Abstract
Formation of cross-bridges between actin and myosin occurs ubiquitously in eukaryotic cells and mediates muscle contraction, intracellular cargo transport, and cytoskeletal remodeling. Myosin motors repeatedly bind to and dissociate from actin filaments in a cycle that transduces the chemical energy from ATP hydrolysis into mechanical force generation. While the general layout of surface elements within the actin-binding interface is conserved among myosin classes, sequence divergence within these motifs alters the specific contacts involved in the actomyosin interaction as well as the kinetics of mechanochemical cycle phases. Additionally, diverse lever arm structures influence the motility and force production of myosin molecules during their actin interactions. The structural differences generated by myosin’s molecular evolution have fine-tuned the kinetics of its isoforms and adapted them for their individual cellular roles. In this chapter, we will characterize the structural and biochemical basis of the actin-myosin interaction and explain its relationship with myosin’s cellular roles, with emphasis on the structural variation among myosin isoforms that enables their functional specialization. We will also discuss the impact of accessory proteins, such as the troponin-tropomyosin complex and myosin-binding protein C, on the formation and regulation of actomyosin cross-bridges.
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Introduction
The actin-myosin complex is a molecular partnership that sustains the existence of eukaryotes, ranging from amoebas to humans. This wide phylogenetic distribution reflects the functional importance of actomyosin interactions. Although conventionally linked to muscle contraction, the unconventional myosins in other cell types govern numerous processes including cell motility, cargo transport, cytoskeletal organization, and tension sensing (reviewed in (Hartman et al. 2011)). Despite this diversity, the function of actin-myosin interactions can be broadly characterized as supporting movement across many biological scales: from the movement of intracellular cargo along the cytoskeleton to the movement of multicellular organisms powered by muscle contraction. Not surprisingly, all myosins share a general mechanism that involves coupling ATP hydrolysis and actin binding to generate force. The universal transduction of chemical energy into mechanical work is reflected in the conserved myosin head, whose motor domain harbors its ATP- and actin-binding activities. Although sequence identity is less than 20% when comparing sequences of heads of evolutionarily distant myosins, conservation of tertiary structure and functionally critical residues has maintained a general consistency of actin-myosin interactions across the eukaryotic tree of life (Cope et al. 1996; Pasha et al. 2016). The primary sequence differences between motor domains ensure that while the steps involved in the ATPase cycle are the same across the board, the rates and equilibrium constants of those steps are tailored for the functional role of each myosin (Shuman et al. 2014; Sweeney et al. 1998). Myosin tail domains exhibit much greater variability in their architectures, with implications for the myosin molecule’s ability to dimerize (reviewed in (Krendel and Mooseker 2005)) as well as recognize and mobilize intracellular cargoes (reviewed in (Lu et al. 2014)). Despite exhibiting different conservation patterns, phylogenetic evidence indicates coevolution of the head and tail domains within the myosin protein family (Korn 2000). In contrast to myosins, muscle and cytoplasmic actin isoforms share >90% sequence identity (Perrin and Ervasti 2010; Vandekerckhove and Weber 1978). Thus, the actin-myosin system involves variable myosin motors operating along a conserved actin track (Robert-Paganin et al. 2020).
In this chapter, we aim to shed light on recent advances in our knowledge of actomyosin interactions and their physiological function. We will begin by surveying the general structural features of actin and myosin proteins, as well as the mechanochemical cycle driven by their interaction. This will lead into a discussion of the structural and biochemical evidence, acquired from a variety of myosin isoforms, about each transition in the cross-bridge cycle. We will highlight the isoform-specific differences within the actin-binding interface in the rigor state, which can explain functional differences in actomyosin interactions. After thoroughly characterizing the actomyosin cross-bridge cycle, we will discuss proteins that regulate actomyosin interactions in a muscle sarcomere. We will conclude by presenting examples of how diverse myosin families carry out a vast number of physiological functions while interacting with highly conserved actin filaments.
General Structural Features of Actin and Myosin
Actin
Overview of the Actin Structure
The motor activity of myosin completely relies on its interaction with actin. Actin represents one of the most abundant proteins in the cellular environment, accounting for roughly 10% of total protein content (Farmer et al. 1983). Prior to transition into its active filamentous state, actin exists in a monomeric or globular form (referred to as G-actin). G-actin is a 43-kDa polypeptide with 375 amino acids that are divided into 4 subdomains (Fig. 14.1a). Starting from the traditional orientation of SD1 (residues 1–32, 70–144, and 338–375) in the lower right quadrant (Fig. 14.1a, blue), the other three subdomains are related to each other as follows: SD2 (residues 33–69) lies just above SD1 (Fig. 14.1a, dark green), SD3 (residues 145–180 and 270–337) is located to the left side of SD1 (Fig. 14.1a, light green), while SD4 (residues 181–269) is directly above SD3 in the upper left (Fig. 14.1a, cyan) (Kabsch et al. 1990). Based on their position within the actin filament, SD1 and SD2 together comprise the outer domain, whereas SD3 and SD4 make up the inner domain. These two domains, connected by a hinge region (residues 137–145 and 335–337), form a so-called cleft which harbors a nucleotide (Fig. 14.1a, brown) and a divalent cation (e.g., Mg2+ or Ca2+) (Fig. 14.1a, magenta). All mammalian genomes encode for at least six actin isoforms (reviewed in (Perrin and Ervasti 2010)). Skeletal and cardiac muscles each contain their own α-isoforms, while smooth muscle utilizes α-isoform in vascular tissue and γ-isoform in enteric tissue. The β- and γ-cytoplasmic isoforms are present in non-muscle cells. Comparison of all six mammalian isoforms reveals that 347 of the 375 amino acid positions (92.5%) are identical. This conservation pattern is mirrored when comparing actin orthologs from different species – mammalian cytoplasmic actin is 100% identical to chicken and 90% identical to yeast (Egelman 2001).
The first atomic structure of G-actin was revealed by X-ray crystallography (Kabsch et al. 1990) (Fig. 14.1a) to give rise to the first atomic model of the actin filament (Holmes et al. 1990) based on X-ray diffraction pattern from polymerized actin (referred to as filamentous actin or F-actin). Nearly 20 years later, (Oda et al. 2009) used methodological innovations to obtain an improved X-ray fiber diffraction pattern to reveal the conformational “flattening” of G-actin upon polymerization (Fig. 14.1b), which was confirmed later using cryo-EM (Chou and Pollard 2019; Fujii et al. 2010; Galkin et al. 2015; von der Ecken et al. 2015). The power of cryo-EM has been harnessed in recent years to elucidate the precise molecular details of actin’s structural transitions. The near-atomic three-dimensional (3D) cryo-EM reconstructions of F-actin with different bound nucleotides (Chou and Pollard 2019; Merino et al. 2018) showed the structural transitions of individual F-actin subunits that occur upon ATP hydrolysis and phosphate release (Fig. 14.1c and d). They suggest that upon G- to F-actin transition, the flattened conformation of the actin molecule (Fig. 14.1b) results in repositioning of the Q137 and H161 residues closer to the γ-phosphate so that their hydrogen-bonded water molecules are now optimally positioned for ATP hydrolysis (Fig. 14.1c). Pi then exits through a back-door mechanism modulated by more subtle conformational changes of S14, the H73 sensor loop, and R177 (Chou and Pollard 2019; Wriggers and Schulten 1999) (Fig. 14.1d).
Formation of the Actin Filament
Formation of the actin filament (reviewed in (Pollard 2016)) includes three phases: (1) nucleation or formation of oligomers, which is the rate-limiting step; (2) elongation, in which additional monomers are added to the nucleated oligomer; and (3) steady-state, in which the rate of monomer addition at one filament end equals the rate of disassembly at the other end (Fig. 14.2a). The two ends of the filament display asymmetrical polymerization kinetics (Pollard 1986) – whereas filament growth happens at the “barbed”(+) end of filaments, subunit dissociation is mainly localized to the “pointed”(-)end (Fig. 14.2a). The result is end-to-end treadmilling of actin subunits at steady-state, with filaments maintaining a constant average length (Brenner and Korn 1983; Fujiwara et al. 2002; Wegner 1976). The difference in “flattening” of actin molecules upon addition to the filament from either end may explain the differential rate of filament elongation at the ends (Chou and Pollard 2019). To prevent spontaneous polymerization of G-actin in the cell, the formation of actin filaments is controlled by a variety of actin-binding proteins (Fig. 14.2b–d). There are two types of actin monomer-binding proteins (reviewed in (Pollard 2016)): sequestering proteins (e.g., profilin and thymosin-β4), which prevent actin monomers from spontaneous polymerization and nucleation-promoting factors (NPFs). The Wiskott-Aldrich homology 2 (WH2) domain-containing proteins (e.g., WASP) have been shown to promote regulated branching of actin filaments via recruitment of the actin-related proteins 2/3 complex (Arp2/3) (reviewed in (Molinie and Gautreau 2018; Pollard 2007)), while formins have been shown to promote elongation at the ends of the filaments (reviewed in (Courtemanche 2018)). Depolymerization of actin filaments is controlled by severing proteins (e.g., cofilin/ADF and gelsolin) (reviewed in (Pollard 2016)), which maintain the cellular balance between G- and F-actins.
