, in order to enable PSA and VEGF characterization and detection. Electrodes were characterized through SWV, without the presence of cells, to make sure that a well-formed aptamer layer would be formed; therefore, the electrode linked to the aptamers was stored in PBS buffer, only. Measurements were taken every 15 min, for 2 h, in order to evaluate changes in the aptasensor’s background signal.
The VEGF and PSA aptamers were challenged in several concentrations of prostate specific antigen and human vascular endothelial growth factor, respectively, in the calibration curve analysis (PSA or VEGF aliquots of known concentration were introduced into the electrochemical cell after the background current stabilized). The sensor was allowed to react with analyte, for 20 min, before each measurement; signal loss was checked through SWV and converted into signal suppression (SS) percentage. All measurements were carried out in triplicate and the limit of detection (LOD) was calculated through linear regression by using the standard deviation of the y-intercept (LOD = 3σ/Slope).
Electrochemical detection of the PSA and VEGF released by prostate cells
The electrochemical measurements applied to human prostate cells followed the same procedures described above, with minor modifications. Therefore, the electrochemical cell containing VEGF and PSA aptamers was kept under 5% CO2, 95% air humidity atmosphere, at 37 °C. The millipore membrane was added on the top of working electrode with a dual purpose, to be a barrier and to provide substrate for cells attachment without harming aptamer surface. It was done to avoid signal disruption due to cell adsorption over the working electrode modified by the aptamers. The SWV measurements were taken every 20 min, for 3 h, after cell incubation (Scheme 1).
Results and discussion
Optimization and characterization of aptasensor
The gold-coated silicon wafer surface was investigated through SEM and EDS, in order to assure the formation of a well-dispersed gold layer of dual purpose, namely acting as working electrode, and anchoring the thiolated aptamer on the surface. Figure 1a shows a bare silicon wafer, partially coated with gold, to evidence the formation of a uniform thin gold layer on the top of the surface; however, without any open space or gold agglomerate. Moreover, Fig. 1b represents the EDS scan of the surface, which was performed to assure the presence of gold atoms; therefore, it is possible verifying the unique set of gold and silicon peaks in the electromagnetic emission spectrum [28]. Figure 1c shows a typical cyclic voltammogram of gold surfaces presenting cathodic peak at +1.45 V, and anodic peak at +0.8 V; the 25 cycles (black lines) indicate enhanced electron transfer after gold layer deposition on top of silicon wafer with high stability, which can be used as working electrode, in contrast to bare Si surface (red line) [29].
The aptamer immobilization on the top of the gold-coated silicon wafer was accomplished through surface coordinated chemistry, which generated well-defined surface patterns by using thiols linkers attached to the gold layers in order to form self-assembled monolayers (SAMs) [29]. Real time monitoring of layer formation by SPR technique revealed a well disperse aptamer surface with density of 6.6 ng/mm2 [30]. Subsequently, the surface was passivated through the backfilling technique, with MCH, which is a well-known methodology to work with thiolated DNA sensor surfaces [31].
The electrochemical behavior of the aptamer biosensor was analyzed through square wave voltammetry (SWV), using MB as redox indicator. The MB redox tag was chosen due to the possibility of anchoring it on the aptamers hairpin structure; it is also used in a wide range of aptamers to detect several protein and cytokine types, as well as other biomarker types [32,33,34]. The aptamer surface stability was achieved by measuring SWV in buffer for 2.5 h, before detecting the aptasensor to target the proteins (PSA and VEGF). Figure 2a, b represents the PSA and VEGF stability in the herein developed sensor over time. The background signal starts to stabilize after 1 h measurement, it shows lower signal suppression (less than 10% signal loss), as well as stability comparable to that of other electrochemical aptamer biosensor types [14, 32, 35]. Moreover, SWV, EIS and were done over step by step assembling of the aptasensor as shown in Fig. 2c. The MB peak remained constant on every step, even the addition of the filter did not cause electrochemical hindrance or disruption of the signal. In addition, to verify interfering compounds species, 100 mM of AA and UA was added and there was no competitive peak over MB peak range.
EIS was performed to evaluate charge transfer resistance. Figure 2d shows the Nyquist plots of impedance, the semicircle diameter can be related with the charge transfer resistance (R ct) at the electrode surface. Figure 2d shows the EIS spectra on a step-by-step assembling of the aptasensor; the R ct was 17 KΩ for bare Au surface (black squares). After aptamer immobilization, the resistance increased to 31 kΩ (red circles), consequently adding MCH and recombinant protein also increased the resistance (56 kΩ and 83 kΩ, respectively) which validate the formation of each layer of the aptamer-based biosensor.
PSA and VEGF detection and monitoring
The calibration curve was obtained to quantify the limit of detection and the linear detection range of PSA and VEGF after stability optimization; therefore, the aptasensor was challenged in several target protein concentrations (from 5 to 100 ng/mL). Figure 3a represents the SWV graph of the PSA calibration curve, and Fig. 3b plots signal losses caused by the PSA binding to the aptasensor, according to the following calculation: ΔI = Ipb − Ipa (ΔI = change in current, Ipb = peak current before protein incubation and Ipa = peak current after protein incubation); these losses were converted into signal loss (SS) percentage. The PSA signal suppression (Fig. 3b) linearly increased due to the PSA concentration; wherein: SS = 0.61 + 1.9 × (R 2 = 0.989), and the detection limit was estimated to be 1.1 ng/mL—with linear range of 0–100 ng/mL. The present aptasensor can be used to detect PSA in clinical samples, because its PSA range in PCa is higher than 4 mg/mL [10]. The repeatability was expressed as the relative standard deviation (RSD 4.2%) value of the signal suppression for five injections of the same concentration of PSA protein at different times. These results reveal that the aptasensor has higher activity with higher affinity to PSA.
