Summary
Increased urinary 3-methylglutaconic acid excretion is a relatively common finding in inborn errors of metabolism, especially in mitochondrial disorders. In most cases 3-methylglutaconic acid is only slightly elevated and accompanied by other (disease-specific) metabolites.
There is, however, a group of disorders with significantly and consistently increased 3-methylglutaconic acid excretion, where the 3-methylglutaconic aciduria is a hallmark of the phenotype and the key to diagnosis: inborn errors with 3-methylglutaconic aciduria as a discriminative feature (3-MGA-IEM). One should distinguish between “primary 3-methylglutaconic acidurias” formerly known as type I (3-methylglutaconyl-CoA hydratase deficiency, AUH defect) due to defective leucine catabolism and the—currently known— 11 “secondary 3-methylglutaconic acidurias.” The latter should be further classified and named by their defective protein or the historical name as follows: TAZ-defect or Barth syndrome, SERAC1-defect or MEGDEL syndrome, AGK-defect or Sengers syndrome, OPA3-defect or Costeff syndrome, TMEM70, MICOS13, DNAJC19, TIMM50, and HTRA2 defect.
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Introduction
The branched-chain organic acid 3-methylglutaconic acid (3-MGA) is an intermediate of the mitochondrial leucine catabolism. In the urine of healthy individuals, 3-MGA is found only in traces (<20 mmol/mol creatinine); in young infants it can be higher (up to 30 mmol/mol creatinine) as the creatinine is relatively lower due to lower muscle mass.
In patients with inborn errors with 3-methylglutaconic aciduria as a discriminative feature (3-MGA-IEM), urinary 3-MGA concentrations can (intermittently) rise above 1000 mmol/mol creatinine (Wortmann et al. 2013a, b).
The leucine pathway shows the metabolic pathway of leucine. 3-MGA, 3-methylglutaric acid (3-MG), and 3-hydroxyisovaleric acid (3-HIVA) accumulate when the conversion of 3-methylglutaconyl-CoA to 3-hydroxy-3-methylglutaryl-CoA by the enzyme 3-methylglutaconyl-CoA hydratase (3-MGH, EC 4.2.1.18 encoded by AUH) is disturbed (Fig. 70.1) (Wortmann et al. 2010). This is the primary 3-methylglutaconic aciduria (3-MGA-uria) or AUH-defect, formerly known as 3-MGA-uria type I. The urinary excretion of 3-MGA is generally higher in primary 3-MGA-IEM, AUH defect, than in all other (secondary) 3-MGA-IEM. Patients with AUH defect excrete even higher amounts of urinary 3-MGA after a leucine-rich, or in general a protein-rich, meal (Table 70.12) (Wortmann et al. 2014). This is not the case in all other patients with 3-MGA-uria underlining that the excreted 3-MGA does not originate from leucine degradation. Another distinctive feature between primary and secondary 3-MGA-IEM is the elevation of 3-HIVA which is only seen in the AUH defect.
3-MGA-uria can be frequently seen (3% of all urine samples of patients with suspected IEM) in association with several IEM, such as organic acidurias, glycogen storage disorders, fatty acid oxidation disorders, and urea cycle disorders (Fig. 70.1 classification updated from) (Wortmann et al. 2013a, b). Therefore it is important to repeat urinary organic acid analysis in patients with 3-MGA-uria and to carefully interpret the other general clinical chemistry (blood gas analysis, glucose, lactate, ammonia, full blood counts, etc.) and metabolic screening tests (serum amino acids, acylcarnitines in dried blood spot, oligosaccharides in urine). This will allow to confirm that 3-MGA-uria is only an accompanying finding.
In another group of patients, 3-MGA-uria is only slightly and/or intermittently elevated, and 3-MGA-uria is a minor finding. The majority of patients in this group are patients with mitochondrial disorders where it is detected in about 11% of all patients. It is more frequently seen in ATPase-related disorders, with mitochondrial DNA depletion or deletion (e.g., Pearson syndrome), but not in patients with single respiratory chain complex deficiencies with exception of ATPase-related disorders (Wortmann et al. 2013a, b). As 3-MGA-uria is not found in all of these patients with the mentioned specific mitochondrial disorders, these disorders are discussed and not here.