An actin filament consists of two right-handed helices wrapped around each other in a staggered manner, such that lateral subunits on opposite strands are offset by half the monomer length (Fig. 14.3a). Two types of intersubunit contacts maintain actin filament integrity: longitudinal contacts linking the monomers on each strand (Fig. 14.3b–d) and lateral contacts joining both strands together (Fig. 14.3e–f) (Chou and Pollard 2019; Merino et al. 2018; Risi et al. 2021a; von der Ecken et al. 2016; von der Ecken et al. 2015).
Most of the longitudinal interactions between actin protomers are formed between the SD2 of the lower actin and SD1 and SD3 of the upper subunit (Fig. 14.3b and c). The tip of the D-loop of the lower subunit (Fig. 14.3b, blue atoms) makes hydrophobic interactions with residues of the upper subunit that form a hydrophobic cavity between its SD1 and SD3 (Fig. 14.3b, red atoms). Meanwhile, an H-bond links lower protomer’s SD2 (Fig. 14.3b, plum atoms) with SD1 of the upper subunit (Fig. 14.3b, orange atoms). Finally, positively charged residues of SD2 of the lower actin (Fig. 14.3c, blue, red, and green atoms) make salt-bridges with the acidic residues of SD3 of the upper subunit (Fig. 14.3c, plum, yellow, and orange atoms). Interactions between SD4 of the lower actin and SD3 of its upper counterpart are held by the salt-bridge between D244 of SD4 (Fig. 14.3d, red atoms) and R290 of SD3 (Fig. 14.3d, blue atoms). The lateral interactions are comprised of a salt bridge between the H-plug and the SD2 of the actin subunit across the strand (Fig. 14.3e, green and orange atoms, respectively). In addition, a lateral contact is formed by the ionic interaction between SD1 and SD4 of the two actins across the strand (Fig. 14.3f, blue and red atoms, respectively).
Myosin
Overview of the Myosin Structure
The myosin polypeptide can be subdivided into its head and tail regions (Fig. 14.4a). The head contains the motor domain (Fig. 14.4a, red), which holds the ATP- and actin-binding sites and represents the most conserved portion among all myosin classes (Cope et al. 1996; Foth et al. 2006). The lever arm (Fig. 14.4a, yellow and green) generates force by converting Ångstrom-scale motor domain conformational changes into nanometer-scale movements (Jontes et al. 1995; Whittaker et al. 1995). The tail (Fig. 14.4a, blue) represents the most variable part of all myosins since its architecture is directly linked to their functionality. For example, membrane-binding tail domains of class I myosins permit them to dynamically regulate membrane-cytoskeleton interactions by sensing intracellular mechanical forces when bound to the actin filament (Fig. 14.4b) (reviewed in (McConnell and Tyska 2010)). While myosin I works as a monomer, other myosins have to form dimers or even filaments via their α-helical coiled-coil domains. For instance, class II muscle myosin forms filaments, in which the coiled-coil rods are packed together in a parallel cylindrical arrangement (Fig. 14.4c) (Al-Khayat et al. 2013; Hu et al. 2016; Kensler and Stewart 1983). On the other hand, class V myosins (e.g., Myosin Va) form a dimer using its tail domain, which also contains a cargo-binding domain (CBD) responsible for transporting its intracellular cargoes (Fig. 14.4d) (Pylypenko et al. 2013; Wu et al. 2002).
Due to the low solubility of the complete myosin molecule under physiological salt concentrations (Margossian and Lowey 1982), water-soluble head fragments generated via enzymatic digestion of muscle myosins have been the main source of knowledge regarding its structure and kinetics. Trypsin segments the molecule in the middle of its tail (Fig. 14.4e, cyan arrow) to generate the heavy meromyosin (HMM) segment containing the head and proximal tail (Mihalyi and Szent-Gyorgyi 1953). HMM can be further digested by papain (Fig. 14.4e, red arrow) to produce the so-called subfragment-1 (myosin-S1), which exclusively contains the motor domain and lever arm regions, and the proximal tail fragment called S2 (Kominz 1965). Isolated myosin-S1 heads (Fig. 14.4e, denoted as S1) can perform as minimal motor units in vitro, as demonstrated by their ability to couple ATP hydrolysis with force generation (Kishino and Yanagida 1988; Toyoshima et al. 1987).
Components of a Myosin-S1 Molecule
The first structure of the myosin-S1 was solved by X-ray crystallography (Rayment et al. 1993). Subsequent analyses of myosin motor domain crystal structures with different nucleotide analogues in their clefts (Dominguez et al. 1998; Fisher et al. 1995b; Houdusse et al. 1999; Houdusse et al. 2000; Rayment et al. 1993) revealed four major subdomains of myosin along with their connecting elements, which are depicted in Fig. 14.4f. The motor domain of myosin-S1 consists of a central 50 kDa subdomain divided into upper (U50) (Fig. 14.4f, blue) and lower (L50) (Fig. 14.4f, tan) halves, followed by the 25 kDa N-terminal (N-term) subdomain (Fig. 14.4f, gray). Conserved secondary structural elements on the U50 and L50 surfaces constitute the actin-binding interface (Fig. 14.4f, square bracket). A short linear element known as the strut (Fig. 14.4f, magenta) spans the U50–L50 cleft and assists its closure during myosin’s strong binding to actin (Fujita-Becker et al. 2006; Sasaki et al. 2000). At the site of convergence between all three subdomains lies the so-called active ATP-binding site (Fig. 14.4f, red circle, nucleotide-free state is shown). It resides next to the transducer, which is comprised of the seven-stranded β-sheet (Fig. 14.4f, cyan) and its associated loop 1 (Fig. 14.4f, orange) positioned between the U50 and N-term. The active site elements that bind and coordinate ATP are switch I (Fig. 14.4g, purple), switch II (Fig. 14.4g, brown), and the P-loop (Fig. 14.4g, dark green). Structural coupling between the actin-binding region (Fig. 14.4f, square bracket), active site (Fig. 14.4f, red circle), and the lever arm (Fig. 14.4d, curved bracket) is mediated by several myosin elements (Houdusse et al. 2000). The strut (Fig. 14.4f, magenta) links the U50 and L50 actin-binding subdomains together. Switch II, involved in nucleotide binding (Fig. 14.4f, brown), connects the transducer domain (Fig. 14.4f, cyan) with the relay helix (Fig. 14.4f, yellow). The relay helix (Fig. 14.4f, yellow) connects the actin-binding L50 (Fig. 14.4f, tan) with the converter domain (Fig. 14.4f, green). The SH1 helix (Fig. 14.4f, red) bridges the N-term of the motor domain (Fig. 14.4f, gray) with the converter domain at the lever arm base (Fig. 14.4f, green). The mechanism of the allosteric coupling between these elements is discussed below.
The C-terminus of the converter domain gives rise to an alpha-helical extension known as the lever arm helix or “neck” region (Fig. 14.4f, salmon). The neck is also referred to as the light chain-binding domain (LCBD). Each myosin isoform’s LCBD binds its light chains via IQ motifs (Fig. 14.4a, green), whose name derives from the isoleucine (I)-glutamine (Q) repeat at the start of their consensus sequence. Sequence variations within these IQ motifs determine the type of the attached light chains (reviewed in (Heissler and Sellers 2014)). Muscle myosins possess a calcium-binding essential light chain (ELC) proximal to the converter (Fig. 14.4f, plum) and a phosphorylation-dependent regulatory light chain (RLC) more distal from the converter (Fig. 14.4f, olive). RLC phosphorylation by a tissue-specific myosin light chain kinase plays an important role for smooth muscle activation (Driska et al. 1981; Pearson et al. 1984). RLC phosphorylation triggers relaxed smooth muscle myosin heads in the “OFF” state to release from the thick filament backbone and become available for cross-bridge formation (Yang et al. 2019) (Fig. 14.4h). RLC phosphorylation can also contribute to activation of the striated muscle myosins (Woodhead et al. 2013; Zhao et al. 2009). “Unconventional” non-muscle myosins exhibit more variability in both their quantity and type of bound light chains (Heissler and Sellers 2014). For example, the neck region of myosin Va is capable of associating with ELCs or calmodulin (CaM), but not RLCs (De La Cruz et al. 2000). CaM light chains regulate myosin Va activity in a calcium-dependent manner (Wang et al. 2004).