The VEGF was analyzed through the same protocol, in addition to the PSA calibration curve. Figure 3c shows the SWV of the VEGF calibration curve, which evidences changes in the peak current in every challenge set in each of the tested proteins. Figure 3d shows linear SS increasing at VEGF concentration wherein SS = 0.23 + 2.05× (R 2 = 0.986), and limit of detection was calculated at 0.32 ng/mL. The repeatability calculated 5.2% value of the signal suppression for five injections of the same concentration of VEGF protein at different times. These results are comparable to other biosensor types used to detect VEGF and PSA; they can be used to monitor the protein released by prostate cells (normal and cancerous) [14].
The literature provides a wide range of studies aimed at developing aptamers to target VEGF and PSA; however, few studies have actually focused on using aptamers to detect the PSA and VEGF released by cells and this is of utmost importance due to the need to understand protein released patterns by different types of cells which can be correlated with cancer aggressiveness [8, 14, 36]. The PSA and VEGF release dynamics may change depending on the used prostate cell type. Three (3) cell lines were chosen, a control line (normal prostate cells, RWPE-1), an androgen-sensitive human prostate cancer cell (LNCaP), and a more aggressive androgen-independent human prostate cancer cell (PC-3) [37]. The optimization of the aptasensor stability was performed to make sure about the acquisition of optimal data through fast experiments in order to create a robust biosensor to be used for clinical diagnostics. Thus, cells and aptamers were left to rest for 1 h in order to stabilize and reduce the background signal from electrochemical experiments, before the SWV measurements from cells were taken.
The PSA monitoring patterns are shown in Fig. 4. The PSA produced through RWPE-1 (Fig. 4a, b) was approximately 2 ng/mL at the end of the experiment; it was comparable to the PSA levels presented by healthy patients. The PSA was overexpressed as LNCaP, because it presented values close to 5 ng/mL at the end of the experiment (Fig. 4c, d). On the other hand, the PC3 line (Fig. 4e, f) showed almost no PSA production. The detection of PSA by aptasensor is in line with cells lineage type, due to the androgen dependence and active androgen receptor of LNCaP, an overexpressed PSA released was verified [38, 39]. For PC3 cells a zero production of PSA was achieved, since this cell type had a lack in PSA gene expression [40, 41]. Accordingly, the current findings are in compliance to the PSA release dynamics, and it can be associated with tumor aggressiveness and gene alterations. The LNCaP cell lines were able to produce larger PSA amounts in RPMI, and consequently, to lead to the wide range of PSA concentrations described in the literature (from 0.1 to 110 ng/mL) [42, 43]. In addition, the multifarious results concerning the PSA released by LNCaP meet experiments conducted in vivo, because of the acute and chronic stimuli that may modulate the PSA expression by cancer cells [44, 45]. Moreover, the PC3 cells usually do not produce PSA, fact that can be associated with tumor aggressiveness due to cells’ androgen-independence to proliferate [46, 47].
The VEGF monitoring patterns are shown in Fig. 5 in parallel to the PSA detection. The monitoring of VEGF from prostate cells can give new insights about targeting of different PCa, and it may expand the range of biomarkers used in early prostate cancer diagnostics; besides, it can be related to tumor aggressiveness [48, 49]. The RWPE-1 (Fig. 5a, b) showed zero VEGF production and SS comparable to the background signal throughout the whole experiment. On the other hand, LNCaP (Fig. 5c, d) and PC3 (Fig. 5e, f) have shown an overexpressed VEGF production and higher SS value at the end of the experiment (5 ng/mL for LNCaP and 30 ng/mL for PC3). The higher VEGF production in PC3 is explained by the metastatic aggressiveness of this line, which is able to spread all over the human body; whereas LNCaP is a less aggressive PCa type [50, 51]. The VEGF release dynamics shown in the present study meet the results described in the literature, namely higher VEGF expressions are related to patients with metastatic prostate cancer [52, 53].
Conclusions
The present study addresses a new aptamer-based biosensor capable of monitoring the PSA and VEGF released from prostate cells (normal and cancerous) through a biosensor based on aptamers on the top of gold electrodes. The PSA and VEGF detection limits were 0.08 ng/mL and 0.15 ng/mL, respectively, at linear range up to 100 ng/mL. In addition, the herein developed aptasensor was able to verify, at accurate and robust response, the patterns of the PSA and VEGF released by different cell lines (RWPE-1, LNCaP and PC3); it is the first aptasensor type used to access the patterns of protein production and release presented by PCa. This biosensor can be a useful clinical diagnosis instrument to detect initial PCa stages in the near future.
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Acknowledgments
The authors thank FAPESP (2016/15919-8), CAPES and CNPq, Brazil, for the grants and the financial support to this work.
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Crulhas, B.P., Karpik, A.E., Delella, F.K. et al. Electrochemical aptamer-based biosensor developed to monitor PSA and VEGF released by prostate cancer cells. Anal Bioanal Chem 409, 6771–6780 (2017). https://doi.org/10.1007/s00216-017-0630-1
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DOI: https://doi.org/10.1007/s00216-017-0630-1