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Magnetically Single-Cell Virus Stamping

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Mammalian Cell Engineering

Part of the book series: Methods in Molecular Biology ((MIMB,volume 2312))

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Abstract

Single-cell engineering via virus based genetic manipulation allows the possibility of understanding of complex tissues. However, current delivery methods for the genetic engineering of single cells via viral transduction suffer from limitations that restrict their application. Here I present a protocol describing a precise technique which can be used for the targeted virus infection of single cells in a monolayer of cells that is optically accessible. The protocol, demonstrated here by stamping cultured Hela cells with lentiviruses (LVs), completes in a few minutes and allows stable transgene expression within a few days, at success rates approaching 80%.

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References

  1. Hodzic E (2016) Single-cell analysis: advances and future perspectives. Bosn J Basic Med Sci 16:313–314

    Article  Google Scholar 

  2. Di Carlo D, Tse HT, Gossett DR (2012) Introduction: why analyze single cells? Methods Mol Biol 853:1–10

    Article  Google Scholar 

  3. Stuart T, Satija R (2019) Integrative single-cell analysis. Nat Rev Genet 20(5):257–272

    Article  CAS  Google Scholar 

  4. Fugger L, Friese MA, Bell JI (2009) From genes to function: the next challenge to understanding multiple sclerosis. Nat Rev Immunol 9(6):408–417

    Article  CAS  Google Scholar 

  5. Akhtar A et al (2011) A decade of molecular cell biology: achievements and challenges. Nat Rev Mol Cell Biol 12(10):669–674

    Article  CAS  Google Scholar 

  6. Chari R, Church GM (2017) Beyond editing to writing large genomes. Nat Rev Genet 18(12):749–760

    Article  CAS  Google Scholar 

  7. Lotze MT, Kost TA (2002) Viruses as gene delivery vectors: application to gene function, target validation, and assay development. Cancer Gene Ther 9(8):692–699

    Article  CAS  Google Scholar 

  8. Wang D et al (2019) Adeno-associated virus vector as a platform for gene therapy delivery. Nat Rev Drug Discov 18(5):358–378

    Article  CAS  Google Scholar 

  9. Belousova N et al (2002) Modulation of adenovirus vector tropism via incorporation of polypeptide ligands into the fiber protein. J Virol 76(17):8621–8631

    Article  CAS  Google Scholar 

  10. Uchida E et al (2007) Optimization of the virus concentration method using polyethyleneimine-conjugated magnetic beads and its application to the detection of human hepatitis A, B and C viruses. J Virol Methods 143(1):95–103

    Article  CAS  Google Scholar 

  11. Walther W, Stein U (1996) Cell type specific and inducible promoters for vectors in gene therapy as an approach for cell targeting. J Mol Med (Berl) 74(7):379–392

    Article  CAS  Google Scholar 

  12. Schubert R et al (2019) Magnetically guided virus stamping for the targeted infection of single cells or groups of cells. Nat Protoc 14(11):3205–3219

    Article  CAS  Google Scholar 

  13. Schubert R et al (2018) Virus stamping for targeted single-cell infection in vitro and in vivo. Nat Biotechnol 36(1):81–88

    Article  CAS  Google Scholar 

  14. Judkewitz B et al (2009) Targeted single-cell electroporation of mammalian neurons in vivo. Nat Protoc 4(6):862–869

    Article  CAS  Google Scholar 

  15. Kitamura K et al (2008) Targeted patch-clamp recordings and single-cell electroporation of unlabeled neurons in vivo. Nat Methods 5(1):61–67

    Article  CAS  Google Scholar 

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Acknowledgments

This study was supported by a Burroughs Wellcome Fund grant (ID #1018793 to R.S.)

Competing financial interests: The author declares competing financial interests. The author applied for a patent related to the virus stamping approach.

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Schubert, R. (2021). Magnetically Single-Cell Virus Stamping. In: Kojima, R. (eds) Mammalian Cell Engineering. Methods in Molecular Biology, vol 2312. Humana, New York, NY. https://doi.org/10.1007/978-1-0716-1441-9_20

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  • DOI: https://doi.org/10.1007/978-1-0716-1441-9_20

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  • Publisher Name: Humana, New York, NY

  • Print ISBN: 978-1-0716-1440-2

  • Online ISBN: 978-1-0716-1441-9

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