The Molecular Mechanisms of the Actomyosin Cross-Bridge Cycle
Overview of the Actomyosin Cross-Bridge Cycle
The actomyosin cross-bridge cycle (Fig. 14.5a) relies on the allosteric coupling between the U50 (Fig. 14.4f, blue) and L50 (Fig. 14.4f, tan) actin-binding subdomains, ATP-binding active site (Fig. 14.4f, red circle), and the lever arm (Fig. 14.4f, curved bracket). This coordinated cross-talk, spanning across the entire myosin-S1, ensures that the biochemical state of the active site (i.e., nucleotide-free, or ATP, ADP.Pi, and ADP-bound) determines the structural conformation of the actin-binding subdomains and the lever arm (reviewed (Houdusse and Sweeney 2016)). The completion of myosin’s force-generating powerstroke results in the formation of its so-called rigor interface with actin (Fig. 14.5a, step 1). In this state with the greatest actin affinity, the actin-binding cleft is fully closed (Fig. 14.5b, magenta arrow), the nucleotide-binding active site is empty, and the lever arm occupies its “down” position (Fig. 14.5b, green arrow) (Coureux et al. 2003; Lorenz and Holmes 2010). Execution of a subsequent powerstroke requires ATP binding to myosin. ATP binding weakens the actin-myosin interaction by opening the actin-binding cleft (Fig. 14.5c, magenta arrow) such that the two proteins no longer associate (Conibear et al. 2003) (Fig. 14.5a, light blue arrow), while the lever arm maintains its rigor configuration (Fig. 14.5c, green arrow) resulting in a post-rigor state (Fig. 14.5a, step 2) (Coureux et al. 2004). The next part of the cycle is called a recovery stroke (Fig. 14.5a, dark blue arrow),which is associated with the hydrolysis of ATP into ADP and Pi and reversal of the myosin lever arm (Fig. 14.5d, green arrow) to its Pre-powerstroke state (Fischer et al. 2005; Lombardi et al. 1995; Suzuki et al. 1998) (Fig. 14.5a, step 3). The Pre-powerstroke state is very stable in the absence of actin due to intrinsically slow release of the ADP and Pi. Thus, the Pre-powerstroke state traps ADP and Pi within the myosin active site until formation of the actomyosin complex (Fisher et al. 1995a; Houdusse et al. 2000). The Pre-powerstroke state first associates with actin via electrostatic steering, forming a weakly-bound actomyosin complex that can adopt various configurations (Thomas et al. 1995) (Fig. 14.5a, step 4). This initial association presumably gives rise to the phosphate-release state (PiR) in which Pi leaves the active site (Llinas et al. 2015) (Fig. 14.5a, step 5). PiR state isomerizes into a stereospecific actomyosin complex, which increases the affinity of the two proteins for each other due to the actin-binding cleft closure, and leads to the Pi release and a major lever arm swing (Bershitsky et al. 1997; Eisenberg and Hill 1985; Ferenczi et al. 2005; Houdusse and Sweeney 2016; Kraft et al. 2005; Llinas et al. 2015; Robert-Paganin et al. 2020) (Fig. 14.5a, step 6). These coupled allosteric changes lead to attainment of the strongly bound ADP state (Fig. 14.5a, step 7). The final part of the force-generating powerstroke takes place upon ADP release and is accompanied by a minor lever arm swing (Capitanio et al. 2006; Veigel et al. 1999; Wulf et al. 2016). With myosin strongly bound to actin in a nucleotide-free state, it has again achieved the rigor state (Fig. 14.5a, step 1) and successfully completed a powerstroke. In the following sections, we will discuss those steps in detail.
ATP-Induced Dissociation of Rigor Actomyosin
Structural studies using X-ray crystals of myosin-S1 with bound ATP homologs (Coureux et al. 2004; Coureux et al. 2003) and biochemical experiments (Conibear et al. 2003; Yengo et al. 2002) firmly established that the transition from the rigor to the post-rigor state (Fig. 14.5a, state (1) to state (2)) results in the opening of the myosin cleft (Fig. 14.5b and c, magenta arrows) and dissociation of myosin from F-actin. Conformational changes in the active site of the motor domain due to ATP binding are allosterically passed through the transducer and HO linker to the actin-binding region (Fig. 14.5e–h). Namely, in the absence of nucleotide, the interactions between the switch I (Fig. 14.4f, purple), switch II (Fig. 14.4f, brown), and the P-loop (Fig. 14.4f, dark green) within the active site (Fig. 14.4g, circled residues) stabilize the closed state of the myosin cleft required for interaction with actin. Entry of ATP (Fig. 14.5e, orange-red) into the empty nucleotide-binding pocket breaks these stabilizing interactions (Coureux et al. 2003; Shuman et al. 2014), which results in transition of the transducer from its “fully twisted” conformation in the rigor state to a “partially untwisted” state in the “post-rigor” state (Fig. 14.5e, transition from black to cyan) (Coureux et al. 2004; Takács et al. 2011; Yang et al. 2007). The alteration of transducer conformation causes a shift in the positioning of the HO linker attached to the N-terminus of the transducer (Fig. 14.5e, transition from black to blue), which in turn tilts the HO helix (Fig. 14.5f, transition from black to light blue). The HO helix (Fig. 14.5b–d, light blue) is a part of the actin-binding U50 domain (Fig. 14.5b–d, blue), hence, its repositioning results in the opening of the myosin cleft (Coureux et al. 2004; Tehver and Thirumalai 2010). The opening of the cleft disrupts the actomyosin interactions that previously held the rigor actomyosin complex.
Recovery Stroke
The current model suggests the following mechanism for transition from the post-rigor to the pre-powerstroke state. During the myosin cleft opening, switch I moves cohesively with U50 from its “open” rigor conformation (Fig. 14.5e, black) to “closed” post-rigor conformation (Fig. 14.5e, purple). This unified movement brings switch I closer to the P-loop (Fig. 14.5e, dark green) and facilitates coordination of the ATP γ-phosphate (Fig. 14.5e, orange-red) (Himmel et al. 2002; Kuhner and Fischer 2011; Reubold et al. 2003). Switch II (Fig. 14.5g, brown) re-forms a salt bridge with switch I in its new conformation, while its glycine residue makes an H-bond with the ATP γ-phosphate (Fig. 14.5g, red lines) (Smith and Rayment 1996). This new “closed” position of switch II (Fig. 14.5g, brown) energetically favors ATP hydrolysis into ADP and Pi (Li and Cui 2004). Since switch II links the active site with the relay helix (Fig. 14.5g, yellow), its movement from “open” to “closed” state results in a cascade of conformational changes involving the relay helix (Fig. 14.5h, transition from black to yellow), its flanking relay loop (Fig. 14.5h, transition from black to gold) and the adjacent SH1 helix (Fig. 14.5h, transition from black to red) (Fischer et al. 2005). As a result of these structural alterations near the interface between myosin motor domain and lever arm, the converter domain (Fig. 14.5d, green) and the attached lever arm (Fig. 14.5d, green arrow) undergo a cumulative ~65° rotation (Fig. 14.5h, black arrow), which completes of the recovery stroke (Blanc et al. 2018; Koppole et al. 2007). The aforementioned closure of switch II also seals the myosin cleft and traps ADP and Pi (Fig. 14.5g, orange-red) in the active site (Fisher et al. 1995b; Houdusse et al. 2000) to protect myosin motor domain from losing its nucleotide before interacting with actin (Shih et al. 2000; Suzuki et al. 1998). ATP-dependent detachment of the myosin molecule from actin and re-priming the lever arm into its pre-powerstroke position is prerequisite for the next powerstroke to occur, which starts from the formation of the weak interactions between the pre-powerstroke myosin molecules and actin.