Once 3-MGA-uria has been proven to be an isolated and consistently present finding, 3-MGA-uria as a major finding, the diagnosis of a 3-MGA-IEM can be made. One subgroup is formed by the disorders involving defective phospholipid biosynthesis (TAZ, SERAC1, AGK) (Clarke SL et al. 2013; Thiels C et al. 2016; Mass RR et al. 2017; Roeben B et al. 2018; Wortmann SB et al. 2015; Wortmann SB et al. 2012; Haghighi A et al. 2014; Mayr JA et al. 2012), all other 3-MGA-IEM share mitochondrial (membrane) dysfunction (OPA3, DNAJC19, CLPB, HTRA2, TIMM50, TMEM70, MIC13, Fig. 70.2) (Anikster et al. 2006; Ucar SK et al. 2017; Davey KM et al. 2006; Pronicka E et al. 2017; Wortmann SB et al. 2015; Kovacs-Nagy R et al. 2018; Shahrour MA et al. 2017; Magner M et al. 2015; Kishita Y et al. 2020). There are no additional (metabolic) clues that can help to further distinguish between the different types of 3-MGA-IEM with exception of the clinical features (see table on differential diagnosis at the section signs and symptoms). All 3-MGA-IEM show a distinctive pattern of signs and symptoms which allows to distinguish between them; however patients affected by the different 3-MGA-IEM show a spectrum within their subtype (Fig. 70.1).
Nomenclature
No. | Disorder_name | Alternative name | Gene symbol | Chromosomal location | Mode of Inheritance | Affected protein | OMIM No. |
---|---|---|---|---|---|---|---|
AUH deficiency | 3-methylglutaconic aciduria type 1 | AUH | 9q22.31 | AR | 3-methylglutaconyl-CoA hydratase | 600529 | |
TAZ deficiency | Barth syndrome; Taffazin deficiency | TAZ | Xq28 | XLR | Taffazin | 300394 | |
SERAC1 deficiency | 3-methylglutaconic aciduria with dystonia, deafness, hepatopathy, encephalopathy, and Leigh-like syndrome (MEGDHEL) | SERAC1 | 6q25.3 | AR | Serine active site-containing protein 1 | 614725 | |
AGK deficiency | Sengers syndrome | AGK | 7q34 | AR | Acylglycerokinase | 212350 | |
OPA3 deficiency | Optic atrophy type 3 (dominant); 3-methylglutaconic aciduria type 3, Costeff syndrome (recessive) | OPA3 | 19q13.2–13.3 | AD, AR | 606580 | ||
DNAJC19 deficiency | Dilated cardiomyopathy with ataxia (DCMA syndrome); 3-methylglutaconic aciduria type 5 | DNAJC19 | 3q26.33 | AR | - DNAJ/HSP40 homolog, subfamily C, member 19 | 608977 | |
CLPB deficiency | 3-methylglutaconic aciduria type 7, with cataracts, neurologic involvement and neutropenia | CLPB | 11q13.4 | AR | - Caseinolytic peptidase B | 616254 | |
HTRA2 deficiency | 3-methylglutaconic aciduria type 8 | HTRA2 | 2p13.1 | AR | - HTRA serine peptidase 2 | 606441 | |
TIMM50 deficiency | 3-methylglutaconic aciduria type 9 | TIMM50 | 19q13.2 | AR | Translocase of inner mitochondrial membrane 50 | 607381 | |
TMEM70 deficiency | Transmembrane protein 70 deficiency | TMEM70 | 8q21.11 | AR | Complex V assembly protein | 612418 | |
MICOS13 deficiency | MICOS complex subunit MIC13 deficiency | MICOS13 | 19p13.3 | AR | MICOS complex, 13-KD subunit | 618329 |
Metabolic Pathways
Signs and Symptoms
AUH-def. | TAZ-def. | SERAC1-def. | AGK-def. | OPA3-def. | DNAJC19-def | CLPB-def. | HTRA2-def. | TIMM50-def. | TMEM70-def. | MIC13-defect | |
---|---|---|---|---|---|---|---|---|---|---|---|
MIM # | 250950 | 302060 | 614739 | 212350 | 258501 | 610198 | 616271 | 617248 | 617698 | 614052 | 618329 |
Gene | AUH | TAZ | SERAC1 | AGK | OPA3 | DNAJC19 | CLPB | HTRA2 | TIMM50 | TMEM70 | MIC13 |
3-MGA-uria | x | x | x | x | x | x | x | x | x | x | x |
Mode of inheritence | AR | XLR | AR | AR | AR | AR | AR | AR | AR | AR | AR |
Typical age at onset | 4-5th decade | Neonatal | Neonatal- first year | Childhood | Childhood | Childhood | Neonatal | Neonatal | Neonatal | Neonatal | Neonatal |
Developmental delay | (x) | x | (x) | x | x | x | x | x | x | x | |