Initial Actomyosin Association and Pi Release
Due to a lack of actomyosin complex structures for the initial weak-binding state (Fig. 14.5a, step 4), it is impossible to deduce specific actomyosin contacts that mediate it. However, biochemical experiments suggest that the pre-powerstroke state (Fig. 14.6a) forms its initial actomyosin interface via electrostatic interactions involving loop 2 (Fig. 14.6b, red) (Furch et al. 1998; Onishi et al. 2006a), activation-loop (Fig. 14.6b, purple) (Llinas et al. 2015; Varkuti et al. 2012), and to a lesser extent loop 3 (Fig. 14.6b, orange) (Giese and Spudich 1997; Van Dijk et al. 1999). Mutation of conserved lysine residues on loop 2 (Fig. 14.6a, red circles) hinders the rate of initial actomyosin binding (Onishi et al. 2006b), whereas the weak actomyosin state can be strengthened by addition of net positive charge to loop 2 (Furch et al. 1998; Joel et al. 2001). On the actin side of the interface, relocation of negatively charged residues implicated in the weak-binding state (Fig. 14.6c, red and orange circles) does not impact myosin’s progression through its ATPase cycle (Wong et al. 1999). Together, this evidence indicates that initial actomyosin association depends on nonspecific charge complementarity rather than a conserved set of interactions.
In contrast to the ionic interactions maintaining the weak-binding state, the formation of the stereospecific actomyosin interface (Fig. 14.5a, steps 5 and 6) requires both the previously formed electrostatic interactions (Fig. 14.6b and c) and new hydrophobic contacts involving a triplet of residues in the helix-turn-helix (HTH) motif (Fig. 14.6e and f) (Kojima et al. 2001; Onishi et al. 2006a). The structure of the stereospecific actomyosin complex is unknown. Nevertheless, a comprehensive comparison of the cryo-EM structure of rigor actomyosin (Houdusse and Sweeney 2016; von der Ecken et al. 2016) (Fig. 14.5a, step 1) with the crystal structure of myosinin the so-called phosphate-release (Pi-R) state (Fig. 14.5a, step 5) (Llinas et al. 2015) merged with the kinetics data (Muretta et al. 2015) suggests a mechanism of transition from the pre-powerstroke myosin to the stereospecific actin bound state. Loop 2 initiates the interaction of the pre-powerstroke myosin with actin (Furch et al. 1998; Onishi et al. 2006a). The subsequent interaction of the L50 activation-loop (Fig. 14.6b purple), with actin introduces a rotation of the L50 subdomain (Fig. 14.7b, black to tan) that leads to a partial closure of the myosin cleft (Varkuti et al. 2012; von der Ecken et al. 2016) (Fig. 14.6j, PPS to PiR, purple arrow). Due to the rotation of the L50 actin-binding subdomain, switch II moves into its “open” position (Fig. 14.7c, from black to brown) to form a tunnel at the active site’s periphery. This tunnel is comprised of residues (Fig. 14.7c, colored circles) that interact with Pi promoting its departure from the active site (Fig. 14.7c, black Pi to plum Pi transition, marked with orange arrow). Switch I (Fig. 14.7c, purple) and the P-loop (Fig. 14.7c, dark green) are coordinated to ADP (Llinas et al. 2015) (Fig. 14.7b, orange-red), while a kinking of the SH1 helix (Fig. 14.7d, red arrow) forms stabilizing interactions with the relay helix (Fig. 14.7d, yellow) and the N-terminal subdomain to keep the converter/lever arm (Fig. 14.7d, green) in its “primed” pre-powerstroke mode (Llinas et al. 2015). Despite the partial closing of the actin-binding cleft in the Pi-release state (Fig. 14.6j, purple arrow), the actin-binding cleft is still not closed enough to form strong interactions with actin. The current model suggests that the weak actomyosin interactions facilitate the formation of the stereospecific actomyosin complex (Fig. 14.6d–f), which presumably forms right after the Pi dissociation from the active site (Fig. 14.7c, orange arrow) and requires the interaction of the triplet of residues in the HTH motif (Fig. 14.6e, green) with actin residues forming a hydrophobic cavity at the longitudinal actin interface (Fig. 14.6f, green circle) (Varkuti et al. 2012; von der Ecken et al. 2016). The formation of the stereospecific complex promotes the full closure of the U50-L50 cleft (Fig. 14.6j, pink arrow), which places the HCM loop (Fig. 14.6h, cyan) and loop 4 (Fig. 14.6h, yellow) in proximity to their binding sites on actin (Fig. 14.6h–i) (Gurel et al. 2017; von der Ecken et al. 2016). This leads to the formation of the strongly bound ADP actomyosin complex (Fig. 14.5a, step 6). Upon this transition the HO helix moves backward (Fig. 14.7e, from black to blue) from its position in the post-powerstroke state (Fig. 14.5f, light blue). Since the HO helix is linked to the transducer, the transducer (Fig. 14.7f, from black to cyan) and its associated switch I (Fig. 14.7f, from black to purple) also undergo conformational changes that close the Pi-binding tunnel to prevent Pi reentry. Since the aforementioned alterations in the myosin molecule are coupled with the major movement of the converter domain and lever arm (Fig. 14.7g, from black to green) via the straightening of the relay helix (Fig. 14.7g, from black to yellow) (Muretta et al. 2015), the closure of the Pi binding tunnel makes the powerstroke irreversible (gated).
ADP Release and Formation of Rigor Complex
The combination of complete actin-binding cleft closure, Pi release, and major lever arm swing places myosin in its strongly bound ADP state (Fig. 14.5a, step 7). In contrast to the ATP-bound post-rigor state with an open actin-binding cleft, the strong-ADP state features a fully closed cleft (Fig. 14.7h) along with tight coordination of nucleotide (Fig. 14.7i, gray atoms). Release of ADP is the final step required for force generation, thus completing one full actomyosin ATPase cycle and placing myosin back in its rigor state (Fig. 14.5a, step 1). Nucleotide release is accomplished by distortions of the transducer sheets (Fig. 14.7i, from black to cyan) which consequently distance the P-loop (Fig. 14.7i, from black to dark green) from switch 1 (Fig. 14.7i, from black to purple) (Wulf et al. 2016). While the transducer rearrangement of the strong-ADP to rigor transition does not affect the positioning of the U50 (Fig. 14.7h, blue) or L50 (Fig. 14.7h, tan) actin-binding subdomains, it alters the orientation of the relay (Fig. 14.7j, from black to yellow) and SH1 (Fig. 14.7i, from black to red) helices, which results in a minor (~9.5°) lever arm swing (Fig. 14.7j, from black to green) (Wulf et al. 2016).
The interface between the motor domain and the lever arm can influence the ADP release step and its associated lever arm swing. This is demonstrated by myosin Ib, which increases its actin attachment lifetime by 75-fold in response to a 2 pN force. Its remarkable tension sensitivity results from stalling the second lever arm rotation associated with ADP release (Laakso et al. 2008). High-resolution structures of myosin Ib ADP-bound and rigor states unveiled a functionally critical hydrophobic pocket at the junction of the converter and lever arm helix. In the ADP-bound state (Fig. 14.8a), loop 5 of the N-term (Fig. 14.8b, gray) docks within this pocket, thus hindering rotation of the lever arm helix (Fig. 14.8b, green) in the presence of high mechanical loads (Mentes et al. 2018). Upon lever arm rotation (Fig. 14.8c), the N-terminal extension (Fig. 14.8d, pink) of myosin Ib is no longer sterically blocked from this pocket, and its association with the lever arm helix (Fig. 14.8d, green) drives the N-term domain rotation required for ADP release (Mentes et al. 2018). This proposed structural mechanism fits with kinetic data, which demonstrates that deletion of the myosin Ib N-terminal extension delays ADP release nearly tenfold (Shuman et al. 2014). In contrast to the lever arm movement, the actin-binding interface undergoes minimal changes during the strong ADP to rigor transition (Fig. 14.8e) (Gurel et al. 2017; Mentes et al. 2018; Wulf et al. 2016). The specific contacts maintaining the rigor interface have been visualized at near-atomic resolution and are discussed in detail within the following section.
The Structure of the Rigor Complex
Our structural knowledge of the actomyosin complex is limited to the strong ADP (Fig. 14.5a, step 7) and rigor (Fig. 14.5a step 1) states. For the rigor state, several actomyosin complexes have been visualized by cryo-EM at near-atomic resolution, which allowed unambiguous mapping of the side chains of amino acids comprising the main actomyosin interactions (Fig. 14.9a). This set of structures includes cardiac myosin (3.8 Å; (Risi et al. 2021a)) and myosin IIC (3.9 Å; (von der Ecken et al. 2016))—representing the class II myosins—as well as myosin VI (4.6 Å; (Gurel et al. 2017)) and myosin Ib (3.9 Å; (Mentes et al. 2018))—representing the “unconventional” myosins. Comparison of these four isoforms altogether reveals that in the Rigor state, the actin-binding elements (Fig. 14.9a, primary colors) of myosin (Fig. 14.9a, plum) generally interact with SD1 and SD3 of the upper actin (Fig. 14.9a, tan) as well as SD2 and SD1 of the lower actin (Fig. 14.9a, gray). The core of the “actin footprint” shared by numerous myosins is formed by interactions with the CM loop (Fig. 14.9b, blue circles), HTH motif (Fig. 14.9b, green circles), and loop 2 (Fig. 14.9b, red circles) that are responsible for global positioning of the motor on its actin track. Peripheral contributions from loop 4 (Fig. 14.9b, yellow circles) and loop 3 (Fig. 14.9b, orange circles), which are variable among the myosin isoforms, can optimize the specific details of the actomyosin interaction. By examining the actin side of the interface (Fig. 14.9b, detailed in Figs. 14.10, 14.11, 14.12, 14.13, and 14.14), one can clearly observe a consistent “zone” of actin interactions across the isoforms despite the variations of the participating myosin surface elements.
Loop 2 (Fig. 14.9a, red) exhibits substantial variations in length and flexibility among myosin isoforms, as demonstrated by the cryo-EM structures (Fig. 14.10a–d). Positively charged residues of loop 2 form the initial actomyosin interactions (Fig. 14.6b, c) (Furch et al. 1998; Onishi et al. 2006a). Interestingly, for all examined myosin isoforms except cardiac, these ionic bonds also exist in the rigor state. Basic residues of loop 2 in myosins IIC, VI, and Ib interact with acidic patches within actin SD1 (Fig. 14.10b–d, blue circles). Additionally, in myosin IIC a hydrophobic cluster of residues at the loop 2 base interacts with the “hinge” region between SD1 and SD3 (Fig. 14.10b, purple circles). These hydrophobic interactions may also exist for myosin VI but cannot be confirmed due to structural variability of its loop 2 (Gurel et al. 2017). Myosin Ib loop 2 can also hydrophobically interact with actin, due to a unique leucine residue located next to the conserved positively charged region (Fig. 14.10d, purple circles). Loop 2 of cardiac myosin displays attenuated actin interactions relative to the other isoforms as a single hydrogen bond with actin residue maintains this interface (Fig. 14.10a, brown circles).
After the initial actin interactions with loop 2 have formed, the HTH (Fig. 14.9a, green) is brought close to its binding site at actin’s hydrophobic groove (Fig. 14.6f, green circle) with assistance from the activation loop (Fig. 14.6e, purple). This process is critical for the transition from a weakly bound to stereospecific actomyosin complex, which in turn facilitates the structural transitions that bring the complex into its rigor state. In sharp contrast to the variability displayed by loop 2, the HTH motif represents the most conserved part of the actomyosin interface. In the HTH of all four myosin isoforms, a conserved glutamic acid residue in the N-terminal helix forms an H-bond with actin SD1 (Fig. 14.11a–d, brown circles). Additionally, all isoforms except myosin Ib feature hydrophobic interactions of the HTH turn with upper actin SD1 and SD3 and the lower actin’s D-loop (Fig. 14.11a–c, purple circles). Biochemical mutagenesis studies have confirmed the importance of these conserved hydrophobic residues for myosin’s ATPase activity and motility (Onishi et al. 2006a). For myosin Ib, the HTH interface lacks hydrophobic interactions, which are substituted by a set of hydrogen bonds (Fig. 14.11d, brown squares and triangles). Similar to myosin IIC, the Ib isoform makes a salt bridge with the D-loop (Fig. 14.11d, blue circles).
The transition from the weakly bound myosin to higher affinity actomyosin complexes (e.g., strong ADP and rigor) involves a rotation of the U50 that closes the actin-binding cleft. This U50 movement brings the CM loop (Fig. 14.9a, blue) into position to form several key interactions characteristic to the rigor state. The class II myosins exhibit very similar interfaces of their CM loops with actin, primarily governed by a trio of hydrophobic residues on the antiparallel β-sheets (Fig. 14.12a–b, purple circles). Additional stabilization at the base of the CM loop is provided by electrostatic contact of a conserved lysine residue with a pair of negatively charged residues at the junction of SD1 and SD3 (Fig. 14.12a–b, blue circles). Myosin IIC contains an isoform-specific salt bridge at the CM loop tip, which associates with the region near the SD1–SD2 junction (Fig. 14.12b, blue squares). The myosin VI CM loop possesses a nearly identical actin footprint to the class II myosins, despite the difference in the specific contacts that form this interface. The hydrophobic interactions are clustered at the tip of the loop (Fig. 14.12c, purple circles), while an electrostatic interaction also exists in the base but on the opposite strand (Fig. 14.12c, blue circles). In contrast to the multiple interactions sustaining these CM loop interfaces, a single glutamic acid of myosin Ib is responsible for its CM loop interaction with a nucleotide-coordinating lysine residue of actin (Fig. 14.12d, blue circles). This CM loop residue also serves as a phosphorylation site important for the activation of class I myosins (Bement and Mooseker 1995).
Loop 2, the HTH motif, and the CM loop are the three myosin surface elements that form the core of its actin interface, which spans across the actin filament’s longitudinal interface. Auxiliary contributions to this core footprint come from loop 4 (Fig. 14.9a, yellow) of the U50 and loop 3 (Fig. 14.9a, orange) of the L50. In the case of loop 4, minimal variability is observed among the actin interfaces of each isoform. For class II myosins, a conserved acidic residue at its tip mediates electrostatic interaction with positively charged actin side chains (Fig. 14.13a, b, blue circles). Furthermore, an arginine residue in both cardiac myosin and myosin IIC (Fig. 14.13a, b, blue squares) forms charged interactions with the tropomyosin (Tm) cable (Fig. 14.9a, black), which blankets the actin filament in numerous cell types and regulates the availability of myosin’s binding sites on actin. For myosin VI, an acidic residue located closer to the loop 4 base interacts with the same basic residue on actin as the class II myosins (Fig. 14.13c, blue circles). The tip of myosin Ib loop 4 interacts with the same zone on actin as observed for class II myosins; however, these contacts are hydrophobic rather than electrostatic (Fig. 14.13d, purple circles).
Unlike the relative conservation displayed by loop 4, myosin isoforms demonstrate great variability in their loop 3 actin interfaces. Loop 3 represents the only actin-binding element that does not interact with the upper actin subunit. For myosin IIC, a pair of basic residues interacts with the negatively charged “Milligan contact” (Fig. 14.14b, blue circles) (Milligan 1996). A different set of charged residues on myosin VI forms electrostatic contacts with a distinct zone on actin that includes the D-loop (Fig. 14.14c, blue squares and triangles). Furthermore, one of these interactions (Fig. 14.14c, blue stars) is formed upon the transition from strong ADP to rigor (Gurel et al. 2017). In contrast to the salt bridges maintaining the loop 3 actin interfaces of myosins IIC and VI, myosin Ib exhibits an assortment of hydrophobic interactions (Fig. 14.14d, purple circles) and H-bonds (Fig. 14.14d, brown circles and squares) with a region just above the Milligan contact. Loop 3 of cardiac myosin represents a dramatic departure from the other isoforms since it does not appear to interact with actin in the rigor state. Instead, a pair of salt bridges between loop 3 and the body of cardiac myosin (Fig. 14.14a, blue circles and squares) keeps it sequestered from the actin interface.