Intellectual disability | x | x | x | x | x | x | x | ||||
Movement disorder | x | x | x | x | x | x | x | ||||
Central hypopnea | x | x | |||||||||
Optic atrophy | (x) | x | |||||||||
Deafness | x | ||||||||||
Epilepsy | (x) | (x) | x | x | |||||||
Cataracts | x | x | x | ||||||||
Cardiomyopathy | x | x | x | x | |||||||
Neutropenia | x | x | x | ||||||||
Growth failure | x | x | x | x | x | x | x | x | x | x | |
Liver involvement | x | x |
Reference Values
Metabolite | Reference value |
---|---|
3-Hydroxyisovaleric acid (U) | 0–25 mmol/mol creatinine (0–2 month) 0–50 mmol/mol creatinine (2 months–2 years) 0–45 mmol/mol creatinine (2–10 years) 0–15 mmol/mol creatinine (10–18 years) 0–20 mmol/mol creatinine (> 18 years) (GCMS, TML laboratory, Radboud university, Nijmegen, NL) |
3-Methylglutaconic acid (U) | 0–20 mmol/mol creatinine (0–2 month) 0–15 mmol/mol creatinine (2 months–2 years) 0–10 mmol/mol creatinine (>2 years) (GCMS, TML laboratory, Radboud university, Nijmegen, NL) |
3-Methylglutaric acid (U) | Absent, if present not quantified (GCMS, TML lab, Radboud University, Nijmegen, NL) |
Pathological Values
Metabolite | Pathological value |
---|---|
3-Methylglutaconic acid (U) | 20–40 mmol/mol creatinine: Suggestive for mitochondrial dysfunction as it can be seen in numerous inborn errors of metabolism > 40 mmol/mol creatinine: Suggestive for inborn error of metabolism with 3-methylglutaconic aciduria as discriminative feature |
Leucine Loading Test
Indication: To distinguish between primary and secondary 3-methylglutaconic aciduria.
Procedure: Collect a urine portion for urinary organic acid analysis and a venous blood sample for serum amino acids. Give 100 mg/kg (max. 6 g) leucine powder orally, and repeat listed investigations 1 h after the leucine gift. Collect a 24-h urine sample for another urinary organic acid analysis.
Interpretation: Table below lists the typical findings before and after leucine loading in several 3-methylglutaconic acidurias. Only in primary 3-MGA_uria due to AU deficiency a clear increase in urinary 3-MGA occurs.
Specimen Collection
Urine for organic acid analysis should be analyzed immediately or frozen at –20 °C.
DNA Testing
All 3-MGA-IEM show a distinctive pattern of signs and symptoms which justifies single gene testing. In less clear presentations, the whole exome or genome sequencing (WES/WGS) is the method of choice. As both point mutations and deletion(s) in the mitochondrial DNA can cause disorders with unspecific 3-methylglutaconic aciduria, one should inquire at the genetic lab and make sure that the genetic test chosen covers these. Leucocyte-derived DNA from 3–5 ml EDTA blood (children, adults) will be enough for all mentioned genetic tests, and WGS can be performed in much less blood even from a dried blood spot.
Treatment Summary
AUH defect is a disorder of leucine catabolism. Acute deteriorations in relation to catabolism as in other intoxication-type IEM has not been described. The clinical manifestation is an adult-onset (fourth decade onwards) slowly progressive leukoencephalopathy with ataxia and spasticity (Wortmann et al. 2010). A leucine-restricted diet or a protein-defined (vegetarian) diet could be considered; data on this are lacking and will be difficult to obtain. In general, only a supportive treatment is available for all 3-MGA-IEM.
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Wortmann, S.B., Mayr, J.A. (2022). 3-Methylglutaconic Acidurias. In: Blau, N., Dionisi Vici, C., Ferreira, C.R., Vianey-Saban, C., van Karnebeek, C.D.M. (eds) Physician's Guide to the Diagnosis, Treatment, and Follow-Up of Inherited Metabolic Diseases. Springer, Cham. https://doi.org/10.1007/978-3-030-67727-5_70
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