Variations in the Actin-Binding Elements of Various Myosin Isoforms Tune Up Their Kinetic Parameters
A generally conserved blueprint with isoform-specific details maintains the strong actin-binding states of the cross-bridge cycle. The variant sequences and structures of these actin-binding elements between myosin classes contribute to their kinetic properties, as evidenced by altered ATPase cycle kinetics upon chimeric replacement of loop 2 (Uyeda et al. 1994). Thus, these modifications are a source of kinetic fine-tuning during the interaction of myosin motors with a highly conserved actin track, which in turn biases myosin isoforms for certain biological functions (Robert-Paganin et al. 2020; Spudich 1994). Since the strong ADP and rigor actin-binding interfaces are similar, differences in the transducer (Clark et al. 2005; Sweeney et al. 1998) and lever arm (Mentes et al. 2018) are likely the most important for tuning the ADP release step. By contrast, the duration of actin attachment (i.e., duty ratio) and the sliding velocity can be modulated by variant details of the common actin-binding architecture (Robert-Paganin et al. 2020).
The set of isoforms for which high-resolution rigor actomyosin complexes are available represents a mixture of kinetically and functionally diverse myosins, which can be divided into broad groupings based on the parameters of their cross-bridge cycles (reviewed in (Bloemink and Geeves 2011)). The class II myosins serve contractile functions within cells by aggregating into filaments (Fig. 14.4c). However, cardiac myosin moves actin filaments at a velocity that is over an order of magnitude greater than that of myosin IIC (Heissler et al. 2013; Yamashita et al. 1994). While the HTH motif (Fig. 14.11a, b), CM loop (Fig. 14.12a, b), and loop 4 (Fig. 14.13a, b) exhibit largely similar actin interfaces between these two isoforms, significant variability can be observed with respect to loops 2 (Fig. 14.10a, b) and 3 (Fig. 14.14a, b). The reduced interactivity of these elements in cardiac myosin, compared with myosin IIC, would be beneficial for the rapid attachment and detachment of myosin head ensembles. Thus, these differences in the actin-binding interface may contribute to its greater sliding velocity and lower duty ratio. In contrast to this mechanism which depends on short-lived Rigor interactions, the processive myosin VI motor depends on persistent actin attachment of its dimerized heads for its cargo-transporting function (Fig. 14.4d). Accordingly, its duty ratio of 0.9 (i.e., spends 90% of the cross-bridge cycle bound to actin) is among the highest observed in the entire myosin superfamily (De La Cruz et al. 2001; Robblee et al. 2004). Out of all the characterized rigor actomyosin complexes, loop 3 of myosin VI (Fig. 14.14c) possesses the most extensive contacts with the lower actin subunit. This could play a part in the stability of its strong binding to actin, an important component of its processive mechanism in which at least one myosin head is bound to actin at all times (Sweeney et al. 2007). Finally, myosin Ib represents the strain-sensing class I myosins, which can anchor themselves between the actin cytoskeleton and the cell membrane for extended periods in response to mechanical loads (Fig. 14.4b). Myosin Ib dynamically adjusts to an imposed tension by increasing its actin attachment lifetime, such that it transitions from a low (0.2) to high (0.9) duty ratio motor (Laakso et al. 2008). Despite its ability to prolong its actin attachment in response to force, the rigor interface of myosin Ib is notably diminished compared to other isoforms. This is especially true for the CM loop and HTH motif, both integral components of the core interface. Thus, kinetic tuning of myosin Ib for its force-sensing cellular role is likely controlled by elements outside the actin-binding interface, such as its N-terminal extension near the motor domain-lever arm interface (Fig. 14.8a–e, pink) (Mentes et al. 2018; Shuman et al. 2014).
Cellular and Physiological Contexts of Actomyosin Interaction
Muscle Contraction
Although muscle contraction is the biological process typically associated with the actomyosin interactions, it represents a late evolutionary arrival to the functional repertoire of interaction between actin and myosin. Myosin participates in cargo transport and cytoskeletal dynamics in nearly all eukaryotes, and it was adapted for powering large-scale motility of metazoans upon the origin of functional muscle tissue. Striated (i.e., skeletal and cardiac) and smooth muscles differ with respect to the assembly of their contractile apparatuses as well as the regulatory mechanisms governing their contractions. The characteristic functional unit of a striated muscle fiber is the sarcomere, whose lateral boundaries are formed by the Z-lines that anchor myosin-based thick filaments and actin-based thin filaments (Fig. 14.15a). During striated muscle contraction, the thin filaments are pulled toward the M-line at the sarcomere’s center by the formation and detachment of myosin cross-bridges, which consequently reduces the distance between the two Z-lines (Fig. 14.15b). Thus, the molecular basis of striated muscle contraction consists of sarcomeric shortening as the thick and thin filaments slide past each other (Huxley and Hanson 1954). This sliding motion of thick and thin filaments also occurs in the smooth muscle cells found in blood vessels, airways, and the gut. However, their contractile apparatus is not a tightly ordered sarcomere but rather a more flexible lattice of thin filaments and variable-length thick filaments (Liu et al. 2013) interconnected by dense bodies which are functionally equivalent to the Z-disks of striated muscle (Herrera et al. 2005; Zhang et al. 2010).
A functional property mutual to both striated and smooth muscle is their force-velocity (F-V) relationship (Fig. 14.15c), which entails that resistive load applied to muscle decreases its shortening velocity (Hill 1938). For forces greater than the isometric stall force at which no net movement of actin occurs (Fmax), the system reproduced the negative velocity that defines eccentric muscular contraction (Debold et al. 2005). Single-molecule analysis of cardiac actomyosin cross-bridges reveals load dependence of ADP release, and this parallels the inverse relationship between cardiac contractile velocity and external load (Sung et al. 2015). However, the degree of coupling between load and ADP release for β-cardiac myosin (ventricular isoform) is far less than that of myosin V (Veigel et al. 2005) or myosin Ib (Laakso et al. 2008), and this likely contributes to cardiac muscle’s efficient systolic power output against the resistance of ventricular filling (Greenberg et al. 2014). Compared to striated muscle, smooth muscle exhibits one-tenth the maximum shortening velocity (Vmax) (Warshaw et al. 1990) and three- to fourfold greater force development under maximal load (Harris et al. 1994). The higher duty ratio of smooth muscle myosin is the biochemical basis of these mechanical differences (Guilford et al. 1997). In tissues with a mixture of different muscle myosin isoforms, the cross-bridges of the slower isoform limit the velocity of the faster ones by exerting a load on them (Warshaw et al. 1990).
In addition to variations in the contractile apparatus structure and F-V relationship, smooth and striated muscles also differ with respect to their functional regulatory mechanisms. Smooth muscle activation is achieved by phosphorylation of Ser19 within its RLC by a smooth muscle-specific myosin light chain kinase (Pearson et al. 1984) (Fig. 14.4h). RLC phosphorylation triggers relaxed myosin heads in the “off” state (i.e., interacting heads motif or IHM configuration) to release from the thick filament backbone and become available for cross-bridge formation. RLC phosphorylation can also release striated muscle myosins from the relaxed IHM state (Zhao et al. 2009). However, due to an additional regulatory layer contained in skeletal and cardiac thin filaments, RLC phosphorylation only serves a modulatory role. In striated muscle, the accessibility of myosin’s binding sites on actin filaments is controlled by Ca2+ binding to the tropomyosin-troponin complex (Drabikowski et al. 1968; Ebashi 1972; Lehrer and Morris 1982; Martyn et al. 2001). Together, actin and its regulatory apparatus are referred to as the thin filament (Fig. 14.16a, b). The tropomyosin (Tm) cable is a double-stranded α-helical coiled-coil that wraps around actin filaments (Fig. 14.16a, b, blue ribbons) in a diverse array of cell types (Brown et al. 2001; Parry 1975). The Tm cable is associated with the calcium-sensing troponin complex (Fig. 14.16a, b, green, red, and purple ribbons) spaced at intervals of every seven actin subunits. Early kinetic experiments established that Tm sterically blocks actomyosin interactions in the absence of Ca2+, whereas the presence of Ca2+ increases the proportion of activated thin filaments capable of binding myosin (McKillop and Geeves 1993).
Recent cryo-EM studies of both native and reconstituted cardiac thin filaments have clarified the molecular details of Ca2+-mediated thin filament regulation (Risi et al. 2021b; Yamada et al. 2020). Structural changes of troponin (Tn) mechanistically link Ca2+ levels with the position of the Tm cable. When a Ca2+ ion binds to the TnC subunit (Fig. 14.16a and b, purple), the C-terminal part of the TnI subunit (Fig. 14.16a and b, green) releases from the actin filament (Fig. 14.16b, green dotted arrow) and its “regulatory switch” helix binds TnC cleft that was opened by a Ca2+ ion (Fig. 14.16b, yellow arrow). This conformational change liberates the Tm cable (Fig. 14.16a and b, blue) so that it can azimuthally rotate along with the N-terminal portion of TnT (Fig. 14.16a red arrowhead) in order to permit actomyosin interactions (Risi et al. 2021b; Yamada et al. 2020). At low Ca2+ levels, the positioning of Tm on actin subunits sterically hinders myosin from binding to its interaction sites on the actin filament (Fig. 14.16c). At permissive Ca2+ concentrations, the Tm rolls away from the myosin binding sites on four out of six actins so that those actin subunits are accessible to myosin binding (Fig. 14.16d) (Risi et al. 2021b; Yamada et al. 2020). A recent cryo-EM study of the native cardiac thin filament at systolic Ca2+ concentration revealed a primarily stochastic binding of Ca2+ ions to the Tn complex along the thin filament (Risi et al. 2021b). This suggests that during the systolic phase of the heartbeat, the Ca2+ influx randomly activates sections of the thin filament, providing myosin heads with equal opportunity to bind at various locations. Both myosin RLC phosphorylation and Ca2+-mediated thin filament activation have distinct regulatory contributions to a property of cardiac muscle known as length-dependent activation (LDA). Also known as the Frank-Starling law, the principle of LDA states that with increased length, cardiac myofilaments exhibit greater force development and calcium sensitivity (Allen and Kentish 1985; Dobesh et al. 2002). Upon cardiac sarcomere stretching, liberation of myosin heads from their folded-back conformation on the thick filament underlies elevated force development, whereas increased Ca2+ sensitivity derives from structural changes to the regulatory Tn complex of the thin filament (Zhang et al. 2017).
Myosin-binding protein C (MyBP-C) (Fig. 14.16e) represents another striated muscle-specific regulatory layer for managing the actomyosin interaction. This unique protein comprised of ten domains (Fig. 14.16e) cross-links thin and thick filamentous systems in the sarcomere (Luther et al. 2011). The consensus from studies of the cardiac form of MyBP-C establishes that while it is not essential for assembly and stability of the sarcomere (Harris et al. 2002), its interactions with both thin and thick filaments modulate the rate and force of cardiac contractions (reviewed in (Moss et al. 2015)). Depending on the sarcomeric calcium level, cMyBP-C appears to possess dual functionality with respect to cross-bridge modulation. At low calcium, cMyBP-C enhances the activation of the thin filament (Previs et al. 2015; Razumova et al. 2008; Razumova et al. 2006) and myosin binding (Inchingolo et al. 2019). The structural basis for enhanced thin filament activation presumably derives from an electrostatic interaction between the C1 domain in the cMyBP-C N-terminal region and the Tm cable, which activates cardiac thin filaments (Fig. 14.16f and g) (Risi et al. 2018). At high Ca2+, the role of cMyBP-C transforms into inhibition of cross-bridge formation and sliding velocity, as it binds in clusters to the thin filament and thus blocks myosin’s access to its binding sites (Inchingolo et al. 2019; Previs et al. 2016). Much like sarcomeric Ca2+ concentration, phosphorylation of MyBP-C exerts regulatory control over actomyosin cross-bridges. Phosphorylation of MyBP-C M-domain relieves MyBP-C binding to the S2 region of inactive myosin heads (Gruen et al. 1999) and is an important part of contractile regulation (Nag et al. 2017). High Ca2+ is required for the phosphorylated MyBP-C to activate the thin filament (Colson et al. 2016; Previs et al. 2016).
Cargo Transport
In contrast to the ensemble of low-duty ratio myosin motors responsible for muscle contraction, cargo motility along actin filaments utilizes higher-duty ratio processive myosins that can fulfill their biological function as a single monomer or dimer. Myosin X (Fig. 14.17a, labeled (1)), which moves in large side steps along actin bundles, transports cargoes with important functional roles in nervous system development. Spatial patterning of the embryonic nervous system depends on morphogen gradients, transmitted between cells by specialized actin bundles known as cytonemes (Kornberg and Roy 2014). Myosin X motility along these bundles enables the transport of the morphogens Sonic hedgehog (Shh) in chick embryos (Sanders et al. 2013) and Wnt in zebrafish embryos (Stanganello et al. 2015) (Fig. 14.17b). Consistently, mice with myosin X knocked out exhibit alterations to the Shh gradient within the embryonic neural tube (Hall et al. 2021). Myosin-based cargo transport can also regulate synaptic plasticity in the adult nervous system. Myosin V (Fig. 14.17a, labeled (2)) travels on F-actin from the minus to the plus end (Fig. 14.17c, black arrow). It delivers AMPA glutamate receptors from the cytosol to the dendritic spines in hippocampal neurons, thus facilitating long-term potentiation (LTP) (Fig. 14.17c) (Correia et al. 2008). Whereas LTP enhances synaptic connectivity, its opposing process known as long-term depression (LTD) reduces synaptic connectivity. The myosin VI motor (Fig. 14.17a, labeled (3)), which exhibits unique directionality toward the minus end of actin (Fig. 14.17d, black arrow), is well-suited to carry out LTD. It can transport AMPA receptors from the membrane (plus end) to the neuron interior (minus end) via clathrin-mediated endocytosis (Fig. 14.17d) (Wagner et al. 2019).
Myosin motors also move entire organelles along the actin cytoskeleton. The metazoan-specific myosin XIX (Fig. 14.17a, labeled (4)) is engineered for mitochondrial transport, as its tail domain contains specific elements that recruit it to these organelles (Fig. 14.17e) (Quintero et al. 2009). These features include a lipid-binding motif that targets the outer mitochondrial membrane (Fig. 14.17e, pink oval) (Hawthorne et al. 2016) and a region which specifies binding to the mitochondrial surface proteins Miro1/2 (Fig. 14.17e, purple triangle) (Oeding et al. 2018). Myosin XIX-driven mitochondrial motility is essential for proper execution of mitosis, as it ensures the delivery of an equal number of organelles to each daughter cell (Rohn et al. 2014). While myosin XIX handles the transport of healthy functional mitochondria (Fig. 14.17e), myosin VI has been found to interact with dysfunctional mitochondria and regulate a key quality control pathway. Damaged mitochondria (Fig. 14.17f, blue ovals) express the ubiquitin ligase parkin (Fig. 14.17f, gray triangles) on their outer membrane. Parkin tags the outer mitochondrial membrane proteins with ubiquitin (green diamonds), which in turn acts as a recruitment signal for myosin VI to bind and deposit the organelles within assembled F-actin cages (Fig. 14.17f, brown), effectively isolating them from the internal cellular environment (Kruppa et al. 2018). The well-studied processive myosin V motor has also several organelle transport functions characterized in a variety of eukaryotes. Delivery of organelle cargoes to the budding daughter cells in yeast depends on their binding to specific adaptor proteins which can be recognized by the class myosin V tail. Different adaptors facilitate myosin V-mediated transport of vacuoles (Ishikawa et al. 2003), peroxisomes (Fagarasanu et al. 2006), and trans-Golgi vesicles (Lipatova et al. 2008). Since yeast class V myosins are less processive than their vertebrate counterparts (Reck-Peterson et al. 2001), multiple myosin V motors are required to rapidly transport cargo to active growth sites in yeast (Donovan and Bretscher 2012). In vertebrates, class V myosins transport organelles in a multitude of physiological contexts, from the melanosomes involved in skin and hair pigmentation (Wu et al. 2002) to the endoplasmic reticulum in cerebellar neurons that mediates synaptic plasticity (Wagner et al. 2011).
Tension Sensing
The regulation of plasma membrane tension is essential for proper cellular function, as it links mechanical stimuli to biochemical responses. Class I myosins are poised to act as tension sensors due to their conserved TH1 tail domains, which can bind phospholipids and thus link the plasma membrane to the internal cytoskeleton bound by the motor domain (reviewed in (McConnell and Tyska 2010)). The total tension of the plasma membrane is largely determined by the molecular interfaces, such as myosins, that adhere it to the cytoskeleton (Sheetz 2001). Myosin Ia supports biomechanical interaction between membrane and cytoskeleton in the brush border of intestinal epithelial cells (Nambiar et al. 2009). Loss of myosin Ia destabilizes the brush border architecture (Tyska et al. 2005).
The extreme tension sensitivity of myosin Ib (Fig. 14.18a) allows it to facilitate the extension of membrane tubules at endosomes and the trans-Golgi network (Laakso et al. 2008). As this process involves an increase in membrane tension, the catch-bond behavior of myosin Ib allows it to remain attached to the tubule while elongating it at a constant velocity along an actin filament (Fig. 14.18b) (Yamada et al. 2014). The force sensitivity of myosin Ib is dramatically abrogated in the presence of Ca2+. It accelerates myosin Ib detachment from actin at 1 pN of force by 19-fold, due to reduction of the working stroke distance required to induce ADP release (Lewis et al. 2012). The less force-sensitive myosin Ic (Greenberg et al. 2012) also has the lifetime of its detached state increased by Ca2+ addition, though in this case Ca2+ exerts its effect primarily via deceleration of ATP hydrolysis (Adamek et al. 2008). The response of myosin Ic to Ca2+suits it for its biological role in sensory adaptation within the inner ear’s hair cells, a process intimately dependent on calcium transients. Myosin Ic links the transduction channels through which Ca2+ ions pass to the actin bundles within the hair cells known as stereocilia. An extracellular tip link connects the ion channel associated with one stereocilia bundle to its neighboring bundle. Auditory stimuli increase tension in the tip links and leads to subsequent Ca2+ influx through the transduction channels. The myosin Ic-transduction channel complex dynamically adjusts to tip link tension and elevated calcium by undergoing displacement along the stereocilia to restore resting tension levels (Batters et al. 2004; Holt et al. 2002). Thus, dual Ca2+ and tension sensitivity of myosin Ic allows it to mechanically transduce stimuli applied to the hair cells.
Cytoskeletal Remodeling and Motility
Motility of single cell eukaryotes via actin cytoskeleton remodeling was one of the primordial functions of the non-muscle class II myosins (Fig. 14.18c), and it has been adopted by numerous motile cell types within complex multicellular eukaryotes. Cellular locomotion consists of two distinct phases, differentiated by the relative involvement of actin and myosin (Chen 1981; Lauffenburger and Horwitz 1996). The first phase involves extension of the cell’s leading edge, and this is mainly determined by actin polymerization dynamics independent of myosin (Fig. 14.2b–d). Accordingly, leading edge extension is not affected by myosin null mutations in Dictyostelium (Wessels et al. 1991). Once the membrane protrusion has adhered to the cellular substratum, myosin-mediated contractility behind the leading edge generates the force needed to propel the cell body forward. In the amoeboid Dictyostelium, myosin II undergoes dynamic polarized redistribution to the rear of a cell moving toward a chemotactic stimulus (Yumura 1996). This same model organism also demonstrates that during cytokinesis (Fig. 14.18d), myosin localizes to the contractile ring at the cell equator in order to promote daughter cell segregation. Studies of this phenomenon in mammalian cells reveals that the non-muscle class II myosins contain motifs within their tails that mediate recruitment to the cleavage furrow as well as incorporation into preexisting myosin II filaments at the furrow (Beach and Egelhoff 2009). Parallels between amoebal and mammalian cytoskeletal dynamics can also be observed in motile immune cells. The T-cell class of lymphocytes depends on migration through the vascular endothelial wall in order to reach infected tissues and exert its effect or functions. As in Dictyostelium, leading edge extension occurs independently of myosin activity, given that T cells lacking myosin IIA can squeeze their membrane protrusions through the endothelial barrier. However, myosin IIA contractile activity is required for complete extravasation of the T cell through the endothelium (Jacobelli et al. 2013).
Conclusion and Future Perspectives
The actomyosin interaction originated in unicellular eukaryotes as a mechanism governing motility at the cellular scale, and the emergence of eukaryotic complexity coincided with functional diversification of the myosin superfamily. Consequently, myosin plays a functional role in nearly all tissues of a typical multicellular eukaryote. The structural features of each myosin class were adapted to their distinct cellular duties (Fig. 14.4b–e and Figs. 14.17 and 14.18), which form the molecular basis of diverse physiological processes such as nervous system development, intestinal absorption, and immune cell migration. Thus, eukaryotic evolution generated a protein family with a conserved structural blueprint and kinetic cycle. Fine-tuning was accomplished via sequence divergence of certain motifs, which altered the rate and equilibrium constants of the ATPase cycle (reviewed in (De La Cruz and Ostap 2004)). Consequently, the myosin superfamily members possess variations in their actin sliding velocities by a factor of 300 and in actin-activated ATPase activity by a factor of 3000, despite the general conservation of the motor domain architecture responsible for actin binding and ATP hydrolysis (Heissler and Sellers 2016).
Myosin is a catalytic molecular machine governed by allosteric communication between three major regions: the actin-binding interface, nucleotide-binding pocket, and force-generating lever arm (Figs. 14.5, 14.6, and 14.7). Thus, isoform-specific changes in any of these regions tune up the overall functionality of the myosin enzyme to a particular cellular task. For example, a class XI myosin from the algal species Chara corallina possesses a unique charge distribution of actin-binding loops 2 and 3 and as a result exhibits an exceptionally fast velocity ten times greater than that of fast skeletal muscle myosin (Ito et al. 2007). Despite sharing a similar general mechanism of processively translocating actin filaments, myosins from classes V, VI, and X have distinct lever arm and tail domain architectures (Fig. 14.17). This diversity endows processive myosins with varied step sizes and directionality, with parallel variability in their motor domains and mechanochemical cycle parameters. The reverse directionality of myosin VI, conferred by a class-specific lever arm insert, necessitates a different gating mechanism for its lead head than myosin V. Gating of myosin VI processivity relies on another unique insert, located in its motor domain near the nucleotide-binding site (Sweeney et al. 2007). In the case of myosin X, its tail architecture is the primary reason behind its selectivity for actin bundles, although chimeric replacement of its motor domain with that of myosin V reveals that the head also confers some of this behavior (Nagy et al. 2010). The extensive menagerie of myosin motors is punctuated by remarkable feats of conservation such as the IHM state of muscle myosin autoinhibition, governed by residues that have largely resisted variation for nearly 800 Myrs of metazoan evolution (Alamo et al. 2016). This regulatory mechanism dates back to the primitive muscular system of jellyfish (Lee et al. 2018).
Molecular disparities among myosins are largely responsible for the varied actomyosin interactions in physiological contexts, as the evolution of the actin superfamily has proceeded along a much less divergent trajectory. The exceptional conservation of actin is apparent when comparing evolutionarily distant eukaryotic species, given the ~90% identity between yeast and mammalian cytoplasmic actins (Galkin et al. 2002). Despite the clear differences between myosin and actin evolution, these two protein partners can be united under the umbrella of allostery. Structural polymorphism of F-actin manifests itself in multiple conformations of the D-loop (Merino et al. 2018; Pospich et al. 2020) and an allosteric coupling of its structural state with the structural state of the N- and C-termini of actin (Galkin et al. 2010). Based on the extreme conservation of internally buried residues within actin monomers and filaments, it seems reasonable that the conformational flexibility of actin filaments has provided the impetus for preserving the internal allosteric networks that is used by the myosin motors. This notion has a strong experimental support, since cross-linking of the two actin mobile elements (e.g., the D-loop and the C-terminus), completely abolishes force generation while allowing actomyosin interaction (Kim et al. 1998).
Overall, the very different evolutionary path was of myosin and actin forced the diverse family of myosin motors to use a very similar track on the surface of the evolutionary conserved actin filament (Robert-Paganin et al. 2020). This idea is beautifully illustrated by recently published cryo-EM structures of several quite diverse actomyosin complexes (Gurel et al. 2017; Mentes et al. 2018; Risi et al. 2021a; von der Ecken et al. 2016). In these complexes despite a very similar overall geometry of the actomyosin interface, the interaction of individual myosin actin binding elements differs between the isoforms (Figs. 14.10, 14.11, 14.12, 14.13, and 14.14). However, these structures were obtained only for the rigor state representing the end of the powerstroke (Fig. 14.5a, step 1). Therefore, near-atomic structures of the weakly bound states (Fig. 14.5a, steps 4 and 5) of various actomyosin complexes are required to achieve a full molecular description of the myosin mechanochemical cycle.
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Pepper, I., Galkin, V.E. (2022). Actomyosin Complex. In: Harris, J.R., Marles-Wright, J. (eds) Macromolecular Protein Complexes IV. Subcellular Biochemistry, vol 99. Springer, Cham. https://doi.org/10.1007/978-3-031-00793-4_14
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